Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0013
         (744 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0191 + 1478267-1478929,1480579-1480789,1482625-1482925,148...    29   2.9  
01_05_0659 - 24061318-24061575,24061664-24061918,24062001-240621...    29   3.9  
04_03_0811 - 19909128-19912214                                         29   5.2  
07_01_1179 + 11184521-11184536,11184593-11184691,11184790-111848...    28   6.8  
02_05_0424 + 28841562-28841569,28841636-28841714,28841826-288418...    28   6.8  
01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,403...    28   9.0  

>06_01_0191 +
           1478267-1478929,1480579-1480789,1482625-1482925,
           1483217-1483612,1483993-1484070,1484166-1484373
          Length = 618

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 592 MLHCNECIIIWSKYYRYY 539
           M HC+ C+I WSKY   Y
Sbjct: 278 MAHCSRCLIPWSKYNGLY 295


>01_05_0659 - 24061318-24061575,24061664-24061918,24062001-24062172,
            24062258-24062381,24062442-24062485,24063601-24063734,
            24063822-24063905,24064100-24064390,24064713-24065045,
            24065145-24065389,24065644-24065910,24065997-24066157,
            24066253-24066569,24066665-24066946,24067024-24067325,
            24067398-24067488,24067796-24067849,24067963-24068039,
            24068159-24068318,24068653-24068737,24069029-24069238,
            24069344-24069732
          Length = 1444

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -3

Query: 460  WIACNFYWSLFYLYQRFVFNT--GLFATQIT 374
            W A  F+W LF+++  F++ T  G+ A  +T
Sbjct: 1301 WTAAKFFWYLFFMFFTFLYFTFYGMMAVGLT 1331


>04_03_0811 - 19909128-19912214
          Length = 1028

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +1

Query: 478 FNKIILKLFPRYKIKSLCQWDNIGNILTI*LYIHYNVTFDFIIIIHKFLNI*KCDYYSKM 657
           FN  +L L     +KSLC + N GN L+     H N    ++ +    +NI  CD +  M
Sbjct: 371 FNLRLLSLRGCTNLKSLCNFSNRGNTLSPNDKCHVN-NLLYLDLTQLNINIFPCDLFQDM 429


>07_01_1179 +
           11184521-11184536,11184593-11184691,11184790-11184852,
           11185011-11185084,11185187-11185261,11185371-11185514,
           11185629-11185733,11185839-11186276,11187102-11188241,
           11188320-11188493
          Length = 775

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 136 KIFASFA*QIRKTY*LKKVEIINIRSYLLYRRDN 237
           KIF  F  Q+RKT+ L+  EI   + Y ++  +N
Sbjct: 448 KIFKRFQAQLRKTFELQVEEIEKFKCYAVFEAEN 481


>02_05_0424 +
           28841562-28841569,28841636-28841714,28841826-28841894,
           28841965-28842054,28842132-28842270,28842523-28842625,
           28842708-28842760,28842849-28842915,28843087-28843195,
           28843588-28843653,28843740-28843808,28843893-28843959,
           28844038-28844154,28844433-28844656,28845083-28845094
          Length = 423

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +1

Query: 28  RKNSILFFRLTYILCFFWGL--DTTIIFKQTILRNFFLKIFASFA*QIRKTY 177
           R+N IL+F + Y+ C  + L  D    F +  +RN+  +IF + A   ++ Y
Sbjct: 70  RENDILYFIMEYMECNLYQLMKDRVKPFSEAEVRNWCFQIFQALAYMHQRGY 121


>01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,
            4034616-4034839,4035168-4035332,4035591-4035881,
            4035971-4036303,4036391-4036485,4036570-4036689,
            4036778-4036934,4037176-4037279,4037383-4037543,
            4037636-4037952,4038655-4038936,4039020-4039321,
            4039453-4039543,4040227-4040280,4040367-4040684,
            4041008-4041092,4041178-4041266,4041474-4041594,
            4042136-4042431
          Length = 1434

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = -3

Query: 460  WIACNFYWSLFYLYQRFVFNT--GLFATQIT 374
            W A  F W LF++Y   ++ T  G+  T IT
Sbjct: 1286 WTAVKFLWYLFFMYFTLLYFTFYGMMTTAIT 1316


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,211,262
Number of Sequences: 37544
Number of extensions: 295686
Number of successful extensions: 487
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)