Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S13A01NGRL0001_B10
(462 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X98185-1|CAA66860.1| 123|Anopheles gambiae histone H2B protein. 26 0.74
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 26 0.74
AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase ... 25 1.7
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 24 2.3
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 24 3.0
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 23 3.9
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 23 3.9
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 23 6.9
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 22 9.1
AY748847-1|AAV28193.1| 104|Anopheles gambiae cytochrome P450 pr... 22 9.1
AF080565-1|AAC31945.1| 324|Anopheles gambiae Antennapedia homeo... 22 9.1
>X98185-1|CAA66860.1| 123|Anopheles gambiae histone H2B protein.
Length = 123
Score = 25.8 bits (54), Expect = 0.74
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 74 SKNDYSSQMENRKRTNPVFIIRRKKEV 154
SK+D + + RKR P++I + K+V
Sbjct: 21 SKSDKKKKRKTRKRATPIYIYKVLKQV 47
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 25.8 bits (54), Expect = 0.74
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 21 FSCFRNIKGAQQNCLFSLLKMTTQAKWK 104
+S FR+ +N L L+K T Q KWK
Sbjct: 304 YSTFRDEFKVARNALKRLIKHTRQRKWK 331
>AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase
protein.
Length = 808
Score = 24.6 bits (51), Expect = 1.7
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 281 RYLLELVEVI*CRFFCFYSLIFNDVFTPGINI 186
RY++ L+ + F + ++NDVF+ G+NI
Sbjct: 440 RYIILLMGI----FSMYTGFVYNDVFSKGMNI 467
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 24.2 bits (50), Expect = 2.3
Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Frame = -1
Query: 456 YPRLVVETQQHGV*HHLPHH----QPSGES*QHSQWHQP 352
+P L Q H HH HH QP+ + H H P
Sbjct: 125 HPHLPHVQQHHPSVHHPAHHPLHYQPAAAAAMHHHHHHP 163
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 23.8 bits (49), Expect = 3.0
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 53 TKLS--IFASKNDYSSQMENRKRTNPVFIIRRKKEVIQKF 166
TKL+ I S+NDY+ Q++ +K T F I ++ +Q F
Sbjct: 1120 TKLAEKISPSRNDYTVQLKYKKNTK-YFNINSEQIDVQNF 1158
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.4 bits (48), Expect = 3.9
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 157 TKVLIILHWIML 192
TK+L LHWI+L
Sbjct: 116 TKILYTLHWILL 127
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 23.4 bits (48), Expect = 3.9
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 366 QWHQPPS*LCRLGILILSLIALY 298
Q HQ P+ LG+L++ LY
Sbjct: 447 QHHQKPNACSNLGVLLIEFFELY 469
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 22.6 bits (46), Expect = 6.9
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +2
Query: 83 DYSSQMENRKRTN 121
++ SQM++RKRTN
Sbjct: 214 NHGSQMQSRKRTN 226
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 22.2 bits (45), Expect = 9.1
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 398 WWGRWCYTPCCWVSTT 445
W G+ CY PC S T
Sbjct: 1608 WRGKECYLPCPVQSVT 1623
>AY748847-1|AAV28193.1| 104|Anopheles gambiae cytochrome P450
protein.
Length = 104
Score = 22.2 bits (45), Expect = 9.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 237 KKPTLDDLNEFKKITLNADKNKELSEKVSIF 329
+ PT+ DLNE K + + L VS F
Sbjct: 74 RAPTMRDLNEMKLLERCLKETLRLYPSVSFF 104
>AF080565-1|AAC31945.1| 324|Anopheles gambiae Antennapedia homeotic
protein protein.
Length = 324
Score = 22.2 bits (45), Expect = 9.1
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -1
Query: 462 KCYPRLVVETQQHGV*HHLPHHQPSGES*QH-SQWHQPP 349
+CYP V +T QH + P G + Q + HQ P
Sbjct: 172 ECYPEQVHQTPQHMAMYTNAGGGPPGVTQQQPNMMHQQP 210
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 459,675
Number of Sequences: 2352
Number of extensions: 7843
Number of successful extensions: 26
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39969834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -