Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0018
         (358 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   2.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   2.2  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   2.9  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   2.9  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   3.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    20   6.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   6.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    20   6.6  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    20   8.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   8.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   8.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    20   8.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 259 VRSLDPEQTDQRHTLLLHAPPPGHVREQSQQSTRDGLQ 146
           VRS++ +      TL++H P  GH  + S    RDG Q
Sbjct: 514 VRSMEKQAIVAGGTLIVHCPFAGHPVD-SVVWERDGRQ 550



 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 32  GSLFNNT*RFVAKYI 76
           GSL+N+T  + +KY+
Sbjct: 164 GSLYNHTANYDSKYL 178



 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 335  DRATCSALTA 306
            D+ATC+ LTA
Sbjct: 1105 DKATCTTLTA 1114


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 350 WACCTDRATCSALTA 306
           W C TD  TC+ +++
Sbjct: 32  WQCNTDEETCTRISS 46


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 232 LSVQGQGYGRDQQAVSGAGQT 294
           L V  Q Y RD   ++G G+T
Sbjct: 415 LFVNNQPYSRDSYNLAGMGET 435


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 128 KMKSNFKRSRSNNDHRNL 75
           KMK     S +  DHRNL
Sbjct: 9   KMKDPMSASETVQDHRNL 26


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 128 KMKSNFKRSRSNNDHRNL 75
           KMK     S +  DHRNL
Sbjct: 9   KMKDPMSASETVQDHRNL 26


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 10/12 (83%), Positives = 10/12 (83%), Gaps = 1/12 (8%)
 Frame = +3

Query: 132 VRPAACNP-SRV 164
           VRPAAC P SRV
Sbjct: 139 VRPAACTPDSRV 150


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 202 GHVITACVFDLSVQGQGYGRDQQAVSGAGQTGAPNAVR 315
           G++I+  + D    G GYG + +        G  NAV+
Sbjct: 360 GNLISPSINDDGTCGNGYGCEHRWRQIFNMVGFRNAVQ 397


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -3

Query: 200 TAWTCT*TVSAKYSRWITSRRSY-TKMKSN 114
           T W CT     K+S ++T    +  K++S+
Sbjct: 734 TVWICTLMNRCKFSEFMTKLLEFDVKLQSD 763


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = -2

Query: 69  FATNLYVLLNKLPFCF 22
           + + L + + ++PFCF
Sbjct: 177 YVSYLLIFVQQIPFCF 192


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +2

Query: 71  YIDFGGHCWN 100
           Y+DFG   WN
Sbjct: 277 YVDFGSVGWN 286


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = +1

Query: 121  FIFVYDLRLVIHLEYFAETVH 183
            F+F+    L++ +++FA  +H
Sbjct: 1285 FVFLIFFALLMVIQFFAMMIH 1305


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = +1

Query: 121  FIFVYDLRLVIHLEYFAETVH 183
            F+F+    L++ +++FA  +H
Sbjct: 1285 FVFLIFFALLMVIQFFAMMIH 1305


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 130 VYDLRLVIHLEYFAETVHVHVQAVGHVIT 216
           V+D      +EYF   +H   Q + ++IT
Sbjct: 143 VFDFLCRHTVEYFQNYIHFFYQLLLYLIT 171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,371
Number of Sequences: 336
Number of extensions: 1632
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)