Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0009
         (579 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40799-3|AAA81481.1|  323|Caenorhabditis elegans Hypothetical pr...    33   0.11 
Z66519-14|CAA91377.2| 1146|Caenorhabditis elegans Hypothetical p...    27   7.3  
U56101-1|AAC47459.1| 1167|Caenorhabditis elegans AGE-1 protein.        27   7.3  
AL110499-5|CAB57914.1| 1146|Caenorhabditis elegans Hypothetical ...    27   7.3  
Z81453-6|CAH04639.1|  283|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>U40799-3|AAA81481.1|  323|Caenorhabditis elegans Hypothetical
           protein F42C5.5 protein.
          Length = 323

 Score = 33.5 bits (73), Expect = 0.11
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 152 LHLSLFR*DYGICILSQANNDSIGLRKIYLLWI 250
           +H + FR  YG  ++SQA NDS     ++L+WI
Sbjct: 78  VHANTFRTPYGNFLISQAPNDSTNADHLHLMWI 110


>Z66519-14|CAA91377.2| 1146|Caenorhabditis elegans Hypothetical
            protein B0334.8 protein.
          Length = 1146

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 403  CVDVYKFIWSNEKLFIHIRTI 465
            CV+ Y+ +W+N  LF+ + T+
Sbjct: 1064 CVEAYEVMWNNRDLFVSLFTL 1084


>U56101-1|AAC47459.1| 1167|Caenorhabditis elegans AGE-1 protein.
          Length = 1167

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 403  CVDVYKFIWSNEKLFIHIRTI 465
            CV+ Y+ +W+N  LF+ + T+
Sbjct: 1085 CVEAYEVMWNNRDLFVSLFTL 1105


>AL110499-5|CAB57914.1| 1146|Caenorhabditis elegans Hypothetical
            protein B0334.8 protein.
          Length = 1146

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 403  CVDVYKFIWSNEKLFIHIRTI 465
            CV+ Y+ +W+N  LF+ + T+
Sbjct: 1064 CVEAYEVMWNNRDLFVSLFTL 1084


>Z81453-6|CAH04639.1|  283|Caenorhabditis elegans Hypothetical
           protein B0250.10 protein.
          Length = 283

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -3

Query: 400 TLDILILMLFF*TIRVMSKIVIYNYRFSIVINFMSL 293
           T+ ILIL ++F   ++ +  +I N  FS+VI   S+
Sbjct: 56  TVVILILKIYFLLTQISTDFIIKNVHFSLVIPAASI 91


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,061,882
Number of Sequences: 27780
Number of extensions: 200820
Number of successful extensions: 312
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 312
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)