Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0022
(448 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X03747-1|CAA27385.1| 303|Homo sapiens protein ( Human mRNA for ... 53 5e-07
M25160-1|AAA36352.1| 303|Homo sapiens protein ( Human Na,K-ATPa... 53 5e-07
CR407616-1|CAG28544.1| 303|Homo sapiens ATP1B1 protein. 53 5e-07
BT009787-1|AAP88789.1| 303|Homo sapiens ATPase, Na+/K+ transpor... 53 5e-07
BC000006-1|AAH00006.1| 303|Homo sapiens ATPase, Na+/K+ transpor... 53 5e-07
AY946016-1|AAX55911.1| 119|Homo sapiens Na+/K+ transporting ATP... 53 5e-07
AY545986-1|AAT11781.1| 303|Homo sapiens Na,K-ATPase beta 1 subu... 53 5e-07
AL031726-2|CAI18888.1| 303|Homo sapiens ATPase, Na+/K+ transpor... 53 5e-07
U16799-1|AAC50132.1| 301|Homo sapiens Na,K-ATPase beta subunit ... 52 1e-06
U45945-1|AAC50873.1| 290|Homo sapiens Na,K-ATPase beta 2 subuni... 46 4e-05
M81181-1|AAA51805.1| 290|Homo sapiens Na/K-ATPase beta 2 subuni... 45 1e-04
BC126175-1|AAI26176.1| 290|Homo sapiens ATPase, Na+/K+ transpor... 45 1e-04
AF007876-1|AAC39686.1| 290|Homo sapiens Na,K-ATPase beta 2 subu... 45 1e-04
U51478-1|AAC50665.1| 279|Homo sapiens sodium/potassium-transpor... 35 0.11
BC011835-1|AAH11835.1| 279|Homo sapiens ATPase, Na+/K+ transpor... 35 0.11
AY946018-1|AAX55913.1| 137|Homo sapiens Na+/K+ transporting ATP... 35 0.11
AF005896-1|AAB61713.1| 279|Homo sapiens Na K-ATPase beta-3 subu... 35 0.11
BC117227-1|AAI17228.1| 357|Homo sapiens ATP1B4 protein protein. 32 0.77
AF158384-1|AAD49693.1| 353|Homo sapiens X,K-ATPase beta-m subun... 32 0.77
AF158383-1|AAD49692.1| 357|Homo sapiens X,K-ATPase beta-m subun... 32 0.77
D86978-1|BAA13214.1| 2013|Homo sapiens KIAA0225 protein. 31 1.4
BC146784-1|AAI46785.1| 2012|Homo sapiens nucleoporin 205kDa prot... 31 1.4
BC073947-1|AAH73947.1| 435|Homo sapiens NUP205 protein protein. 31 1.4
BC063612-1|AAH63612.1| 617|Homo sapiens NUP205 protein protein. 31 1.4
BC044255-1|AAH44255.1| 832|Homo sapiens NUP205 protein protein. 31 1.4
AK127434-1|BAC86978.1| 292|Homo sapiens protein ( Homo sapiens ... 31 1.8
AK055262-1|BAB70893.1| 129|Homo sapiens protein ( Homo sapiens ... 31 1.8
BC015937-1|AAH15937.1| 479|Homo sapiens poly(A) binding protein... 30 4.1
AF013758-1|AAC39697.2| 479|Homo sapiens polyadenylate binding p... 30 4.1
AB065775-1|BAC05995.1| 312|Homo sapiens seven transmembrane hel... 30 4.1
>X03747-1|CAA27385.1| 303|Homo sapiens protein ( Human mRNA for
Na/K-ATPase beta subunit. ).
Length = 303
Score = 52.8 bits (121), Expect = 5e-07
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Frame = -3
Query: 425 NMVWVSCQGENPADRENIGPIQYLP---HRGFPGYYFPYTN---QEGYLSPLVAVHLQRP 264
N++ V C G+ D++ +G ++Y GFP Y+PY Q YL PL+AV
Sbjct: 207 NVLPVQCTGKRDEDKDKVGNVEYFGLGNSPGFPLQYYPYYGKLLQPKYLQPLLAVQFTNL 266
Query: 263 KTGMLINIECRAWANNIKY---ERLEAMGSVHIEM 168
I IEC+A+ NI Y +R + V IE+
Sbjct: 267 TMDTEIRIECKAYGENIGYSEKDRFQGRFDVKIEV 301
>M25160-1|AAA36352.1| 303|Homo sapiens protein ( Human Na,K-ATPase
beta subunit (ATP1B) gene, exons 3 through 6. ).
