Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S13A01NGRL0001_B20
(285 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 32 0.058
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 32 0.058
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 30 0.23
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 30 0.23
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 30 0.23
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 30 0.23
U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon gu... 30 0.23
U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon gu... 30 0.23
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 30 0.23
AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFOR... 30 0.23
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 28 0.94
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 28 0.94
AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated... 28 0.94
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 28 0.94
AF025453-4|ABC48262.1| 905|Caenorhabditis elegans Hypothetical ... 28 1.2
AF025453-3|AAM98053.2| 828|Caenorhabditis elegans Hypothetical ... 28 1.2
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 27 1.6
Z35640-4|CAA84704.1| 707|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical pr... 26 3.8
Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical pr... 26 3.8
AC024863-2|AAP31420.1| 366|Caenorhabditis elegans Prion-like-(q... 26 3.8
AC024863-1|AAF60877.1| 481|Caenorhabditis elegans Prion-like-(q... 26 3.8
AL132858-9|CAC42356.1| 110|Caenorhabditis elegans Hypothetical ... 26 5.0
U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily ass... 25 6.6
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 25 6.6
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 25 6.6
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 25 6.6
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein. 25 6.6
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated... 25 6.6
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated... 25 6.6
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 25 6.6
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 25 6.6
Z92832-8|CAB54227.1| 99|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z68120-4|CAA92202.1| 328|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 25 8.7
U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g ... 25 8.7
U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g ... 25 8.7
AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein. 25 8.7
AC024776-9|AAK68462.1| 244|Caenorhabditis elegans Set (trithora... 25 8.7
AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protei... 25 8.7
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 32.3 bits (70), Expect = 0.058
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 6 ADPNADVTDFDRRITA--GPDGNLYFTIVTKEDVSDIYKYVCTAKNAA--VDEEVVLVEY 173
+DP+AD D DR I +LY + T +V ++ Y+ TA N + V E ++V
Sbjct: 343 SDPDADNADLDRNIEKFNWDSDDLYRSTDTDSEVENLLDYLSTAMNISDKVFSEFMVVGE 402
Query: 174 EIKGVTKDNSGYKGEPVPQYV 236
E + K+ P+P+++
Sbjct: 403 ETTPLLKEKLKTFQLPMPRFL 423
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 32.3 bits (70), Expect = 0.058
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 6 ADPNADVTDFDRRITA--GPDGNLYFTIVTKEDVSDIYKYVCTAKNAA--VDEEVVLVEY 173
+DP+AD D DR I +LY + T +V ++ Y+ TA N + V E ++V
Sbjct: 343 SDPDADNADLDRNIEKFNWDSDDLYRSTDTDSEVENLLDYLSTAMNISDKVFSEFMVVGE 402
Query: 174 EIKGVTKDNSGYKGEPVPQYV 236
E + K+ P+P+++
Sbjct: 403 ETTPLLKEKLKTFQLPMPRFL 423
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 30.3 bits (65), Expect = 0.23
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +3
Query: 42 RITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEP 221
R + PDG+ + TI K +SD KY+C A N A ++ L+ + D S G P
Sbjct: 3527 RYSISPDGS-HITI-NKAKLSDGGKYICRASNEAGTSDIDLILKILVPPKIDKSNIIGNP 3584
Query: 222 V 224
+
Sbjct: 3585 L 3585
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 30.3 bits (65), Expect = 0.23
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +3
Query: 42 RITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEP 221
R + PDG+ + TI K +SD KY+C A N A ++ L+ + D S G P
Sbjct: 3527 RYSISPDGS-HITI-NKAKLSDGGKYICRASNEAGTSDIDLILKILVPPKIDKSNIIGNP 3584
Query: 222 V 224
+
Sbjct: 3585 L 3585
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 30.3 bits (65), Expect = 0.23
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +3
Query: 42 RITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEP 221
R + PDG+ + TI K +SD KY+C A N A ++ L+ + D S G P
Sbjct: 3527 RYSISPDGS-HITI-NKAKLSDGGKYICRASNEAGTSDIDLILKILVPPKIDKSNIIGNP 3584
Query: 222 V 224
+
Sbjct: 3585 L 3585
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 30.3 bits (65), Expect = 0.23
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +3
Query: 42 RITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEP 221
R + PDG+ + TI K +SD KY+C A N A ++ L+ + D S G P
Sbjct: 3527 RYSISPDGS-HITI-NKAKLSDGGKYICRASNEAGTSDIDLILKILVPPKIDKSNIIGNP 3584
Query: 222 V 224
+
Sbjct: 3585 L 3585
>U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform b protein.
