Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S13A01NGRL0001_B17
         (319 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    25   0.29 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   0.89 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   2.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   4.7  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   4.7  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    20   8.3  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 24.6 bits (51), Expect = 0.29
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 188 QWTSLTLVTVNQSQPVPSSV 129
           QW  +T VTV + + VPSS+
Sbjct: 75  QWRGMTFVTVPRYKGVPSSL 94


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 224 EINGTLVLPSQV-QWTSLTLVTVNQSQPVPSSV 129
           E + T   P  V +W   T VT+ ++  VPSS+
Sbjct: 64  EFDHTKNYPFDVDRWRDKTFVTIERNNGVPSSL 96


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 188 QWTSLTLVTVNQSQPVPSSV 129
           +W   T VT+ ++  VPSS+
Sbjct: 72  RWNGKTFVTILRNDGVPSSL 91


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 99  GRLHRHIS*HHG 134
           G+LHRH+  H G
Sbjct: 161 GKLHRHMRIHTG 172


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 188 QWTSLTLVTVNQSQPVPSSV 129
           QW   T VT+ +   VPS++
Sbjct: 72  QWRDKTFVTILRYDGVPSTL 91


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 38  NFNIFDY*SNNY 3
           N+N ++Y +NNY
Sbjct: 100 NYNNYNYNNNNY 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,778
Number of Sequences: 438
Number of extensions: 1917
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)