Length = 303
Score = 52.8 bits (121), Expect = 5e-07
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Frame = -3
Query: 425 NMVWVSCQGENPADRENIGPIQYLP---HRGFPGYYFPYTN---QEGYLSPLVAVHLQRP 264
N++ V C G+ D++ +G ++Y GFP Y+PY Q YL PL+AV
Sbjct: 207 NVLPVQCTGKRDEDKDKVGNVEYFGLGNSPGFPLQYYPYYGKLLQPKYLQPLLAVQFTNL 266
Query: 263 KTGMLINIECRAWANNIKY---ERLEAMGSVHIEM 168
I IEC+A+ NI Y +R + V IE+
Sbjct: 267 TMDTEIRIECKAYGENIGYSEKDRFQGRFDVKIEV 301
>CR407616-1|CAG28544.1| 303|Homo sapiens ATP1B1 protein.
Length = 303
Score = 52.8 bits (121), Expect = 5e-07
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Frame = -3
Query: 425 NMVWVSCQGENPADRENIGPIQYLP---HRGFPGYYFPYTN---QEGYLSPLVAVHLQRP 264
N++ V C G+ D++ +G ++Y GFP Y+PY Q YL PL+AV
Sbjct: 207 NVLPVQCTGKRDEDKDKVGNVEYFGLGNSPGFPLQYYPYYGKLLQPKYLQPLLAVQFTNL 266
Query: 263 KTGMLINIECRAWANNIKY---ERLEAMGSVHIEM 168
I IEC+A+ NI Y +R + V IE+
Sbjct: 267 TMDTEIRIECKAYGENIGYSEKDRFQGRFDVKIEV 301
>BT009787-1|AAP88789.1| 303|Homo sapiens ATPase, Na+/K+
transporting, beta 1 polypeptide protein.
Length = 303
Score = 52.8 bits (121), Expect = 5e-07
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Frame = -3
Query: 425 NMVWVSCQGENPADRENIGPIQYLP---HRGFPGYYFPYTN---QEGYLSPLVAVHLQRP 264
N++ V C G+ D++ +G ++Y GFP Y+PY Q YL PL+AV
Sbjct: 207 NVLPVQCTGKRDEDKDKVGNVEYFGLGNSPGFPLQYYPYYGKLLQPKYLQPLLAVQFTNL 266
Query: 263 KTGMLINIECRAWANNIKY---ERLEAMGSVHIEM 168
I IEC+A+ NI Y +R + V IE+
Sbjct: 267 TMDTEIRIECKAYGENIGYSEKDRFQGRFDVKIEV 301
>BC000006-1|AAH00006.1| 303|Homo sapiens ATPase, Na+/K+
transporting, beta 1 polypeptide protein.
Length = 303
Score = 52.8 bits (121), Expect = 5e-07
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Frame = -3
Query: 425 NMVWVSCQGENPADRENIGPIQYLP---HRGFPGYYFPYTN---QEGYLSPLVAVHLQRP 264
N++ V C G+ D++ +G ++Y GFP Y+PY Q YL PL+AV
Sbjct: 207 NVLPVQCTGKRDEDKDKVGNVEYFGLGNSPGFPLQYYPYYGKLLQPKYLQPLLAVQFTNL 266
Query: 263 KTGMLINIECRAWANNIKY---ERLEAMGSVHIEM 168
I IEC+A+ NI Y +R + V IE+
Sbjct: 267 TMDTEIRIECKAYGENIGYSEKDRFQGRFDVKIEV 301
>AY946016-1|AAX55911.1| 119|Homo sapiens Na+/K+ transporting ATPase
beta 1 polypeptide protein.
Length = 119
Score = 52.8 bits (121), Expect = 5e-07
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Frame = -3
Query: 425 NMVWVSCQGENPADRENIGPIQYLP---HRGFPGYYFPYTN---QEGYLSPLVAVHLQRP 264
N++ V C G+ D++ +G ++Y GFP Y+PY Q YL PL+AV
Sbjct: 23 NVLPVQCTGKRDEDKDKVGNVEYFGLGNSPGFPLQYYPYYGKLLQPKYLQPLLAVQFTNL 82
Query: 263 KTGMLINIECRAWANNIKY---ERLEAMGSVHIEM 168
I IEC+A+ NI Y +R + V IE+
Sbjct: 83 TMDTEIRIECKAYGENIGYSEKDRFQGRFDVKIEV 117
>AY545986-1|AAT11781.1| 303|Homo sapiens Na,K-ATPase beta 1 subunit
protein.
Length = 303
Score = 52.8 bits (121), Expect = 5e-07
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Frame = -3
Query: 425 NMVWVSCQGENPADRENIGPIQYLP---HRGFPGYYFPYTN---QEGYLSPLVAVHLQRP 264
N++ V C G+ D++ +G ++Y GFP Y+PY Q YL PL+AV
Sbjct: 207 NVLPVQCTGKRDEDKDKVGNVEYFGLGNSPGFPLQYYPYYGKLLQPKYLQPLLAVQFTNL 266
Query: 263 KTGMLINIECRAWANNIKY---ERLEAMGSVHIEM 168
I IEC+A+ NI Y +R + V IE+
Sbjct: 267 TMDTEIRIECKAYGENIGYSEKDRFQGRFDVKIEV 301
>AL031726-2|CAI18888.1| 303|Homo sapiens ATPase, Na+/K+
transporting, beta 1 polypeptide protein.
Length = 303
Score = 52.8 bits (121), Expect = 5e-07
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Frame = -3
Query: 425 NMVWVSCQGENPADRENIGPIQYLP---HRGFPGYYFPYTN---QEGYLSPLVAVHLQRP 264
N++ V C G+ D++ +G ++Y GFP Y+PY Q YL PL+AV
Sbjct: 207 NVLPVQCTGKRDEDKDKVGNVEYFGLGNSPGFPLQYYPYYGKLLQPKYLQPLLAVQFTNL 266
Query: 263 KTGMLINIECRAWANNIKY---ERLEAMGSVHIEM 168
I IEC+A+ NI Y +R + V IE+
Sbjct: 267 TMDTEIRIECKAYGENIGYSEKDRFQGRFDVKIEV 301
>U16799-1|AAC50132.1| 301|Homo sapiens Na,K-ATPase beta subunit
protein.
Length = 301
Score = 51.6 bits (118), Expect = 1e-06
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Frame = -3
Query: 425 NMVWVSCQGENPADRENIGPIQYLP---HRGFPGYYFPYTN---QEGYLSPLVAVHLQRP 264
N++ V C G+ D++ +G ++Y GFP Y+PY Q YL PL+AV
Sbjct: 207 NVLPVQCTGKRDEDKDKVGNVEYFGLGNSPGFPLQYYPYYGKLLQPKYLQPLLAVQFTNL 266
Query: 263 KTGMLINIECRAWANNIKY 207
I IEC+A+ NI Y
Sbjct: 267 TMDTEIRIECKAYGENIGY 285
>U45945-1|AAC50873.1| 290|Homo sapiens Na,K-ATPase beta 2 subunit
protein.
Length = 290
Score = 46.4 bits (105), Expect = 4e-05
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = -3
Query: 413 VSCQGENPADRENIGPIQYLPHRG-FPGYYFPYTNQE---GYLSPLVAVHLQRPKTGMLI 246
V+C G+ D EN+G P G YFPY ++ Y PLVAV L + +
Sbjct: 198 VTCAGKRDEDAENLGNFVMFPANGNIDLMYFPYYGKKFHVNYTQPLVAVKLLNVTPNVEV 257
Query: 245 NIECRAWANNI 213
N+ECR A NI
Sbjct: 258 NVECRINAANI 268
>M81181-1|AAA51805.1| 290|Homo sapiens Na/K-ATPase beta 2 subunit
protein.