Length = 1328
Score = 30.3 bits (65), Expect = 0.23
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 GADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIK 182
G +P T I++ G L+F V + D Y CTA+N + + ++ ++
Sbjct: 180 GKEPGHFETISSSHISSNEQGTLFFHYVNETDFKSDRYYTCTAENIELKDYKFGNQFSLQ 239
Query: 183 GV-TKDNSGYKGEPVPQYVSK 242
K S + P QYV++
Sbjct: 240 ITNNKRRSLQQMPPTEQYVNQ 260
>U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform c protein.
Length = 1331
Score = 30.3 bits (65), Expect = 0.23
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 GADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIK 182
G +P T I++ G L+F V + D Y CTA+N + + ++ ++
Sbjct: 180 GKEPGHFETISSSHISSNEQGTLFFHYVNETDFKSDRYYTCTAENIELKDYKFGNQFSLQ 239
Query: 183 GV-TKDNSGYKGEPVPQYVSK 242
K S + P QYV++
Sbjct: 240 ITNNKRRSLQQMPPTEQYVNQ 260
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 30.3 bits (65), Expect = 0.23
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +3
Query: 42 RITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEP 221
R + PDG+ + TI K +SD KY+C A N A ++ L+ + D S G P
Sbjct: 3527 RYSISPDGS-HITI-NKAKLSDGGKYICRASNEAGTSDIDLILKILVPPKIDKSNIIGNP 3584
Query: 222 V 224
+
Sbjct: 3585 L 3585
>AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFORM
protein.
Length = 1331
Score = 30.3 bits (65), Expect = 0.23
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 GADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIK 182
G +P T I++ G L+F V + D Y CTA+N + + ++ ++
Sbjct: 180 GKEPGHFETISSSHISSNEQGTLFFHYVNETDFKSDRYYTCTAENIELKDYKFGNQFSLQ 239
Query: 183 GV-TKDNSGYKGEPVPQYVSK 242
K S + P QYV++
Sbjct: 240 ITNNKRRSLQQMPPTEQYVNQ 260
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 28.3 bits (60), Expect = 0.94
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +3
Query: 6 ADPNADVTDFDRRITAGPDGNLY-----FTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVE 170
+DP A++T + + PD N+ I++ +SD Y C A N A + VE
Sbjct: 137 SDPKAELTWYKDGVVVQPDANVIRASDGSLIMSAARLSDSGNYTCEATNVANSRKTDPVE 196
Query: 171 YEI 179
+I
Sbjct: 197 VQI 199
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 28.3 bits (60), Expect = 0.94
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +3
Query: 6 ADPNADVTDFDRRITAGPDGNLY-----FTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVE 170
+DP A++T + + PD N+ I++ +SD Y C A N A + VE
Sbjct: 165 SDPKAELTWYKDGVVVQPDANVIRASDGSLIMSAARLSDSGNYTCEATNVANSRKTDPVE 224
Query: 171 YEI 179
+I
Sbjct: 225 VQI 227
>AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated
protein 5, isoform b protein.
Length = 567
Score = 28.3 bits (60), Expect = 0.94
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +3
Query: 6 ADPNADVTDFDRRITAGPDGNLY-----FTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVE 170
+DP A++T + + PD N+ I++ +SD Y C A N A + VE
Sbjct: 137 SDPKAELTWYKDGVVVQPDANVIRASDGSLIMSAARLSDSGNYTCEATNVANSRKTDPVE 196
Query: 171 YEI 179
+I
Sbjct: 197 VQI 199
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 28.3 bits (60), Expect = 0.94
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +3
Query: 6 ADPNADVTDFDRRITAGPDGNLY-----FTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVE 170
+DP A++T + + PD N+ I++ +SD Y C A N A + VE
Sbjct: 137 SDPKAELTWYKDGVVVQPDANVIRASDGSLIMSAARLSDSGNYTCEATNVANSRKTDPVE 196
Query: 171 YEI 179
+I
Sbjct: 197 VQI 199
>AF025453-4|ABC48262.1| 905|Caenorhabditis elegans Hypothetical
protein C08F1.5b protein.
Length = 905
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 236 YVLRDRLTFVPRVVFCHSLDLI 171
YV+ D +TF RVVF H DL+
Sbjct: 752 YVVDDSVTFKARVVFTHITDLL 773
>AF025453-3|AAM98053.2| 828|Caenorhabditis elegans Hypothetical
protein C08F1.5a protein.
