Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S13A01NGRL0001_B03
         (402 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    26   0.59 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   0.78 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   1.0  
L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    23   3.2  
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    23   3.2  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   3.2  
AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...    23   4.2  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           23   5.5  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    22   7.3  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    22   9.6  
DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        22   9.6  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    22   9.6  

>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.8 bits (54), Expect = 0.59
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -2

Query: 383 GFPERTTHPSLEPISSSARQHFIDADDM 300
           G P+ T HP L   S SA Q F   D M
Sbjct: 91  GLPDITRHPWLVTASQSALQKFASTDWM 118


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 25.4 bits (53), Expect = 0.78
 Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
 Frame = -1

Query: 294  GVVSSGC-GTDLYRSSLRGTCCNRYGLLPAPQNSAAR 187
            G    GC   D   S  +G+ CN+YG  P   N   R
Sbjct: 978  GFSEDGCHACDCDPSGSKGSQCNQYGQCPCNDNVEGR 1014


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 1.0
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 192 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLH 293
           +L+ E L  G   CN +  K CGK   HIR   H
Sbjct: 487 RLTFERLSGG---CNLHRCKLCGKVVTHIRNHYH 517


>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = -1

Query: 297 RGVVSSGCGTDLYRSSLRGTCCNRYGLLPAPQNSAARTHQTLSARI-VGSHPLSLSFCPS 121
           RG   S  G  +YR++  G      G+LP P+N++      ++  +   S  +S  F   
Sbjct: 177 RGFNVSVQGIIIYRAAYFGCFDTAKGMLPDPKNTSIFVSWAIAQVVTTASGIISYPFDTV 236

Query: 120 RKYGSLGQAHPDKTEI 73
           R+   + Q+ P K+E+
Sbjct: 237 RR-RMMMQSWPCKSEV 251


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = -1

Query: 297 RGVVSSGCGTDLYRSSLRGTCCNRYGLLPAPQNSAARTHQTLSARI-VGSHPLSLSFCPS 121
           RG   S  G  +YR++  G      G+LP P+N++      ++  +   S  +S  F   
Sbjct: 177 RGFNVSVQGIIIYRAAYFGCFDTAKGMLPDPKNTSIFVSWAIAQVVTTASGIISYPFDTV 236

Query: 120 RKYGSLGQAHPDKTEI 73
           R+   + Q+ P K+E+
Sbjct: 237 RR-RMMMQSWPCKSEV 251


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 60  YSYNIDNISLVGAPLC 13
           Y+Y +  + L G+PLC
Sbjct: 899 YAYQLHRMQLTGSPLC 914


>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
           protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 297 RGVVSSGCGTDLYRSSLRGTCCNRYGLLPAPQNSA 193
           RG   S  G  +YR++  G      G+LP P+N++
Sbjct: 177 RGFNVSVQGIIIYRAAYFGCFDTAKGMLPDPKNTS 211


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 141 TVDDFPLCVHLVSDEYEQL 197
           T +  P  +HL+ +EY++L
Sbjct: 84  TCETLPSEIHLIKEEYDEL 102


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 102  PKIRIFDLGKKRATVD 149
            P I +++  KKRAT+D
Sbjct: 1103 PDILVYEKRKKRATID 1118


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 373 NAPRIPVWSLSAPAHDNILLMRMTWKGCSL 284
           +A  + VW  +    DNI + R+T KG +L
Sbjct: 266 SADDMRVWLKAVLPTDNIDVYRLTKKGANL 295


>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 285 SSGCGTDLYRSSLRGTCCNRYGLLPAPQNS 196
           S+  G  + R   RG     Y +LP P N+
Sbjct: 239 SADLGAQILRLPYRGNKLAMYFILPNPDNT 268


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 91  VCLTQRSVFSTWAKRERQWMTSH 159
           +CLT+R +   +  R  +W   H
Sbjct: 317 LCLTERQIKIWFQNRRMKWKKEH 339


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,638
Number of Sequences: 2352
Number of extensions: 9394
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)