Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0011
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132898-11|CAB60945.4| 552|Caenorhabditis elegans Hypothetical... 151 4e-37
Z93385-9|CAB07642.1| 843|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z81083-7|CAB03105.1| 843|Caenorhabditis elegans Hypothetical pr... 36 0.019
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 34 0.078
AC006830-7|AAK68613.2| 479|Caenorhabditis elegans Hypothetical ... 30 1.7
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 29 3.9
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 29 3.9
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 28 5.1
AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical ... 28 5.1
AF003135-5|AAK18990.1| 678|Caenorhabditis elegans Hypothetical ... 28 5.1
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 28 5.1
AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix metall... 28 5.1
U80953-5|AAO61446.3| 317|Caenorhabditis elegans Dachsund transc... 28 6.8
U80953-4|AAB52555.2| 420|Caenorhabditis elegans Dachsund transc... 28 6.8
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 27 8.9
>AL132898-11|CAB60945.4| 552|Caenorhabditis elegans Hypothetical
protein Y59A8B.22 protein.
Length = 552
Score = 151 bits (366), Expect = 4e-37
Identities = 72/161 (44%), Positives = 110/161 (68%), Gaps = 1/161 (0%)
Frame = +1
Query: 19 KLSSCITQLATRE-QPPMERFLTKASETFDKCRKIEGRMASDQDLKLADTLRYYMRDAHA 195
K+ ++A E + R + ++ K +K+E R ++D++LKL DTL Y+ RD A
Sbjct: 392 KIGDSFERIARGEPNKSLARTFAQGADAMFKLKKVESRSSNDEELKLGDTLHYFARDTQA 451
Query: 196 AKAVLVRRLRCLAAYEAANRNLEKARAKNKDVHAAEQGQAEACAKFEQLSARAREELIDF 375
AK +L RR+RCLA YEAAN+NLE+ARAKN+++ AE Q+EAC KFE+++ ++ EL +
Sbjct: 452 AKDLLYRRMRCLANYEAANKNLERARAKNREIPKAEAEQSEACKKFEEITGLSKNELKEL 511
Query: 376 RTRRVAAFRKSLIELAELEIKHARSQQELFRKSLQVLXECQ 498
+TRRV AF+K+L +LAELEIKH++++ L R ++ L Q
Sbjct: 512 KTRRVQAFKKNLTDLAELEIKHSKAEISLLRDVVERLKSSQ 552
>Z93385-9|CAB07642.1| 843|Caenorhabditis elegans Hypothetical
protein F44F1.7 protein.
Length = 843
Score = 36.3 bits (80), Expect = 0.019
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Frame = +1
Query: 4 ADAHIKLSSCITQLATREQPPMERFLTKASETFDKCRKIEGRMASDQDLKLADTLRYYMR 183
+++ ++L S ++QL RE+ M + L KA + + R + S L++ +T ++
Sbjct: 3 SNSALELKSALSQL-NRERSEMVKDLEKAQKDYVAARNMHKSTGSQNHLEVVNTCWKNVQ 61
Query: 184 DAHAAKAVLVRRLRCL--AAYEAANRNLEKARAKNKDVHAAEQGQAEACAKFEQLSARAR 357
A A V + + +A + E KN++ + + + AK L A R
Sbjct: 62 AAQKAHQSKVEEFHMVRRSFADAVRESPESCSIKNRESNPSSTNDQDLAAKKAVLDAEFR 121
Query: 358 EELI 369
EE I
Sbjct: 122 EEAI 125
>Z81083-7|CAB03105.1| 843|Caenorhabditis elegans Hypothetical
protein F44F1.7 protein.
Length = 843
Score = 36.3 bits (80), Expect = 0.019
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Frame = +1
Query: 4 ADAHIKLSSCITQLATREQPPMERFLTKASETFDKCRKIEGRMASDQDLKLADTLRYYMR 183
+++ ++L S ++QL RE+ M + L KA + + R + S L++ +T ++
Sbjct: 3 SNSALELKSALSQL-NRERSEMVKDLEKAQKDYVAARNMHKSTGSQNHLEVVNTCWKNVQ 61
Query: 184 DAHAAKAVLVRRLRCL--AAYEAANRNLEKARAKNKDVHAAEQGQAEACAKFEQLSARAR 357
A A V + + +A + E KN++ + + + AK L A R
Sbjct: 62 AAQKAHQSKVEEFHMVRRSFADAVRESPESCSIKNRESNPSSTNDQDLAAKKAVLDAEFR 121
Query: 358 EELI 369
EE I
Sbjct: 122 EEAI 125
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 34.3 bits (75), Expect = 0.078
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Frame = +1
Query: 283 KDVHAAEQGQAEACAKFEQLSARAREELIDFRTRRVAAFRKSL--IELAELEIKHARS-- 450
K++HAA QG EA K E+ + EEL R V +K L E+A+ I ++
Sbjct: 1363 KEIHAARQGAGEARRKAEESVNQQLEELRKKNLRDVEHLQKQLEESEVAKERILQSKKKI 1422
Query: 451 QQELFRKSLQVLXECQ*TECGLERQYRKFQ 540
QQEL S++ L + + E++ +KF+
Sbjct: 1423 QQELEDSSME-LENVRASHRDSEKRQKKFE 1451
>AC006830-7|AAK68613.2| 479|Caenorhabditis elegans Hypothetical
protein ZK105.6 protein.
