Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0021
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.6  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   2.6  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   2.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.6  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   6.0  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 548 NKFLNYFKKITIASNTQIVYLNVTMWQLSER 456
           NK+L   ++I IAS  Q+    V +W  + R
Sbjct: 275 NKYLTRARRIEIASALQLNETQVKIWFQNRR 305


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 548 NKFLNYFKKITIASNTQIVYLNVTMWQLSER 456
           NK+L   ++I IAS  Q+    V +W  + R
Sbjct: 64  NKYLTRARRIEIASALQLNETQVKIWFQNRR 94


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 548 NKFLNYFKKITIASNTQIVYLNVTMWQLSER 456
           NK+L   ++I IAS  Q+    V +W  + R
Sbjct: 64  NKYLTRARRIEIASALQLNETQVKIWFQNRR 94


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 261 YFIQINCFLLCIYIF 217
           YF+    FLLCIY F
Sbjct: 135 YFVVPLFFLLCIYYF 149



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 321 YFKIKYLVVKALKCGF*RSIYFIQINCFLLCIYIF 217
           YF   ++++  +   +   I F     FLLCIY F
Sbjct: 102 YFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYF 136


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 97  ASIVNLKCTNLSVHFPTP 44
           ASI +   T+L +H+P P
Sbjct: 148 ASIFHAAATSLPLHYPPP 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,978
Number of Sequences: 336
Number of extensions: 3345
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)