Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0023
         (300 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77131-3|CAB00855.1|  156|Caenorhabditis elegans Hypothetical pr...    27   1.9  
U37429-12|AAA79353.1|  274|Caenorhabditis elegans Alkylguanine d...    27   2.5  
Z81522-8|CAB04231.2|  786|Caenorhabditis elegans Hypothetical pr...    26   5.8  
Z30215-4|CAA82936.1|  541|Caenorhabditis elegans Hypothetical pr...    26   5.8  
Z68880-4|CAA93093.1|  544|Caenorhabditis elegans Hypothetical pr...    25   7.6  
AL132952-4|CAB61136.1|  185|Caenorhabditis elegans Hypothetical ...    25   7.6  

>Z77131-3|CAB00855.1|  156|Caenorhabditis elegans Hypothetical
           protein C54C6.4 protein.
          Length = 156

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
 Frame = +1

Query: 130 QSLLISYRYRVQLKNL--SSNICRR-TLHTYFLS 222
           + ++I YRYR+QL N+  S  +C   +LH + +S
Sbjct: 76  EHVIIPYRYRIQLSNMPKSPQLCSNLSLHYFCMS 109


>U37429-12|AAA79353.1|  274|Caenorhabditis elegans Alkylguanine dna
           alkyltransferaseprotein 2 protein.
          Length = 274

 Score = 27.1 bits (57), Expect = 2.5
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -2

Query: 299 LRCKPLGIFQRKYIVRQPQP*ILLAHERKYVCNVLLQIFEERFFS 165
           L+ +PL + Q  + VRQP+     +HE   +  VLLQ  +E   S
Sbjct: 59  LQTQPLPVVQPCHPVRQPRESFYSSHEHDPMDEVLLQEVKEEAHS 103


>Z81522-8|CAB04231.2|  786|Caenorhabditis elegans Hypothetical
           protein F32B4.8 protein.
          Length = 786

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 8/17 (47%), Positives = 15/17 (88%)
 Frame = -1

Query: 237 NSISAREEVCVQRSSAN 187
           N +++ E++C+Q+SSAN
Sbjct: 651 NPVTSYEKICIQKSSAN 667


>Z30215-4|CAA82936.1|  541|Caenorhabditis elegans Hypothetical
           protein F40F12.4 protein.
          Length = 541

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 150 QVSSSTEKPFFEYLQKNVAHILPLV 224
           ++ S  EK  F+Y QK+ +H +PL+
Sbjct: 244 RMCSLEEKSSFDYSQKDSSHSIPLI 268


>Z68880-4|CAA93093.1|  544|Caenorhabditis elegans Hypothetical
           protein T14G10.7 protein.
          Length = 544

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -1

Query: 99  LLEMLHL*QHQRTAPTIPLLPMDSCLPLCR 10
           LL ML+    QRTA  IP L +   LP+C+
Sbjct: 501 LLAMLYFPMDQRTAVLIP-LAVPIVLPICK 529


>AL132952-4|CAB61136.1|  185|Caenorhabditis elegans Hypothetical
           protein Y51H4A.4 protein.
          Length = 185

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -1

Query: 201 RSSANIRRKVFQLNSIPVAY*KRLLQPIRCQQQRL 97
           R S   R+KV Q NS+ V Y +R  Q +R   Q+L
Sbjct: 118 RKSRESRKKVDQDNSVRVTYLERENQCLRVYVQQL 152


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,102,910
Number of Sequences: 27780
Number of extensions: 99378
Number of successful extensions: 287
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)