Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0010
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 30 1.8
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 29 2.4
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 29 2.4
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 29 2.4
Z74033-2|CAA98476.2| 419|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z74033-1|CAA98475.2| 460|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical pr... 29 4.2
U64857-4|AAN84850.1| 356|Caenorhabditis elegans Hypothetical pr... 27 9.8
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 24 SGGRASVRHGA-HGQLGPEAASFGELVQEETTPPAETQQRGPQLGPNQR 167
S G + HG +GQ GP+AA+ Q++ A+ Q Q QR
Sbjct: 322 SNGHPGMSHGPPNGQPGPQAAAAQHAAQQQAAAQAQAQAAAQQQQQQQR 370
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 24 SGGRASVRHGA-HGQLGPEAASFGELVQEETTPPAETQQRGPQLGPNQR 167
S G + HG +GQ GP+AA+ Q++ A+ Q Q QR
Sbjct: 322 SNGHPGMSHGPPNGQPGPQAAAAQHAAQQQAAAQAQAQAAAQQQQQQQR 370
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 29.5 bits (63), Expect = 2.4
Identities = 25/85 (29%), Positives = 37/85 (43%)
Frame = -1
Query: 458 LSSQYSYNDCPILQAETHYCFTAEIGGVVVPARADSQEVLPPVRYRVESFVMLERDRVCS 279
+ ++ +Y P Q +T T E G V+VP +LP SFV DR+
Sbjct: 5002 VDNEGNYIILPTQQVDTKEYPTDETGNVIVPITKPDGTLLP--TDSTGSFVTENGDRIEF 5059
Query: 278 GDQGRASFEDSTSLELLETDFFGLY 204
++G+ D E+L TD G Y
Sbjct: 5060 NEEGKPLGPDG---EVLATDASGNY 5081
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 29.5 bits (63), Expect = 2.4
Identities = 25/85 (29%), Positives = 37/85 (43%)
Frame = -1
Query: 458 LSSQYSYNDCPILQAETHYCFTAEIGGVVVPARADSQEVLPPVRYRVESFVMLERDRVCS 279
+ ++ +Y P Q +T T E G V+VP +LP SFV DR+
Sbjct: 5047 VDNEGNYIILPTQQVDTKEYPTDETGNVIVPITKPDGTLLP--TDSTGSFVTENGDRIEF 5104
Query: 278 GDQGRASFEDSTSLELLETDFFGLY 204
++G+ D E+L TD G Y
Sbjct: 5105 NEEGKPLGPDG---EVLATDASGNY 5126
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 29.5 bits (63), Expect = 2.4
Identities = 25/85 (29%), Positives = 37/85 (43%)
Frame = -1
Query: 458 LSSQYSYNDCPILQAETHYCFTAEIGGVVVPARADSQEVLPPVRYRVESFVMLERDRVCS 279
+ ++ +Y P Q +T T E G V+VP +LP SFV DR+
Sbjct: 5047 VDNEGNYIILPTQQVDTKEYPTDETGNVIVPITKPDGTLLP--TDSTGSFVTENGDRIEF 5104
Query: 278 GDQGRASFEDSTSLELLETDFFGLY 204
++G+ D E+L TD G Y
Sbjct: 5105 NEEGKPLGPDG---EVLATDASGNY 5126
>Z74033-2|CAA98476.2| 419|Caenorhabditis elegans Hypothetical
protein F38B7.1b protein.
Length = 419
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 311 SSQHDTLPVVGPLVSPHGQVPPPRLFLP*SSNAFRLEGWGNRCNYTE 451
SS + T P + P+ +P+GQ PPP+ + R RCNY E
Sbjct: 131 SSPYST-PQLTPMATPNGQAPPPKNPKLYKTELCRSWMDHGRCNYGE 176
>Z74033-1|CAA98475.2| 460|Caenorhabditis elegans Hypothetical
protein F38B7.1a protein.
Length = 460
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 311 SSQHDTLPVVGPLVSPHGQVPPPRLFLP*SSNAFRLEGWGNRCNYTE 451
SS + T P + P+ +P+GQ PPP+ + R RCNY E
Sbjct: 172 SSPYST-PQLTPMATPNGQAPPPKNPKLYKTELCRSWMDHGRCNYGE 217
>Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical
protein F33A8.3 protein.
Length = 208
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +3
Query: 18 PRSGGRASVRHGAHGQLGPEAASFGELVQEETTPPAETQQRGPQLGPNQRG 170
PR GGR R G G+ G S GE +T + G + G RG
Sbjct: 142 PRGGGRGGSRRGGGGRGGGRTNSGGEETARDTDGGERGGRGGGRRGGRGRG 192
>U64857-4|AAN84850.1| 356|Caenorhabditis elegans Hypothetical
protein C37C3.7 protein.
Length = 356
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 422 GW-GNRCNYTESLELISQGGWRHLRCKCL 505
GW G C+Y + + ++G W+ RC+C+
Sbjct: 111 GWKGEMCDYRPAEKCGNKGEWKGDRCECV 139
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,557,071
Number of Sequences: 27780
Number of extensions: 319090
Number of successful extensions: 944
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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