Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S13A01NGRL0001_B12
         (483 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   1.4  
AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    24   3.1  
AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.    23   4.2  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   4.2  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 164 LGLVSHNPLHPA 129
           LGL SH+PLHP+
Sbjct: 575 LGLPSHHPLHPS 586


>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 113 MSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEF 214
           + ++MQ  A  C T  LE+ N E    A ++ ++
Sbjct: 262 LDQDMQDKARKCVTDVLERHNGELTYEAAMEMDY 295


>AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.
          Length = 140

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = +2

Query: 137 AVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIV--GRNFGSYVTHE 283
           A  C+    + F   + + A   +   KK  P W C+V    ++ +  TH+
Sbjct: 12  AASCSVGEAKTFTKCELVKAMYNRGISKKLLPDWACLVQWESSYSTTATHK 62


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 9/35 (25%), Positives = 20/35 (57%)
 Frame = -1

Query: 285 VSCVTYEPKLRPTMQCHVGLYFLSNSFLMKAAMSF 181
           +SC++Y+P++   MQ   G  F+  +  +   ++F
Sbjct: 605 LSCISYDPEVDQAMQFAFGHSFIVKNLEIANKITF 639


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 459,244
Number of Sequences: 2352
Number of extensions: 9119
Number of successful extensions: 64
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)