Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0022
(448 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81037-5|CAB02752.1| 320|Caenorhabditis elegans Hypothetical pr... 73 7e-14
Z81550-4|CAB04477.1| 317|Caenorhabditis elegans Hypothetical pr... 71 3e-13
Z82262-6|CAB05149.1| 374|Caenorhabditis elegans Hypothetical pr... 39 0.001
AL132895-4|CAC14401.1| 333|Caenorhabditis elegans Hypothetical ... 29 1.5
Z82055-10|CAB04848.2| 659|Caenorhabditis elegans Hypothetical p... 28 2.7
AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical ... 28 3.6
AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical ... 28 3.6
AF025464-2|AAN84804.1| 496|Caenorhabditis elegans Prion-like-(q... 28 3.6
AF025464-1|AAN84805.1| 529|Caenorhabditis elegans Prion-like-(q... 28 3.6
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 27 4.7
U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer ... 27 4.7
U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer ... 27 4.7
U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer ... 27 4.7
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 27 4.7
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 27 4.7
AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein. 27 4.7
U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation fact... 27 6.2
AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation i... 27 6.2
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 27 8.2
AF036705-8|AAB95169.1| 685|Caenorhabditis elegans Hypothetical ... 27 8.2
>Z81037-5|CAB02752.1| 320|Caenorhabditis elegans Hypothetical
protein C17E4.9 protein.
Length = 320
Score = 73.3 bits (172), Expect = 7e-14
Identities = 29/85 (34%), Positives = 50/85 (58%)
Frame = -3
Query: 413 VSCQGENPADRENIGPIQYLPHRGFPGYYFPYTNQEGYLSPLVAVHLQRPKTGMLINIEC 234
++C+G D+E+IG + Y+P G G Y+PY +GY P+ V L+ +EC
Sbjct: 226 INCRGATNVDQEHIGKVTYMPSNGIDGRYYPYVFTKGYQQPIAMVKFDTIPRNKLVIVEC 285
Query: 233 RAWANNIKYERLEAMGSVHIEMLIE 159
RA+A NI+++ +G V+ E+++E
Sbjct: 286 RAYALNIEHDISSRLGMVYFEVMVE 310
>Z81550-4|CAB04477.1| 317|Caenorhabditis elegans Hypothetical
protein F55F3.3 protein.
Length = 317
Score = 71.3 bits (167), Expect = 3e-13
Identities = 27/87 (31%), Positives = 50/87 (57%)
Frame = -3
Query: 419 VWVSCQGENPADRENIGPIQYLPHRGFPGYYFPYTNQEGYLSPLVAVHLQRPKTGMLINI 240
+ ++C+G D+E++G ++Y+P G G Y+PY Y P+ V L+ +
Sbjct: 221 ITINCEGATSFDKEHLGKVKYIPETGIDGRYYPYVFVPSYQQPIAMVKFDTIPRNKLVIV 280
Query: 239 ECRAWANNIKYERLEAMGSVHIEMLIE 159
ECRA+A+NI+++ +G V+ E+ +E
Sbjct: 281 ECRAYASNIEHDISTRLGMVYFELFVE 307
>Z82262-6|CAB05149.1| 374|Caenorhabditis elegans Hypothetical
protein C43F9.6 protein.
Length = 374
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = -3
Query: 362 QYLPHRGFPGYYFPYTNQEGYLSPLVAVHLQRPKTGMLINIEC 234
+Y P G P YFPY NQ GY P V L IEC
Sbjct: 298 EYFPKTGIPTCYFPYANQGGYEQPYQMVKLTNITVNRETTIEC 340
>AL132895-4|CAC14401.1| 333|Caenorhabditis elegans Hypothetical
protein Y59A8A.4 protein.
Length = 333
Score = 29.1 bits (62), Expect = 1.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 350 HRGFPGYYFPYTNQEGYLSPLVAVHLQRPKTGMLINIECRA 228
H+GF + ++ G LS L+ ++LQ P ++ I C++
Sbjct: 270 HQGFNNVVYICSSLHGVLSTLIMIYLQNPYRAVVKRIFCQS 310
>Z82055-10|CAB04848.2| 659|Caenorhabditis elegans Hypothetical
protein T26H2.7 protein.
Length = 659
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +2
Query: 284 LQEGSGILLGWCRGSSIPGSLG--EVGTVWDQCSRDQLGSRLGRKPKPCL-GSSY 439
+ EG G LGWCR + + G L +G W G K L GS+Y
Sbjct: 411 IYEGVGTPLGWCRHTGLHGKLKIMTIGNSWTANHAKMFYQECGFLAKSILQGSAY 465
>AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical
protein Y87G2A.8b protein.
Length = 586
Score = 27.9 bits (59), Expect = 3.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 356 GTVWDQCSRDQLGSRLGRK 412
G +WD CS DQ G LG++
Sbjct: 535 GIIWDICSYDQWGVELGKQ 553
>AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical
protein Y87G2A.8a protein.
Length = 551
Score = 27.9 bits (59), Expect = 3.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 356 GTVWDQCSRDQLGSRLGRK 412
G +WD CS DQ G LG++
Sbjct: 500 GIIWDICSYDQWGVELGKQ 518
>AF025464-2|AAN84804.1| 496|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform a protein.
Length = 496
Score = 27.9 bits (59), Expect = 3.6
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -3
Query: 353 PHRGFPGYYFPYTNQEGYLSPLVAVHLQRPKTGMLINIECRAWANNIKYERLEAMGSV 180
PH+ + +PY Q+ SP P M N+ C A+ ++I +++ E MGS+
Sbjct: 294 PHQQWTPQGYPYGYQQNPNSP------PNPALMMDANLPCSAFTDDICHQQREQMGSL 345
>AF025464-1|AAN84805.1| 529|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform b protein.
Length = 529
Score = 27.9 bits (59), Expect = 3.6
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -3
Query: 353 PHRGFPGYYFPYTNQEGYLSPLVAVHLQRPKTGMLINIECRAWANNIKYERLEAMGSV 180
PH+ + +PY Q+ SP P M N+ C A+ ++I +++ E MGS+
Sbjct: 316 PHQQWTPQGYPYGYQQNPNSP------PNPALMMDANLPCSAFTDDICHQQREQMGSL 367
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 353 VGTVWDQCSRDQLGSRLGRKPKPCL 427
VG+V D C RD + G+KP C+
Sbjct: 428 VGSVSDACVRDDQSAENGQKPGDCI 452
>U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform c protein.
Length = 796
Score = 27.5 bits (58), Expect = 4.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 360 VPTSPRLPGILLPLHQPRRIPEPSCSCALAET*DWHVNQH 241
+P P++P + PLHQ + PSCS +H N H
Sbjct: 347 IPQMPQMPQMPPPLHQGYGMNGPSCSS--ENNNPFHQNHH 384
>U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform a protein.
Length = 892
Score = 27.5 bits (58), Expect = 4.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 360 VPTSPRLPGILLPLHQPRRIPEPSCSCALAET*DWHVNQH 241
+P P++P + PLHQ + PSCS +H N H
Sbjct: 443 IPQMPQMPQMPPPLHQGYGMNGPSCSS--ENNNPFHQNHH 480
>U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform b protein.
Length = 864
Score = 27.5 bits (58), Expect = 4.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 360 VPTSPRLPGILLPLHQPRRIPEPSCSCALAET*DWHVNQH 241
+P P++P + PLHQ + PSCS +H N H
Sbjct: 415 IPQMPQMPQMPPPLHQGYGMNGPSCSS--ENNNPFHQNHH 452
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 353 VGTVWDQCSRDQLGSRLGRKPKPCL 427
VG+V D C RD + G+KP C+
Sbjct: 428 VGSVSDACVRDDQSAENGQKPGDCI 452
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 353 VGTVWDQCSRDQLGSRLGRKPKPCL 427
VG+V D C RD + G+KP C+
Sbjct: 428 VGSVSDACVRDDQSAENGQKPGDCI 452
>AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein.
Length = 796
Score = 27.5 bits (58), Expect = 4.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 360 VPTSPRLPGILLPLHQPRRIPEPSCSCALAET*DWHVNQH 241
+P P++P + PLHQ + PSCS +H N H
Sbjct: 347 IPQMPQMPQMPPPLHQGYGMNGPSCSS--ENNNPFHQNHH 384
>U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 4 protein.
Length = 212
Score = 27.1 bits (57), Expect = 6.2
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -2
Query: 237 MSCLGEQHQV*ET*SHGLCTHRDVDRVESTNSRHAEDKEVYRRIYE*LEN 88
M+ +GEQ V + +C+ R+ + + S +R+A+D V RI E L +
Sbjct: 129 MAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRS 178
>AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 4 protein.
Length = 212
Score = 27.1 bits (57), Expect = 6.2
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -2
Query: 237 MSCLGEQHQV*ET*SHGLCTHRDVDRVESTNSRHAEDKEVYRRIYE*LEN 88
M+ +GEQ V + +C+ R+ + + S +R+A+D V RI E L +
Sbjct: 129 MAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRS 178
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 281 QLQEGSGILLGWCRGSSIPGSLGEVGTVWDQCSRDQLGSRLGRKP 415
+L E +G+ GWC E+ + DQC DQL + + KP
Sbjct: 2178 ELCETTGMPSGWCMQHD-----KELMEICDQCGLDQLAANVLNKP 2217
>AF036705-8|AAB95169.1| 685|Caenorhabditis elegans Hypothetical
protein F37C4.3 protein.
Length = 685
Score = 26.6 bits (56), Expect = 8.2
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Frame = +2
Query: 290 EGSGILLGWCRGSSIPGS----LGEVGTVWDQCSRDQLGSRLGRKPKPCL-GSSY 439
E G LGWCR + + S + +G W GRK K + G++Y
Sbjct: 443 ESVGTPLGWCRHTGLSKSGKYKMATIGNSWTANHAKMFYQECGRKAKSIMQGAAY 497
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,720,160
Number of Sequences: 27780
Number of extensions: 202893
Number of successful extensions: 558
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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