Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0007
         (665 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058257-1|AAL13486.1|  465|Drosophila melanogaster GH01515p pro...    73   4e-13
AF181686-1|AAD54422.1|  465|Drosophila melanogaster membrane pro...    73   4e-13
AE014296-2737|AAF49464.2|  465|Drosophila melanogaster CG4672-PA...    73   4e-13
BT003570-1|AAO39574.1|  614|Drosophila melanogaster LD45290p pro...    30   3.3  
AY058496-1|AAL13725.1|  647|Drosophila melanogaster LD03170p pro...    30   3.3  
AF255674-1|AAG18329.1|  647|Drosophila melanogaster rho guanine ...    30   3.3  
AE014296-1222|AAN12050.1|  600|Drosophila melanogaster CG8606-PB...    30   3.3  
AE014296-1221|AAF50584.1|  647|Drosophila melanogaster CG8606-PA...    30   3.3  
BT011377-1|AAR96169.1|  958|Drosophila melanogaster LP10202p pro...    29   4.3  
AY051933-1|AAK93357.1|  739|Drosophila melanogaster LD41490p pro...    29   4.3  
AE014297-1897|AAS65152.1|  959|Drosophila melanogaster CG3563-PB...    29   4.3  
AE014297-1893|AAF55097.2| 1153|Drosophila melanogaster CG3563-PA...    29   4.3  
AY060256-1|AAL25295.1|  331|Drosophila melanogaster GH08307p pro...    28   9.9  
AE013599-1120|AAS64876.1|  771|Drosophila melanogaster CG12052-P...    28   9.9  
AE013599-1119|AAF58781.3|  878|Drosophila melanogaster CG12052-P...    28   9.9  
AB107348-1|BAC67653.1|  771|Drosophila melanogaster Lola protein...    28   9.9  
AB107328-1|BAC67633.1|  771|Drosophila melanogaster Lola protein...    28   9.9  
AB107308-1|BAC67613.1|  771|Drosophila melanogaster Lola protein...    28   9.9  
AB107288-1|BAC67593.1|  771|Drosophila melanogaster Lola protein...    28   9.9  

>AY058257-1|AAL13486.1|  465|Drosophila melanogaster GH01515p
           protein.
          Length = 465

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 30/49 (61%), Positives = 40/49 (81%)
 Frame = +2

Query: 440 AVGYLAVYRITFATCLFFLLMALIMIGVKSSKDPRAGIQNGFWAIKYLL 586
           A+GY+AVYR+ F    FF LM+LIM+GVKSS+DPR+ IQN FW +K+L+
Sbjct: 98  ALGYMAVYRVCFGMACFFALMSLIMLGVKSSRDPRSHIQNNFWPLKFLI 146



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
 Frame = +1

Query: 322 ITLAPGLHNELQKLPFCTNATDSTVTGLLP----GNFKVDCD 435
           I L+PGL + L+K+PFC N+T S  +G L     G+ +VDC+
Sbjct: 55  IALSPGLQDTLKKMPFCINSTSSYSSGALSAVSGGSLQVDCE 96



 Score = 39.1 bits (87), Expect = 0.005
 Identities = 20/51 (39%), Positives = 27/51 (52%)
 Frame = +3

Query: 159 MGAVLGLCSAAQLXXXXXXXXXXXXXXXXXXXTNSTSSRLMYALMLVLVTI 311
           MGA LG+CSAAQ                    TN++SSR MYA +L++ T+
Sbjct: 1   MGAALGICSAAQCAMCCGGTAASMCCSACPSCTNASSSRFMYAFILLVGTV 51


>AF181686-1|AAD54422.1|  465|Drosophila melanogaster membrane
           protein TMS1d protein.
          Length = 465

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 30/49 (61%), Positives = 40/49 (81%)
 Frame = +2

Query: 440 AVGYLAVYRITFATCLFFLLMALIMIGVKSSKDPRAGIQNGFWAIKYLL 586
           A+GY+AVYR+ F    FF LM+LIM+GVKSS+DPR+ IQN FW +K+L+
Sbjct: 98  ALGYMAVYRVCFGMACFFALMSLIMLGVKSSRDPRSHIQNNFWPLKFLI 146



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
 Frame = +1

Query: 322 ITLAPGLHNELQKLPFCTNATDSTVTGLLP----GNFKVDCD 435
           I L+PGL + L+K+PFC N+T S  +G L     G+ +VDC+
Sbjct: 55  IALSPGLQDTLKKMPFCINSTSSYSSGALSAVSGGSLQVDCE 96