Length = 828
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 236 YVLRDRLTFVPRVVFCHSLDLI 171
YV+ D +TF RVVF H DL+
Sbjct: 675 YVVDDSVTFKARVVFTHITDLL 696
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 27.5 bits (58), Expect = 1.6
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +3
Query: 90 KEDVSDIYKYVCTAK-NAAVDEEVVLVEYEIKGVTKDNSGYK--GEPVPQYVSKDMMAKA 260
+ED+ ++ Y+ TAK A E++ VE+ + K K P Y+S + KA
Sbjct: 268 EEDIQIVHNYIVTAKVKAYYSEKLKNVEFSLDKKAKSEKASKLLNAPSTPYMSHLSVTKA 327
Query: 261 GD 266
D
Sbjct: 328 KD 329
>Z35640-4|CAA84704.1| 707|Caenorhabditis elegans Hypothetical
protein F43D9.3a protein.
Length = 707
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = -1
Query: 282 VDHGNNRQL*P-SYPCLRIEGPAHLCTQ--SCLLSLP 181
VD+G + L +Y C + PA C Q C LSLP
Sbjct: 653 VDYGKRKNLMRVTYGCTELVNPAQFCDQVSCCSLSLP 689
>Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +3
Query: 39 RRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVE 170
R + G +L FT+ ++ CTA + DE+++L++
Sbjct: 617 RTVKLGQSLDLVFTVDNSTSARHVFVKKCTAYDQNGDEKIILIK 660
>Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +3
Query: 39 RRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVE 170
R + G +L FT+ ++ CTA + DE+++L++
Sbjct: 617 RTVKLGQSLDLVFTVDNSTSARHVFVKKCTAYDQNGDEKIILIK 660
>AC024863-2|AAP31420.1| 366|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 89,
isoform b protein.
Length = 366
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 92 FSDDCEVEVSIRPSCDAAIKVSHISVRISS 3
FS C + I PSCD K SH++ +++
Sbjct: 280 FSISCSGSL-IGPSCDLTCKASHVNANVAA 308
>AC024863-1|AAF60877.1| 481|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 89,
isoform a protein.
Length = 481
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 92 FSDDCEVEVSIRPSCDAAIKVSHISVRISS 3
FS C + I PSCD K SH++ +++
Sbjct: 280 FSISCSGSL-IGPSCDLTCKASHVNANVAA 308
>AL132858-9|CAC42356.1| 110|Caenorhabditis elegans Hypothetical
protein Y113G7A.15 protein.
Length = 110
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Frame = +3
Query: 18 ADVTDFD---RRITAGPDGNLYFTI 83
AD+ DF+ RR++A PD + Y+ I
Sbjct: 52 ADILDFEMYQRRLSAAPDNSYYYQI 76
>U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform c protein.
Length = 484
Score = 25.4 bits (53), Expect = 6.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 192 KDNSGYKGEPVPQYVSKDMMAKAGDCYHDL 281
K SG K EP Q + ++AKAGD HD+
Sbjct: 54 KKESGEKEEP--QTSVESVLAKAGDKLHDV 81
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 25.4 bits (53), Expect = 6.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 192 KDNSGYKGEPVPQYVSKDMMAKAGDCYHDL 281
K SG K EP Q + ++AKAGD HD+
Sbjct: 54 KKESGEKEEP--QTSVESVLAKAGDKLHDV 81
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 25.4 bits (53), Expect = 6.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 192 KDNSGYKGEPVPQYVSKDMMAKAGDCYHDL 281
K SG K EP Q + ++AKAGD HD+
Sbjct: 54 KKESGEKEEP--QTSVESVLAKAGDKLHDV 81
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 25.4 bits (53), Expect = 6.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 192 KDNSGYKGEPVPQYVSKDMMAKAGDCYHDL 281
K SG K EP Q + ++AKAGD HD+
Sbjct: 54 KKESGEKEEP--QTSVESVLAKAGDKLHDV 81
>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
Length = 1338
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 9 DPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKN 137
D + + + R+T D N+ I+ D+ +YVCTA N
Sbjct: 910 DFQGKILESNDRVTIEQDNNVARLILNHAAPYDLGEYVCTAIN 952
>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
protein 89, isoform c protein.
Length = 1393
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 9 DPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKN 137
D + + + R+T D N+ I+ D+ +YVCTA N
Sbjct: 874 DFQGKILESNDRVTIEQDNNVARLILNHAAPYDLGEYVCTAIN 916
>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
protein 89, isoform d protein.