Length = 290
Score = 44.8 bits (101), Expect = 1e-04
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = -3
Query: 413 VSCQGENPADRENIGPIQYLPHRG-FPGYYFPYTNQE---GYLSPLVAVHLQRPKTGMLI 246
V+C G+ D EN+G P G YFPY ++ Y PLVAV + +
Sbjct: 198 VTCAGKRDEDAENLGNFVMFPANGNIDLMYFPYYGKKFHVNYTQPLVAVKFLNVTPNVEV 257
Query: 245 NIECRAWANNI 213
N+ECR A NI
Sbjct: 258 NVECRINAANI 268
>BC126175-1|AAI26176.1| 290|Homo sapiens ATPase, Na+/K+
transporting, beta 2 polypeptide protein.
Length = 290
Score = 44.8 bits (101), Expect = 1e-04
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = -3
Query: 413 VSCQGENPADRENIGPIQYLPHRG-FPGYYFPYTNQE---GYLSPLVAVHLQRPKTGMLI 246
V+C G+ D EN+G P G YFPY ++ Y PLVAV + +
Sbjct: 198 VTCAGKRDEDAENLGNFVMFPANGNIDLMYFPYYGKKFHVNYTQPLVAVKFLNVTPNVEV 257
Query: 245 NIECRAWANNI 213
N+ECR A NI
Sbjct: 258 NVECRINAANI 268
>AF007876-1|AAC39686.1| 290|Homo sapiens Na,K-ATPase beta 2 subunit
protein.
Length = 290
Score = 44.8 bits (101), Expect = 1e-04
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = -3
Query: 413 VSCQGENPADRENIGPIQYLPHRG-FPGYYFPYTNQE---GYLSPLVAVHLQRPKTGMLI 246
V+C G+ D EN+G P G YFPY ++ Y PLVAV + +
Sbjct: 198 VTCAGKRDEDAENLGNFVMFPANGNIDLMYFPYYGKKFHVNYTQPLVAVKFLNVTPNVEV 257
Query: 245 NIECRAWANNI 213
N+ECR A NI
Sbjct: 258 NVECRINAANI 268
>U51478-1|AAC50665.1| 279|Homo sapiens
sodium/potassium-transporting ATPase beta-3 subunit
protein.
Length = 279
Score = 35.1 bits (77), Expect = 0.11
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = -3
Query: 380 ENIGPIQYLPHRGFPGY-YFPYTNQE---GYLSPLVAVHLQ-RP-KTGMLINIECR 231
E+I + PH G YFPY ++ GYL PLVAV + P TG + +EC+
Sbjct: 196 EDIPNVAVYPHNGMIDLKYFPYYGKKLHVGYLQPLVAVQVSFAPNNTGKEVTVECK 251
>BC011835-1|AAH11835.1| 279|Homo sapiens ATPase, Na+/K+
transporting, beta 3 polypeptide protein.
Length = 279
Score = 35.1 bits (77), Expect = 0.11
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = -3
Query: 380 ENIGPIQYLPHRGFPGY-YFPYTNQE---GYLSPLVAVHLQ-RP-KTGMLINIECR 231
E+I + PH G YFPY ++ GYL PLVAV + P TG + +EC+
Sbjct: 196 EDIPNVAVYPHNGMIDLKYFPYYGKKLHVGYLQPLVAVQVSFAPNNTGKEVTVECK 251
>AY946018-1|AAX55913.1| 137|Homo sapiens Na+/K+ transporting ATPase
beta 3 polypeptide protein.
Length = 137
Score = 35.1 bits (77), Expect = 0.11
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = -3
Query: 380 ENIGPIQYLPHRGFPGY-YFPYTNQE---GYLSPLVAVHLQ-RP-KTGMLINIECR 231
E+I + PH G YFPY ++ GYL PLVAV + P TG + +EC+
Sbjct: 54 EDIPNVAVYPHNGMIDLKYFPYYGKKLHVGYLQPLVAVQVSFAPNNTGKEVTVECK 109
>AF005896-1|AAB61713.1| 279|Homo sapiens Na K-ATPase beta-3 subunit
protein.