 Score = 39.1 bits (87), Expect = 0.005
 Identities = 20/51 (39%), Positives = 27/51 (52%)
 Frame = +3

Query: 159 MGAVLGLCSAAQLXXXXXXXXXXXXXXXXXXXTNSTSSRLMYALMLVLVTI 311
           MGA LG+CSAAQ                    TN++SSR MYA +L++ T+
Sbjct: 1   MGAALGICSAAQCAMCCGGTAASMCCSACPSCTNASSSRFMYAFILLVGTV 51


>AE014296-2737|AAF49464.2|  465|Drosophila melanogaster CG4672-PA
           protein.
          Length = 465

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 30/49 (61%), Positives = 40/49 (81%)
 Frame = +2

Query: 440 AVGYLAVYRITFATCLFFLLMALIMIGVKSSKDPRAGIQNGFWAIKYLL 586
           A+GY+AVYR+ F    FF LM+LIM+GVKSS+DPR+ IQN FW +K+L+
Sbjct: 98  ALGYMAVYRVCFGMACFFALMSLIMLGVKSSRDPRSHIQNNFWPLKFLI 146



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
 Frame = +1

Query: 322 ITLAPGLHNELQKLPFCTNATDSTVTGLLP----GNFKVDCD 435
           I L+PGL + L+K+PFC N+T S  +G L     G+ +VDC+
Sbjct: 55  IALSPGLQDTLKKMPFCINSTSSYSSGALSAVSGGSLQVDCE 96



 Score = 39.1 bits (87), Expect = 0.005
 Identities = 20/51 (39%), Positives = 27/51 (52%)
 Frame = +3

Query: 159 MGAVLGLCSAAQLXXXXXXXXXXXXXXXXXXXTNSTSSRLMYALMLVLVTI 311
           MGA LG+CSAAQ                    TN++SSR MYA +L++ T+
Sbjct: 1   MGAALGICSAAQCAMCCGGTAASMCCSACPSCTNASSSRFMYAFILLVGTV 51


>BT003570-1|AAO39574.1|  614|Drosophila melanogaster LD45290p
           protein.
          Length = 614

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 403 LLPGNFKVDCDESGWIFG 456
           +LPGNFK+ C   G IFG
Sbjct: 306 MLPGNFKLTCQSDGIIFG 323


>AY058496-1|AAL13725.1|  647|Drosophila melanogaster LD03170p
           protein.
          Length = 647

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 403 LLPGNFKVDCDESGWIFG 456
           +LPGNFK+ C   G IFG
Sbjct: 339 MLPGNFKLTCQSDGIIFG 356


>AF255674-1|AAG18329.1|  647|Drosophila melanogaster rho guanine
           nucleotide exchangefactor 4 protein.
          Length = 647

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 403 LLPGNFKVDCDESGWIFG 456
           +LPGNFK+ C   G IFG
Sbjct: 339 MLPGNFKLTCQSDGIIFG 356


>AE014296-1222|AAN12050.1|  600|Drosophila melanogaster CG8606-PB,
           isoform B protein.
          Length = 600

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 403 LLPGNFKVDCDESGWIFG 456
           +LPGNFK+ C   G IFG
Sbjct: 292 MLPGNFKLTCQSDGIIFG 309


>AE014296-1221|AAF50584.1|  647|Drosophila melanogaster CG8606-PA,
           isoform A protein.
          Length = 647

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 403 LLPGNFKVDCDESGWIFG 456
           +LPGNFK+ C   G IFG
Sbjct: 339 MLPGNFKLTCQSDGIIFG 356


>BT011377-1|AAR96169.1|  958|Drosophila melanogaster LP10202p
           protein.
          Length = 958

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 323 IQHTNSYQHQH*CIHKTGGGGIGA 252
           ++H  SY+ QH    KTGG G GA
Sbjct: 256 VEHLQSYERQHGDAQKTGGEGQGA 279


>AY051933-1|AAK93357.1|  739|Drosophila melanogaster LD41490p
           protein.
          Length = 739

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 323 IQHTNSYQHQH*CIHKTGGGGIGA 252
           ++H  SY+ QH    KTGG G GA
Sbjct: 37  VEHLQSYERQHGDAQKTGGEGQGA 60


>AE014297-1897|AAS65152.1|  959|Drosophila melanogaster CG3563-PB,
           isoform B protein.
          Length = 959

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 323 IQHTNSYQHQH*CIHKTGGGGIGA 252
           ++H  SY+ QH    KTGG G GA
Sbjct: 257 VEHLQSYERQHGDAQKTGGEGQGA 280


>AE014297-1893|AAF55097.2| 1153|Drosophila melanogaster CG3563-PA,
           isoform A protein.
          Length = 1153

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 323 IQHTNSYQHQH*CIHKTGGGGIGA 252
           ++H  SY+ QH    KTGG G GA
Sbjct: 451 VEHLQSYERQHGDAQKTGGEGQGA 474


>AY060256-1|AAL25295.1|  331|Drosophila melanogaster GH08307p
           protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -2

Query: 352 VHYVIRELK*YSTQIVTSTSISAYIRREEVELVQDGHAEQHSEQAVLPQQ 203
           + Y I  L   +T    +TS+    +   +++V+  H +QH +Q   PQQ
Sbjct: 72  IQYTIPALTKNATTNTNTTSLLHKPQATTIQIVKQQHQQQHQQQHQHPQQ 121


>AE013599-1120|AAS64876.1|  771|Drosophila melanogaster CG12052-PW,
           isoform W protein.
          Length = 771

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -2

Query: 352 VHYVIRELK*YSTQIVTSTSISAYIRREEVELVQDGHAEQHSEQAVLPQQ 203
           + Y I  L   +T    +TS+    +   +++V+  H +QH +Q   PQQ
Sbjct: 512 IQYTIPALTKNATTNTNTTSLLHKPQATTIQIVKQQHQQQHQQQHQHPQQ 561


>AE013599-1119|AAF58781.3|  878|Drosophila melanogaster CG12052-PN,
           isoform N protein.
          Length = 878

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -2

Query: 352 VHYVIRELK*YSTQIVTSTSISAYIRREEVELVQDGHAEQHSEQAVLPQQ 203
           + Y I  L   +T    +TS+    +   +++V+  H +QH +Q   PQQ
Sbjct: 512 IQYTIPALTKNATTNTNTTSLLHKPQATTIQIVKQQHQQQHQQQHQHPQQ 561


>AB107348-1|BAC67653.1|  771|Drosophila melanogaster Lola protein
           isoform Q protein.
          Length = 771

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -2

Query: 352 VHYVIRELK*YSTQIVTSTSISAYIRREEVELVQDGHAEQHSEQAVLPQQ 203
           + Y I  L   +T    +TS+    +   +++V+  H +QH +Q   PQQ
Sbjct: 512 IQYTIPALTKNATTNTNTTSLLHKPQATTIQIVKQQHQQQHQQQHQHPQQ 561


>AB107328-1|BAC67633.1|  771|Drosophila melanogaster Lola protein
           isoform Q protein.
          Length = 771

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -2

Query: 352 VHYVIRELK*YSTQIVTSTSISAYIRREEVELVQDGHAEQHSEQAVLPQQ 203
           + Y I  L   +T    +TS+    +   +++V+  H +QH +Q   PQQ
Sbjct: 512 IQYTIPALTKNATTNTNTTSLLHKPQATTIQIVKQQHQQQHQQQHQHPQQ 561


>AB107308-1|BAC67613.1|  771|Drosophila melanogaster Lola protein
           isoform Q protein.
          Length = 771

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -2

Query: 352 VHYVIRELK*YSTQIVTSTSISAYIRREEVELVQDGHAEQHSEQAVLPQQ 203
           + Y I  L   +T    +TS+    +   +++V+  H +QH +Q   PQQ
Sbjct: 512 IQYTIPALTKNATTNTNTTSLLHKPQATTIQIVKQQHQQQHQQQHQHPQQ 561


>AB107288-1|BAC67593.1|  771|Drosophila melanogaster Lola protein
           isoform Q protein.
          Length = 771

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -2

Query: 352 VHYVIRELK*YSTQIVTSTSISAYIRREEVELVQDGHAEQHSEQAVLPQQ 203
           + Y I  L   +T    +TS+    +   +++V+  H +QH +Q   PQQ
Sbjct: 512 IQYTIPALTKNATTNTNTTSLLHKPQATTIQIVKQQHQQQHQQQHQHPQQ 561


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,645,479
Number of Sequences: 53049
Number of extensions: 664460
Number of successful extensions: 1642
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1639
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)