Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0018
         (358 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...    64   3e-11
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p...    29   0.72 
Z83236-6|CAB05783.1|  132|Caenorhabditis elegans Hypothetical pr...    28   2.2  
Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p...    28   2.2  
Z82268-10|CAB05202.1|  972|Caenorhabditis elegans Hypothetical p...    28   2.2  
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ...    28   2.2  
AL021476-1|CAA16317.1|  972|Caenorhabditis elegans Hypothetical ...    28   2.2  
U88173-9|AAK21384.3|  320|Caenorhabditis elegans Hypothetical pr...    27   5.1  
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p...    26   6.7  
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr...    26   6.7  
Z67755-5|CAA91758.2|  966|Caenorhabditis elegans Hypothetical pr...    26   6.7  
U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical pr...    26   6.7  
DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.      26   6.7  
AF200199-1|AAF13716.1|  966|Caenorhabditis elegans MES-1 protein.      26   6.7  
AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical ...    26   6.7  
Z81595-8|CAB54305.1|  345|Caenorhabditis elegans Hypothetical pr...    26   8.9  
Z81595-7|CAB54304.1|  358|Caenorhabditis elegans Hypothetical pr...    26   8.9  
Z69663-2|CAA93509.2|  819|Caenorhabditis elegans Hypothetical pr...    26   8.9  
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu...    26   8.9  
AF022980-1|AAG24194.1|  346|Caenorhabditis elegans Serpentine re...    26   8.9  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score = 64.1 bits (149), Expect = 3e-11
 Identities = 30/63 (47%), Positives = 40/63 (63%)
 Frame = -2

Query: 315 PDGVRCPGLSRTRDGLLIASVALTLNRQIKDTRCYYMPHRLDMYVNSLSKVLEMDYKPQV 136
           PDG R P LSR R+G+LIA + L L RQ KD   + M +RLDMY   +++V   DY+P +
Sbjct: 324 PDGSRTPALSRVREGVLIAELDLNLCRQCKDAWGFRMTNRLDMYAQKITEVSNPDYRPDI 383

Query: 135 VHE 127
             E
Sbjct: 384 RRE 386


>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
            protein F48E3.8a protein.
          Length = 2427

 Score = 29.5 bits (63), Expect = 0.72
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 147  CNPSRVLC*DCSRTCPGGGACNNSVC 224
            C+PS      C + C GG +C+NS+C
Sbjct: 1845 CDPSCAYQ-PCMQRCSGGSSCSNSIC 1869


>Z83236-6|CAB05783.1|  132|Caenorhabditis elegans Hypothetical
           protein K10H10.7 protein.
          Length = 132

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -1

Query: 259 VRSLDPEQTDQRHTLLLHAPP-PGHV 185
           V+S D E+  + H L L APP P HV
Sbjct: 13  VKSEDQEEVQEEHVLRLRAPPSPPHV 38


>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1c protein.
          Length = 1210

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 99  TGSLKIAFHFRVRPAACNPSRVLC*DCSRTCPGG 200
           TGS  +AF     PA  N S  +  DC+  CP G
Sbjct: 502 TGSTVVAFSNGTEPAVFNNSYFVPPDCTPDCPFG 535


>Z82268-10|CAB05202.1|  972|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1a protein.
          Length = 972

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 99  TGSLKIAFHFRVRPAACNPSRVLC*DCSRTCPGG 200
           TGS  +AF     PA  N S  +  DC+  CP G
Sbjct: 502 TGSTVVAFSNGTEPAVFNNSYFVPPDCTPDCPFG 535


>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1c protein.
          Length = 1210

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 99  TGSLKIAFHFRVRPAACNPSRVLC*DCSRTCPGG 200
           TGS  +AF     PA  N S  +  DC+  CP G
Sbjct: 502 TGSTVVAFSNGTEPAVFNNSYFVPPDCTPDCPFG 535


>AL021476-1|CAA16317.1|  972|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1a protein.
          Length = 972

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 99  TGSLKIAFHFRVRPAACNPSRVLC*DCSRTCPGG 200
           TGS  +AF     PA  N S  +  DC+  CP G
Sbjct: 502 TGSTVVAFSNGTEPAVFNNSYFVPPDCTPDCPFG 535


>U88173-9|AAK21384.3|  320|Caenorhabditis elegans Hypothetical
           protein F46F11.7 protein.
          Length = 320

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 186 TCPGGGACNNSVCL*SVC 239
           TC GG  C NSVC+ + C
Sbjct: 209 TCHGGTVCVNSVCVMNPC 226


