Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0010
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    24   1.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   1.8  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    23   1.8  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   3.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.5  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   7.3  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 398 SSNAFRLEGWGNRCNYTESLELISQGGWR 484
           + N+ +  G      Y E +EL  +GGW+
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWK 312


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +1

Query: 16  NPALVAAQASGTAPTGSSVQKRPRSANSFKKKRRHP 123
           N   VA +    +PT   +++  +  N  K  R+HP
Sbjct: 476 NKTQVAVKMLKESPTSEEIRQFTQEINIMKSVRQHP 511


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 344 PLVSPHGQVPPP 379
           P V PH +VPPP
Sbjct: 12  PTVLPHQEVPPP 23


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 529 TMWAVSSSTHLSNKKNGDNF 588
           T  + SSSTH S+++  D+F
Sbjct: 384 TRKSTSSSTHTSSQQTSDSF 403


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +1

Query: 286  TRSRSSITKLSTRYLTGGRTSCESARAGTTTPPISAV 396
            T  R++ T+ +T   T   T+      GTT PP + V
Sbjct: 1056 TTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVV 1092


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 435 VVTILRA*NLYLKVGGGIYVVNVYKLQ*LLKNHVGCEL 548
           VV+++ A + Y      I +  + K   LLKN+V C L
Sbjct: 12  VVSVVFAADKYTTKYDNIDLNQILKSDRLLKNYVNCLL 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,314
Number of Sequences: 336
Number of extensions: 3456
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)