Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0020
         (602 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_25195| Best HMM Match : DnaJ (HMM E-Value=1.9)                      32   0.41 
SB_12717| Best HMM Match : CheR (HMM E-Value=5.6)                      29   2.9  
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.8  
SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.1  
SB_31109| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.073)            28   5.1  
SB_39986| Best HMM Match : CNH (HMM E-Value=6.99949e-42)               28   6.7  
SB_42679| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-08)                 27   8.8  
SB_20380| Best HMM Match : Lipase_GDSL (HMM E-Value=0.24)              27   8.8  

>SB_25195| Best HMM Match : DnaJ (HMM E-Value=1.9)
          Length = 78

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -2

Query: 562 ENFESLIDNLTDADSLTSSTETEVFKSVGDSDSACSDESGYSE 434
           E   ++I +LT+  +    ++ EVF  +G+S  A SD S  S+
Sbjct: 34  EKLRAIIKHLTEQRNSEDGSDDEVFNEIGESSDAFSDSSSDSD 76


>SB_12717| Best HMM Match : CheR (HMM E-Value=5.6)
          Length = 685

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -2

Query: 550 SLIDNLTDADSLTSSTETEVFKSVGDSDS 464
           S + +L D+  L  +T TEVF SVG  DS
Sbjct: 319 SEVKDLLDSGDLVMATATEVFYSVGKKDS 347


>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 641

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +2

Query: 170 SSTNCFKDS*FTKQNFIQDTLSITKT 247
           ++T CFK++  TK  FI+ T++ T+T
Sbjct: 338 TTTTCFKETSVTKTEFIRPTVTCTET 363


>SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1220

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 514 TSSTETEVFKSVGDSDSACSDESGYSE 434
           TSSTE +  +  G ++S C+DES   +
Sbjct: 444 TSSTEKKTTRDEGSTESGCNDESNLGQ 470


>SB_31109| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.073)
          Length = 582

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = +3

Query: 147 TSQLMGPCPAQTVLRTVNLPNKTSYRIHY 233
           T Q  GP P QT    VN      Y IHY
Sbjct: 42  TEQGFGPSPTQTAREVVNYQPLGHYHIHY 70


>SB_39986| Best HMM Match : CNH (HMM E-Value=6.99949e-42)
          Length = 952

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -3

Query: 513 LLAPKLKCSRVWVTATAPAVMNQATPSSWMERKALLGTLL 394
           LLAP  K  + WVTA     ++Q   +S  + K LLG +L
Sbjct: 515 LLAPSFKDKQKWVTA-LELTLDQIKKTSDKDGKKLLGNIL 553


>SB_42679| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-08)
          Length = 537

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -1

Query: 401 HYYGLNHVSRFHENRCRL*VHSYMLVSSINIKLYLCDLELTY*DHLSVVNTV 246
           H Y      +F + +C      +ML  +I++    C L LTY  + SVVN+V
Sbjct: 271 HIYDYAGTRKFADTKCDYIGPLWMLGQAISVS---CSLVLTYERYRSVVNSV 319


>SB_20380| Best HMM Match : Lipase_GDSL (HMM E-Value=0.24)
          Length = 416

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 332 CNCELIICTDFHEIATHDLNHNSVPNN 412
           CNCE   CTDF E+ + +L ++ VP N
Sbjct: 136 CNCEA--CTDFSEVISAEL-YDWVPQN 159


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,493,070
Number of Sequences: 59808
Number of extensions: 310762
Number of successful extensions: 876
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)