Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0004
         (595 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    27   0.16 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   5.9  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   5.9  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   5.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.8  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 476 EFIYIRQTNHTKAF-LLANIILGCIFFIGKYV 568
           E I IR  N    F  +ANIIL  + F+G ++
Sbjct: 67  ELIQIRTINFVATFRTIANIILMAVLFLGTFI 98


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 425 IILATKQLKDWFVNK 469
           ++L+ +Q+K WF N+
Sbjct: 270 LVLSERQIKIWFQNR 284


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 479 IHTIYLQTNLLTV 441
           +HTI+L  N+LTV
Sbjct: 119 LHTIFLVCNVLTV 131


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 425 IILATKQLKDWFVNK 469
           ++L+ +Q+K WF N+
Sbjct: 270 LVLSERQIKIWFQNR 284


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = -2

Query: 306 IKFIWWYTHTKNITLLIIINDTDSQICFHRIISSNKPIKAGN 181
           I  +W  T  + +  L  +   D   C HRI+  +  +K  N
Sbjct: 305 IATMWHETPEEMMEFLKSVFRLDQDQCSHRIVREHLGLKHDN 346


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 480 NSHHLFTNQSFNCFVANIIFFP 415
           NS+H   +  F     N++F+P
Sbjct: 156 NSNHWVRSGLFALITGNVLFYP 177


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 480 NSHHLFTNQSFNCFVANIIFFP 415
           NS+H   +  F     N++F+P
Sbjct: 112 NSNHWVRSGLFALITGNVLFYP 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,828
Number of Sequences: 336
Number of extensions: 3412
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)