Length = 1396
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 9 DPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKN 137
D + + + R+T D N+ I+ D+ +YVCTA N
Sbjct: 877 DFQGKILESNDRVTIEQDNNVARLILNHAAPYDLGEYVCTAIN 919
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 9 DPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKN 137
D + + + R+T D N+ I+ D+ +YVCTA N
Sbjct: 6922 DFQGKILESNDRVTIEQDNNVARLILNHAAPYDLGEYVCTAIN 6964
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 9 DPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKN 137
D + + + R+T D N+ I+ D+ +YVCTA N
Sbjct: 7562 DFQGKILESNDRVTIEQDNNVARLILNHAAPYDLGEYVCTAIN 7604
>Z92832-8|CAB54227.1| 99|Caenorhabditis elegans Hypothetical
protein F31D4.9 protein.
Length = 99
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +3
Query: 6 ADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKN 137
+DP + D + R T + NL+F I ++++ K +A N
Sbjct: 45 SDPASSKIDLNDRTTCSAEPNLFFVIFLSKNLNFSSKVFLSAVN 88
>Z68120-4|CAA92202.1| 328|Caenorhabditis elegans Hypothetical
protein T24C2.4 protein.
Length = 328
Score = 25.0 bits (52), Expect = 8.7
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = -2
Query: 239 AYVLRDRLTFVPRVVFCHSLDLILYQ-NYLFVDRCVLGG--AYVFINVTDVFFSDDCEVE 69
A +RD L P +FCH LD Y N + R G A N++ ++ S+D +
Sbjct: 251 AIKIRDILLKSPNFIFCH-LDFPPYSLNLNDIARVFCPGQDATDEENISFIYKSNDFNFK 309
Query: 68 VSIRPSCDAAIKVS 27
+ + P +K+S
Sbjct: 310 ICMNPCSMKVVKLS 323
>Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical
protein R166.5b protein.
Length = 707
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 171 YEIKGVTKDNSGYKGEPVPQYVSKD 245
YE + V + G P+P+YV +D
Sbjct: 108 YEDEDVLSSSDESSGRPIPRYVGRD 132
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 171 YEIKGVTKDNSGYKGEPVPQYVSKD 245
YE + V + G P+P+YV +D
Sbjct: 106 YEDEDVLSSSDESSGRPIPRYVGRD 130
>U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform b protein.
Length = 782
Score = 25.0 bits (52), Expect = 8.7
Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = +3
Query: 60 DGNLYFTIVTK--EDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY 233
D + YFT D+ + Y + NA + + + + + K S G+P P Y
Sbjct: 336 DESFYFTFSENCVRDLLIVTVYEMDSNNAEKKRILGCMTFPVSRILKKASQVVGDPFPHY 395
Query: 234 VSKDMM 251
+D M
Sbjct: 396 RRQDPM 401
>U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform a protein.
Length = 819
Score = 25.0 bits (52), Expect = 8.7
Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = +3
Query: 60 DGNLYFTIVTK--EDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY 233
D + YFT D+ + Y + NA + + + + + K S G+P P Y
Sbjct: 373 DESFYFTFSENCVRDLLIVTVYEMDSNNAEKKRILGCMTFPVSRILKKASQVVGDPFPHY 432
Query: 234 VSKDMM 251
+D M
Sbjct: 433 RRQDPM 438
>AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein.
Length = 819
Score = 25.0 bits (52), Expect = 8.7
Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = +3
Query: 60 DGNLYFTIVTK--EDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY 233
D + YFT D+ + Y + NA + + + + + K S G+P P Y
Sbjct: 373 DESFYFTFSENCVRDLLIVTVYEMDSNNAEKKRILGCMTFPVSRILKKASQVVGDPFPHY 432
Query: 234 VSKDMM 251
+D M
Sbjct: 433 RRQDPM 438
>AC024776-9|AAK68462.1| 244|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 23,
isoform a protein.
Length = 244
Score = 25.0 bits (52), Expect = 8.7
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 161 NYLFVDRCVLGGAYVFINVTDVFFSDDCEVEVSIRPSCDAAI-KVSHISV 15
NY +D + G + DVF +CE E S C I K+ + +V
Sbjct: 2 NYEKIDSTIPGPGISETDWNDVFEGCNCEAECSSAAGCSCLINKIDNYTV 51
>AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protein
protein.
Length = 782
Score = 25.0 bits (52), Expect = 8.7
Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = +3
Query: 60 DGNLYFTIVTK--EDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY 233
D + YFT D+ + Y + NA + + + + + K S G+P P Y
Sbjct: 336 DESFYFTFSENCVRDLLIVTVYEMDSNNAEKKRILGCMTFPVSRILKKASQVVGDPFPHY 395
Query: 234 VSKDMM 251
+D M
Sbjct: 396 RRQDPM 401
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,587,187
Number of Sequences: 27780
Number of extensions: 96066
Number of successful extensions: 312
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 312
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 270584450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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