>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
           protein F36A2.13 protein.
          Length = 2944

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 170 AKYSRWITSRRSYTKMKSNFKRSRS 96
           AKY R + S R+Y +++ N   SRS
Sbjct: 151 AKYRRVMLSNRAYYRLRGNLGESRS 175


>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical
           protein F36A2.13 protein.
          Length = 2944

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 170 AKYSRWITSRRSYTKMKSNFKRSRS 96
           AKY R + S R+Y +++ N   SRS
Sbjct: 151 AKYRRVMLSNRAYYRLRGNLGESRS 175


>Z67755-5|CAA91758.2|  966|Caenorhabditis elegans Hypothetical
           protein F54F7.5 protein.
          Length = 966

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -2

Query: 219 RCYYMPHRLDMYVNSL--SKVLEMDYKPQVVHE 127
           R +Y+ H L+++VN+L   K+  M   P   H+
Sbjct: 278 RNFYLDHTLEVFVNNLDFDKIYTMQLAPSGTHD 310


>U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical
           protein T10E10.4 protein.
          Length = 966

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 168 C*DCSRTCPGGGACNNSVC 224
           C   S +CPG   C N VC
Sbjct: 249 CSQVSSSCPGTSQCQNKVC 267


>DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.
          Length = 690

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = -2

Query: 303 RCPGLSRTRDGLLIASVALTLNRQ--IKDTRCYYMPHRLDMYVNSLSKVLEMD 151
           R   +   R G+ +AS+   +     + DT CY    R D+  +  S V +MD
Sbjct: 459 RIASMKTARRGIAVASIENVIYAVGGLDDTTCYKTVERYDIEEDEWSTVADMD 511


>AF200199-1|AAF13716.1|  966|Caenorhabditis elegans MES-1 protein.
          Length = 966

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -2

Query: 219 RCYYMPHRLDMYVNSL--SKVLEMDYKPQVVHE 127
           R +Y+ H L+++VN+L   K+  M   P   H+
Sbjct: 278 RNFYLDHTLEVFVNNLDFDKIYTMQLAPSGTHD 310


>AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical
           protein W02G9.2 protein.
          Length = 690

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = -2

Query: 303 RCPGLSRTRDGLLIASVALTLNRQ--IKDTRCYYMPHRLDMYVNSLSKVLEMD 151
           R   +   R G+ +AS+   +     + DT CY    R D+  +  S V +MD
Sbjct: 459 RIASMKTARRGIAVASIENVIYAVGGLDDTTCYKTVERYDIEEDEWSTVADMD 511


>Z81595-8|CAB54305.1|  345|Caenorhabditis elegans Hypothetical
           protein T22H2.6b protein.
          Length = 345

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +3

Query: 153 PSRVLC*DCSRTCPGGGACNNSVC 224
           P+ V C D    CP G  C+   C
Sbjct: 206 PNAVCCADMLHCCPNGFTCHGQFC 229


>Z81595-7|CAB54304.1|  358|Caenorhabditis elegans Hypothetical
           protein T22H2.6a protein.
          Length = 358

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +3

Query: 153 PSRVLC*DCSRTCPGGGACNNSVC 224
           P+ V C D    CP G  C+   C
Sbjct: 206 PNAVCCADMLHCCPNGFTCHGQFC 229


>Z69663-2|CAA93509.2|  819|Caenorhabditis elegans Hypothetical
           protein K02B9.2 protein.
          Length = 819

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 12/18 (66%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -1

Query: 202 PPPG-HVREQSQQSTRDG 152
           PPPG H REQSQ+  R G
Sbjct: 14  PPPGDHRREQSQERARVG 31


>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
            (myotubularin) family protein 5 protein.
          Length = 1744

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 173  SAKYSRWITSRRSYTKMKSNFKRSRSNNDHR 81
            S K+    ++ R +TK K++ +R RS++ HR
Sbjct: 947  SHKFGTLNSAIRGFTKKKTDTRRIRSHSSHR 977


>AF022980-1|AAG24194.1|  346|Caenorhabditis elegans Serpentine
           receptor, class h protein36 protein.
          Length = 346

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 176 VSAKYSRWITSRRSYTKMKSNFKRSRSNND 87
           +SAK + W+ S+R  TK  +  K  +  ND
Sbjct: 217 ISAKIAFWVLSKRMETKSDATKKMHKKFND 246


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,572,485
Number of Sequences: 27780
Number of extensions: 148245
Number of successful extensions: 547
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)