BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0012 (616 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces pomb... 29 0.40 SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharo... 29 0.71 SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 27 1.6 SPAC4A8.03c |ptc4||protein phosphatase 2C Ptc4|Schizosaccharomyc... 26 3.8 SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr... 25 6.6 SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing] |Schizos... 25 6.6 SPBPB21E7.04c ||SPAPB21E7.04c, SPAPB21E7.04c|S-adenosylmethionin... 25 8.7 >SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces pombe|chr 2|||Manual Length = 1136 Score = 29.5 bits (63), Expect = 0.40 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Frame = +2 Query: 179 YKRIL*NDG--FIQFLFYISHFYYYNLRFSL-PSNHVSHFNYIDFIFFESD 322 YKR+L N+ F + + Y+ HF L + PSN V++ NY + + F D Sbjct: 494 YKRLLYNEWERFAKLVAYLDHFGDEILSINFDPSNAVTYINYANKVAFIRD 544 >SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharomyces pombe|chr 3|||Manual Length = 229 Score = 28.7 bits (61), Expect = 0.71 Identities = 10/34 (29%), Positives = 20/34 (58%) Frame = +2 Query: 218 LFYISHFYYYNLRFSLPSNHVSHFNYIDFIFFES 319 L Y++ Y + SLP +H ++ I ++FF++ Sbjct: 75 LIYLADKYDTERKISLPRDHPEYYKVIQYLFFQA 108 >SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1023 Score = 27.5 bits (58), Expect = 1.6 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -3 Query: 497 KDIIKNSNEKPYEYLIEAPIRLPSPANTGVSLQCSLYHFHDQYLS 363 +DII NS +KP + LP + + SL S + FH +LS Sbjct: 17 QDIISNSYQKPLSLVDSTDRALPDSSLS--SLSRSTFQFHKHHLS 59 >SPAC4A8.03c |ptc4||protein phosphatase 2C Ptc4|Schizosaccharomyces pombe|chr 1|||Manual Length = 383 Score = 26.2 bits (55), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +1 Query: 88 VRFKKEKKTVVFINCHFFAFCVNNYRFRYFIQTY 189 +RF K + ++I A+C NY +R FIQ Y Sbjct: 3 IRFLKRLRAPLYIQN---AYCSKNYFYRSFIQYY 33 >SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 703 Score = 25.4 bits (53), Expect = 6.6 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +1 Query: 403 NETPVFAGLGRRIGASIRYS*GFSFEFFIMSFLV 504 N T F+G+ R+ S+ FSF FF++ L+ Sbjct: 545 NSTVSFSGIFDRVEKSVISELNFSFLFFLLWLLI 578 >SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing] |Schizosaccharomyces pombe|chr 1|||Manual Length = 539 Score = 25.4 bits (53), Expect = 6.6 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -3 Query: 125 IKTTVFFSFLNLTPYNY*YWMN 60 IKT VF SF N P + WM+ Sbjct: 129 IKTEVFKSFFNSMPKEFEVWMS 150 >SPBPB21E7.04c ||SPAPB21E7.04c, SPAPB21E7.04c|S-adenosylmethionine-dependent methyltransferase |Schizosaccharomyces pombe|chr 2|||Manual Length = 281 Score = 25.0 bits (52), Expect = 8.7 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = +2 Query: 251 LRFSLPSNHVSHFNYIDFIFFE 316 LR SLP N + F Y+DF+F + Sbjct: 163 LRRSLP-NVIPSFEYLDFVFID 183 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,208,780 Number of Sequences: 5004 Number of extensions: 40506 Number of successful extensions: 113 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 113 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 269634532 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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