Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0011
         (661 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    24   1.5  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    24   1.5  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    24   1.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   2.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   2.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   2.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   3.4  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 449 HSRSCLGNHFKCLXSVSELNAAWND 523
           HS   L N+FKCL       A  N+
Sbjct: 39  HSDRLLNNYFKCLMDEGRCTAEGNE 63


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 449 HSRSCLGNHFKCLXSVSELNAAWND 523
           HS   L N+FKCL       A  N+
Sbjct: 39  HSDRLLNNYFKCLMDEGRCTAEGNE 63


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 449 HSRSCLGNHFKCLXSVSELNAAWND 523
           HS   L N+FKCL       A  N+
Sbjct: 39  HSDRLLNNYFKCLMDEGRCTAEGNE 63


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 270 RLLQVPVGCFVGS*TPESPHEHRFRCVSVSHV 175
           R   +PVG      T E+P ++R+ C   S V
Sbjct: 261 RFFGLPVGVTAAIPTSENPADYRYFCPDGSKV 292


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 270 RLLQVPVGCFVGS*TPESPHEHRFRCVSVSHV 175
           R   +PVG      T E+P ++R+ C   S V
Sbjct: 261 RFFGLPVGVTAAIPTSENPADYRYFCPDGSKV 292


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 270 RLLQVPVGCFVGS*TPESPHEHRFRCVSVSHV 175
           R   +PVG      T E+P ++R+ C   S V
Sbjct: 261 RFFGLPVGVTAAIPTSENPADYRYFCPDGSKV 292


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 148 GPGRTPCDPRFSGTCQMSRRPS*GTSPWEAALW 50
           G GR+  +PR+ G+ Q + R   G +P    +W
Sbjct: 384 GTGRS-VNPRYYGSLQAAARKLLGNAPEVENIW 415


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,197
Number of Sequences: 438
Number of extensions: 3616
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)