Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0009
         (579 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   2.2  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   8.8  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   8.8  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   8.8  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   8.8  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 147 NHYIFLYFGEITEYVSYPKLITIRLDYV 230
           N++IFLYF  +  +    +  TI LD V
Sbjct: 20  NYFIFLYFNSLVRF----RRFTIELDKV 43


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 311 DNRETIIIYNN 343
           DN+ T+IIY N
Sbjct: 206 DNKNTLIIYQN 216


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 147 NHYIFLYFGEITEYVSYPKLI 209
           NHY++LY  +   Y+S   L+
Sbjct: 109 NHYLWLYHDKTLLYMSKLTLV 129


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 456 DVNKQFLVRPNKFVNVNAILL 394
           D NK+   + N+F+N N+ LL
Sbjct: 197 DGNKELGEQMNRFINENSELL 217


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = +2

Query: 530 RELILDYCMHIKYT 571
           R++IL+Y ++IKY+
Sbjct: 58  RKMILEYELYIKYS 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,383
Number of Sequences: 438
Number of extensions: 3171
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)