Length = 279
Score = 35.1 bits (77), Expect = 0.11
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = -3
Query: 380 ENIGPIQYLPHRGFPGY-YFPYTNQE---GYLSPLVAVHLQ-RP-KTGMLINIECR 231
E+I + PH G YFPY ++ GYL PLVAV + P TG + +EC+
Sbjct: 196 EDIPNVAVYPHNGMIDLKYFPYYGKKLHVGYLQPLVAVQVSFAPNNTGKEVTVECK 251
>BC117227-1|AAI17228.1| 357|Homo sapiens ATP1B4 protein protein.
Length = 357
Score = 32.3 bits (70), Expect = 0.77
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -3
Query: 419 VWVSCQGENPADRENIGPIQYLPHRG-FPGYYFPYTNQ---EGYLSPLVAVHLQRPKTGM 252
V VSC+ + D +I I Y P F Y+PY + Y SPLVA+H
Sbjct: 265 VKVSCKVQR-GDENDIRSISYYPESASFDLRYYPYYGKLTHVNYTSPLVAMHFTDVVKNQ 323
Query: 251 LINIECR 231
+ ++C+
Sbjct: 324 AVPVQCQ 330
>AF158384-1|AAD49693.1| 353|Homo sapiens X,K-ATPase beta-m subunit
protein.
Length = 353
Score = 32.3 bits (70), Expect = 0.77
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -3
Query: 419 VWVSCQGENPADRENIGPIQYLPHRG-FPGYYFPYTNQ---EGYLSPLVAVHLQRPKTGM 252
V VSC+ + D +I I Y P F Y+PY + Y SPLVA+H
Sbjct: 261 VKVSCKVQR-GDENDIRSISYYPESASFDLRYYPYYGKLTHVNYTSPLVAMHFTDVVKNQ 319
Query: 251 LINIECR 231
+ ++C+
Sbjct: 320 AVPVQCQ 326
>AF158383-1|AAD49692.1| 357|Homo sapiens X,K-ATPase beta-m subunit
protein.
Length = 357
Score = 32.3 bits (70), Expect = 0.77
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -3
Query: 419 VWVSCQGENPADRENIGPIQYLPHRG-FPGYYFPYTNQ---EGYLSPLVAVHLQRPKTGM 252
V VSC+ + D +I I Y P F Y+PY + Y SPLVA+H
Sbjct: 265 VKVSCKVQR-GDENDIRSISYYPESASFDLRYYPYYGKLTHVNYTSPLVAMHFTDVVKNQ 323
Query: 251 LINIECR 231
+ ++C+
Sbjct: 324 AVPVQCQ 330
>D86978-1|BAA13214.1| 2013|Homo sapiens KIAA0225 protein.
Length = 2013
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = +2
Query: 236 IQC*LTCQS*VSASAQLQEGSGILLGWCRGSSIPGSLGEVGTVWDQCSRDQLGSRLGRKP 415
IQ L CQ VSA + LQE +L G +++PG L E+ ++ S +L +GR
Sbjct: 1657 IQAILRCQD-VSAGS-LQE-LALLTGIISKAALPGILSELDVDVNEGSLMELQGHIGRFQ 1713
Query: 416 KPCLG 430
+ CLG
Sbjct: 1714 RQCLG 1718
>BC146784-1|AAI46785.1| 2012|Homo sapiens nucleoporin 205kDa protein.
Length = 2012
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = +2
Query: 236 IQC*LTCQS*VSASAQLQEGSGILLGWCRGSSIPGSLGEVGTVWDQCSRDQLGSRLGRKP 415
IQ L CQ VSA + LQE +L G +++PG L E+ ++ S +L +GR
Sbjct: 1656 IQAILRCQD-VSAGS-LQE-LALLTGIISKAALPGILSELDVDVNEGSLMELQGHIGRFQ 1712
Query: 416 KPCLG 430
+ CLG
Sbjct: 1713 RQCLG 1717
>BC073947-1|AAH73947.1| 435|Homo sapiens NUP205 protein protein.