Length = 479
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -3
Query: 464 NNSCCDLACFISNSASSIRLFL--KAATRLVLKSMSSSLALAD 342
NN C D F +NS + + +F KA T+ ++ ++ + A+ D
Sbjct: 414 NNKCLDFDFFATNSKAKVEIFTTKKACTKTIMANVCGAKAVKD 456
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 244 LRRQLDT*VSSRAPLSLRERLSCSTGECPP 155
LR+ DT SS++P + E+ +G+CPP
Sbjct: 489 LRKAGDTCRSSKSPCDVAEQCDGKSGDCPP 518
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 244 LRRQLDT*VSSRAPLSLRERLSCSTGECPP 155
LR+ DT SS++P + E+ +G+CPP
Sbjct: 489 LRKAGDTCRSSKSPCDVAEQCDGKSGDCPP 518
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = +1
Query: 142 QDLKLADTLRYYMRDAHAAKAVLVRRLRCLAAYEAANRNLEKARAKNKDVHAAEQGQAEA 321
+ ++ A LR ++DA L + L +YEA N L++ AK + EQ +
Sbjct: 1422 RQVRPASGLRERLQDADVRN--LEKTNTALMSYEAVNEELDRLDAKQNTMTIDEQRRYRE 1479
Query: 322 CAKFEQLSARAREELIDFRT 381
+RAR+ L + R+
Sbjct: 1480 LLNVVAEQSRARKLLSEIRS 1499
>AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical
protein C31B8.8 protein.
Length = 579
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +1
Query: 238 YEAANRNLEKARAKNKDVHAAEQGQAEACAKFEQLSARAREELIDFRTRRVAAFRKSLIE 417
Y + +L+ D+ +AEQ A KF++ + A+ +D T+ A + +
Sbjct: 66 YVPPSNSLQSRNGMAGDIQSAEQVFKSAIRKFQEFAGIAKTGFLDAATKAKMALSRCGVT 125
Query: 418 LAELEIKHARSQ 453
A L + SQ
Sbjct: 126 DAPLALTSGSSQ 137
>AF003135-5|AAK18990.1| 678|Caenorhabditis elegans Hypothetical
protein W03F11.6b protein.
Length = 678
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = +1
Query: 142 QDLKLADTLRYYMRDAHAAKAVLVRRLRCLAAYEAANRNLEKARAKNKDVHAAEQGQAEA 321
+ ++ A LR ++DA L + L +YEA N L++ AK + EQ +
Sbjct: 440 RQVRPASGLRERLQDADVRN--LEKTNTALMSYEAVNEELDRLDAKQNTMTIDEQRRYRE 497
Query: 322 CAKFEQLSARAREELIDFRT 381
+RAR+ L + R+
Sbjct: 498 LLNVVAEQSRARKLLSEIRS 517
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = +1
Query: 142 QDLKLADTLRYYMRDAHAAKAVLVRRLRCLAAYEAANRNLEKARAKNKDVHAAEQGQAEA 321
+ ++ A LR ++DA L + L +YEA N L++ AK + EQ +
Sbjct: 1420 RQVRPASGLRERLQDADVRN--LEKTNTALMSYEAVNEELDRLDAKQNTMTIDEQRRYRE 1477
Query: 322 CAKFEQLSARAREELIDFRT 381
+RAR+ L + R+
Sbjct: 1478 LLNVVAEQSRARKLLSEIRS 1497
>AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 579
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +1
Query: 238 YEAANRNLEKARAKNKDVHAAEQGQAEACAKFEQLSARAREELIDFRTRRVAAFRKSLIE 417
Y + +L+ D+ +AEQ A KF++ + A+ +D T+ A + +
Sbjct: 66 YVPPSNSLQSRNGMAGDIQSAEQVFKSAIRKFQEFAGIAKTGFLDAATKAKMALSRCGVT 125
Query: 418 LAELEIKHARSQ 453
A L + SQ
Sbjct: 126 DAPLALTSGSSQ 137
>U80953-5|AAO61446.3| 317|Caenorhabditis elegans Dachsund
transcription factor homologprotein 1, isoform b
protein.
Length = 317
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +1
Query: 406 SLIELAELEIKHARSQQELFRKSLQVLXECQ*TECGLERQYRK 534
SLIELA + KH R + R +QVL E ER RK
Sbjct: 227 SLIELASQQFKHEREELWKERSEIQVLRESFHKIVQEERDLRK 269
>U80953-4|AAB52555.2| 420|Caenorhabditis elegans Dachsund
transcription factor homologprotein 1, isoform a
protein.
Length = 420
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +1
Query: 406 SLIELAELEIKHARSQQELFRKSLQVLXECQ*TECGLERQYRK 534
SLIELA + KH R + R +QVL E ER RK
Sbjct: 330 SLIELASQQFKHEREELWKERSEIQVLRESFHKIVQEERDLRK 372
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 470 NHFKCLXSVSELNAAWNDN-IGNSNSKQAIITLISLPVKF 586
+HF+CL S++ LN NDN I + + ++ L+ L V +
Sbjct: 26 DHFQCLTSLTRLNL--NDNQIEKLENLETLVNLVFLDVSY 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,895,185
Number of Sequences: 27780
Number of extensions: 270903
Number of successful extensions: 821
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -