Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0006
         (680 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23C25 Cluster: Putative uncharacterized protein; n=1; ...    34   3.7  
UniRef50_Q4YAS9 Cluster: Putative uncharacterized protein; n=1; ...    33   8.5  
UniRef50_Q4XA70 Cluster: Putative uncharacterized protein; n=1; ...    33   8.5  

>UniRef50_Q23C25 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1426

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 21/74 (28%), Positives = 33/74 (44%)
 Frame = +2

Query: 365  MNALFQRLDKNQLCVYLLFYRDVFRFNKIRNSYILY*LFQNVTSTHELISNVIFSNKIYF 544
            M  +FQ  ++N   +  L       +NK  N      + Q VT+ H L + V+ SNK   
Sbjct: 917  MKTIFQNSERNTQIINSLNKEQQITYNKRANMLSESDILQMVTNEHPLQAQVLLSNKTKA 976

Query: 545  YEFIEIGTVPALRV 586
            Y+  + G+    RV
Sbjct: 977  YDIDQRGSFEKNRV 990


>UniRef50_Q4YAS9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 77

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 17/60 (28%), Positives = 24/60 (40%)
 Frame = -2

Query: 670 CI*ILKLDFL*NIYGFFRNRVLIYIFFHYAECRYCADLYKFIKIYFIAKNHITYELVCTC 491
           C+  L + F    Y F     L   FF    C  C  + K     FI + H+ Y ++ TC
Sbjct: 2   CVSFLHITFYAISYCFLFFPSLFSFFFTNKMCELCCVMQKKYSDLFIKRTHLIYNIIFTC 61


>UniRef50_Q4XA70 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 80

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
 Frame = +2

Query: 368 NALFQRLDKNQLCVYLLFYRDVFRF----NKIRNSYILY 472
           N+ F+RL  N LC  LLFY++V  F    + +R  YILY
Sbjct: 27  NSNFKRLKTNNLCCILLFYKNVKNFPISMHILRLYYILY 65


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,619,308
Number of Sequences: 1657284
Number of extensions: 11176634
Number of successful extensions: 22756
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22747
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)