Length = 435
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = +2
Query: 236 IQC*LTCQS*VSASAQLQEGSGILLGWCRGSSIPGSLGEVGTVWDQCSRDQLGSRLGRKP 415
IQ L CQ VSA + LQE +L G +++PG L E+ ++ S +L +GR
Sbjct: 79 IQAILRCQD-VSAGS-LQE-LALLTGIISKAALPGILSELDVDVNEGSLMELQGHIGRFQ 135
Query: 416 KPCLG 430
+ CLG
Sbjct: 136 RQCLG 140
>BC063612-1|AAH63612.1| 617|Homo sapiens NUP205 protein protein.
Length = 617
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = +2
Query: 236 IQC*LTCQS*VSASAQLQEGSGILLGWCRGSSIPGSLGEVGTVWDQCSRDQLGSRLGRKP 415
IQ L CQ VSA + LQE +L G +++PG L E+ ++ S +L +GR
Sbjct: 261 IQAILRCQD-VSAGS-LQE-LALLTGIISKAALPGILSELDVDVNEGSLMELQGHIGRFQ 317
Query: 416 KPCLG 430
+ CLG
Sbjct: 318 RQCLG 322
>BC044255-1|AAH44255.1| 832|Homo sapiens NUP205 protein protein.
Length = 832
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = +2
Query: 236 IQC*LTCQS*VSASAQLQEGSGILLGWCRGSSIPGSLGEVGTVWDQCSRDQLGSRLGRKP 415
IQ L CQ VSA + LQE +L G +++PG L E+ ++ S +L +GR
Sbjct: 476 IQAILRCQD-VSAGS-LQE-LALLTGIISKAALPGILSELDVDVNEGSLMELQGHIGRFQ 532
Query: 416 KPCLG 430
+ CLG
Sbjct: 533 RQCLG 537
>AK127434-1|BAC86978.1| 292|Homo sapiens protein ( Homo sapiens
cDNA FLJ45526 fis, clone BRTHA2027227. ).
Length = 292
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 417 LGFLPRREPS*SREHWSHTVPTSPRL 340
L FLPRR P+ R W+ P PR+
Sbjct: 231 LHFLPRRHPAAVRHRWTRACPEGPRM 256
>AK055262-1|BAB70893.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ30700 fis, clone FCBBF2000940. ).
Length = 129
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 100 FIYTSIYFFIFCVSAVCTLYSINI-SMCTEPMASSLSYLMLFAQA 231
F +SIY F+F +S +C +SI + S EP+ SL Y +LF +A
Sbjct: 61 FPVSSIYDFLFLISFLC--WSITMRSTFFEPLYESLVYRVLFPKA 103
>BC015937-1|AAH15937.1| 479|Homo sapiens poly(A) binding protein
interacting protein 1 protein.
Length = 479
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -2
Query: 357 PTSPRLPGILLP--LHQPRRIPEPSCSC 280
P P+ PG L P L QPR P P C
Sbjct: 45 PPQPKAPGFLQPPPLRQPRTTPPPGAQC 72
>AF013758-1|AAC39697.2| 479|Homo sapiens polyadenylate binding
protein-interacting protein-1 protein.
Length = 479
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -2
Query: 357 PTSPRLPGILLP--LHQPRRIPEPSCSC 280
P P+ PG L P L QPR P P C
Sbjct: 45 PPQPKAPGFLQPPPLRQPRTTPPPGAQC 72
>AB065775-1|BAC05995.1| 312|Homo sapiens seven transmembrane helix
receptor protein.
Length = 312
Score = 29.9 bits (64), Expect = 4.1
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 19 SEN*LRFTIQSHSNNK*VNTINFIL*LFIYTSIYF--FIFCVSAVCTLYSINISMCTEPM 192
S N F + S NK + + F+L LF Y +I+ + +S CT + +PM
Sbjct: 4 SNNSTLFILLGFSQNKNIEVLCFVLFLFCYIAIWMGNLLIMISITCT------QLIHQPM 57
Query: 193 ASSLSYLML 219
L+YL L
Sbjct: 58 YFFLNYLSL 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,093,241
Number of Sequences: 237096
Number of extensions: 1372437
Number of successful extensions: 3273
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3258
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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