Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S13A01NGRL0001_B02
         (518 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   1.5  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.0  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    25   2.0  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   6.2  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +1

Query: 322 SKGFGFVCFSSPEEATKAVTE 384
           +KGF FV  +SPEEA K V E
Sbjct: 427 NKGF-FVQINSPEEAKKKVVE 446


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 52   AAERACM-ELNGKELVEGKPLYVGRAQKKAERQK 150
            A +RA M ELN K++++ K  Y G+  K   +Q+
Sbjct: 1156 ARDRANMPELNMKQILDYKAAYFGKLPKHQHQQQ 1189


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = +1

Query: 202 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCF-SSPEEATKAV 378
           Q ++L    LDD I    L+     FGT ++     ++G+     +  +   PE + + V
Sbjct: 19  QLISLIFVFLDDAIVANPLKNRCLQFGTTSTTNTQQQNGQEFVDDYDSYDDQPEPSDEPV 78

Query: 379 TEMNGRIVGT 408
            E N   V T
Sbjct: 79  FEKNVSTVAT 88


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 85  KELVEGKPLYVGRAQKKAERQKELKRKFEQLKSE 186
           KEL + +P Y    +K+ E  +EL  K EQ + E
Sbjct: 342 KELEQVRPRYEAMRRKEEECSRELNLK-EQKRKE 374


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,508
Number of Sequences: 2352
Number of extensions: 9500
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)