Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S13A01NGRL0001_B02
(518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 197 4e-51
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 197 4e-51
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 196 8e-51
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 196 8e-51
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 196 8e-51
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 194 2e-50
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 69 2e-12
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 67 6e-12
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 65 2e-11
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 65 2e-11
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 65 2e-11
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 65 2e-11
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 62 2e-10
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 62 2e-10
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 61 4e-10
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 61 4e-10
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 61 4e-10
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 61 4e-10
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 61 4e-10
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 60 1e-09
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 56 2e-08
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 54 5e-08
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 50 8e-07
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 49 2e-06
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 49 2e-06
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 49 2e-06
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 49 2e-06
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 49 2e-06
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 48 4e-06
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 48 4e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 47 7e-06
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 46 2e-05
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 46 2e-05
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 46 2e-05
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 46 2e-05
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 46 2e-05
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 46 2e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 45 3e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 44 5e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 42 2e-04
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 42 2e-04
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 42 2e-04
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 42 3e-04
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 42 3e-04
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 41 6e-04
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 41 6e-04
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 41 6e-04
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 41 6e-04
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 41 6e-04
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 41 6e-04
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 41 6e-04
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 41 6e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 40 8e-04
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 40 0.001
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 39 0.002
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 39 0.002
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 37 0.008
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 37 0.010
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 36 0.017
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 36 0.017
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 36 0.023
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 35 0.030
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 35 0.030
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 35 0.040
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 35 0.040
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 35 0.040
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 33 0.093
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 33 0.12
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 33 0.12
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 33 0.12
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 33 0.16
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 33 0.16
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.16
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 33 0.16
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 32 0.21
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 32 0.21
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 32 0.21
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 31 0.65
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 31 0.65
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 30 0.86
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 30 0.86
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 30 0.86
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 30 0.86
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 30 1.1
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 29 1.5
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 29 1.5
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical pr... 29 2.6
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 28 4.6
AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical ... 28 4.6
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical pr... 27 6.1
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 27 6.1
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 27 6.1
Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical pr... 27 8.0
U80842-5|AAK71419.2| 305|Caenorhabditis elegans Serpentine rece... 27 8.0
U61949-7|AAB03155.1| 510|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High inciden... 27 8.0
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 27 8.0
AC006625-10|AAK68271.1| 325|Caenorhabditis elegans Hypothetical... 27 8.0
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 197 bits (480), Expect = 4e-51
Identities = 99/152 (65%), Positives = 121/152 (79%), Gaps = 3/152 (1%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKP--LYVGRAQKKAERQKELKRKFEQLKSER 189
+GFGFVAF D DAA +A +LN ++EG L V RAQKK+ER ELKRK+E LK ER
Sbjct: 278 KGFGFVAFADQDAAGQAVEKLNDS-ILEGTDCKLSVCRAQKKSERSAELKRKYEALKQER 336
Query: 190 LTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEA 366
+ RYQGVNLYVKN+++ ++D+ LR F+ FGTITSAKVM+ E+GRSKGFGFVCF PEEA
Sbjct: 337 VQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEA 396
Query: 367 TKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 462
T AVT+MN +++G KPLYVALAQRKEDR+A L
Sbjct: 397 TAAVTDMNSKMIGAKPLYVALAQRKEDRRAQL 428
Score = 98.3 bits (234), Expect = 3e-21
Identities = 63/153 (41%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
S+G+GFV FE +A+ A ++NG L+ K +YVG+ Q +A+R KEL E
Sbjct: 184 SKGYGFVHFETEHSAQTAIEKVNGM-LLSDKKVYVGKFQPRAQRMKEL--------GESG 234
Query: 193 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEAT 369
+Y N++VKN + +D E+L F+ FG ITSA VM + G+ KGFGFV F+ + A
Sbjct: 235 LKY--TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAG 292
Query: 370 KAVTEMNGRIV-GTK-PLYVALAQRKEDRKAHL 462
+AV ++N I+ GT L V AQ+K +R A L
Sbjct: 293 QAVEKLNDSILEGTDCKLSVCRAQKKSERSAEL 325
Score = 74.1 bits (174), Expect = 5e-14
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
S G+ +V F+ P AERA +N E++ G+P+ + +Q+ +
Sbjct: 97 SLGYAYVNFQQPADAERALDTMNF-EVIHGRPMRIMWSQRDPAAR--------------- 140
Query: 193 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEAT 369
R N+++KNLD ID++ + F+ FG I S KV +D G SKG+GFV F + A
Sbjct: 141 -RAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQ 199
Query: 370 KAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 462
A+ ++NG ++ K +YV Q + R L
Sbjct: 200 TAIEKVNGMLLSDKKVYVGKFQPRAQRMKEL 230
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 174
S+GFGFV FE P+ A A ++N K ++ KPLYV AQ+K +R+ +L ++ Q
Sbjct: 382 SKGFGFVCFEKPEEATAAVTDMNSK-MIGAKPLYVALAQRKEDRRAQLASQYMQ 434
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 197 bits (480), Expect = 4e-51
Identities = 99/152 (65%), Positives = 121/152 (79%), Gaps = 3/152 (1%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKP--LYVGRAQKKAERQKELKRKFEQLKSER 189
+GFGFVAF D DAA +A +LN ++EG L V RAQKK+ER ELKRK+E LK ER
Sbjct: 278 KGFGFVAFADQDAAGQAVEKLNDS-ILEGTDCKLSVCRAQKKSERSAELKRKYEALKQER 336
Query: 190 LTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEA 366
+ RYQGVNLYVKN+++ ++D+ LR F+ FGTITSAKVM+ E+GRSKGFGFVCF PEEA
Sbjct: 337 VQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEA 396
Query: 367 TKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 462
T AVT+MN +++G KPLYVALAQRKEDR+A L
Sbjct: 397 TAAVTDMNSKMIGAKPLYVALAQRKEDRRAQL 428
Score = 98.3 bits (234), Expect = 3e-21
Identities = 63/153 (41%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
S+G+GFV FE +A+ A ++NG L+ K +YVG+ Q +A+R KEL E
Sbjct: 184 SKGYGFVHFETEHSAQTAIEKVNGM-LLSDKKVYVGKFQPRAQRMKEL--------GESG 234
Query: 193 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEAT 369
+Y N++VKN + +D E+L F+ FG ITSA VM + G+ KGFGFV F+ + A
Sbjct: 235 LKY--TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAG 292
Query: 370 KAVTEMNGRIV-GTK-PLYVALAQRKEDRKAHL 462
+AV ++N I+ GT L V AQ+K +R A L
Sbjct: 293 QAVEKLNDSILEGTDCKLSVCRAQKKSERSAEL 325
Score = 74.1 bits (174), Expect = 5e-14
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
S G+ +V F+ P AERA +N E++ G+P+ + +Q+ +
Sbjct: 97 SLGYAYVNFQQPADAERALDTMNF-EVIHGRPMRIMWSQRDPAAR--------------- 140
Query: 193 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEAT 369
R N+++KNLD ID++ + F+ FG I S KV +D G SKG+GFV F + A
Sbjct: 141 -RAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQ 199
Query: 370 KAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 462
A+ ++NG ++ K +YV Q + R L
Sbjct: 200 TAIEKVNGMLLSDKKVYVGKFQPRAQRMKEL 230
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 174
S+GFGFV FE P+ A A ++N K ++ KPLYV AQ+K +R+ +L ++ Q
Sbjct: 382 SKGFGFVCFEKPEEATAAVTDMNSK-MIGAKPLYVALAQRKEDRRAQLASQYMQ 434
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 196 bits (478), Expect = 8e-51
Identities = 98/153 (64%), Positives = 121/153 (79%), Gaps = 3/153 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLKSE 186
S+GFGFVAF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K+E
Sbjct: 191 SKGFGFVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHKAE 249
Query: 187 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEE 363
R+ +YQGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GRSKGFGFVCF PEE
Sbjct: 250 RMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEE 309
Query: 364 ATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 462
AT AVTEMN ++V +KPLYVA+AQRKEDR+A L
Sbjct: 310 ATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQL 342
Score = 91.1 bits (216), Expect = 4e-19
Identities = 68/169 (40%), Positives = 94/169 (55%), Gaps = 19/169 (11%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKK-AERQ--------KELKRK 165
S G+ +V F+ P AERA M+ E + GKP+ + +Q+ A R+ K L +
Sbjct: 72 SLGYAYVNFQQPADAERA-MDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKV 130
Query: 166 FE---QLKSERL-----TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGR 321
F Q +++R T Q N+YVKN D + E L K FA FG ITS +VM +G+
Sbjct: 131 FVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGK 190
Query: 322 SKGFGFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALAQRKEDRKAHL 462
SKGFGFV F++PEEA AV + + I GT L+V AQ+K +R A L
Sbjct: 191 SKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAEL 239
Score = 53.6 bits (123), Expect = 8e-08
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSER 189
S+GFGFV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S R
Sbjct: 296 SKGFGFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMR 354
Query: 190 L 192
+
Sbjct: 355 M 355
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 196 bits (478), Expect = 8e-51
Identities = 98/153 (64%), Positives = 121/153 (79%), Gaps = 3/153 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLKSE 186
S+GFGFVAF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K+E
Sbjct: 188 SKGFGFVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHKAE 246
Query: 187 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEE 363
R+ +YQGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GRSKGFGFVCF PEE
Sbjct: 247 RMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEE 306
Query: 364 ATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 462
AT AVTEMN ++V +KPLYVA+AQRKEDR+A L
Sbjct: 307 ATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQL 339
Score = 116 bits (278), Expect = 1e-26
Identities = 68/153 (44%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Frame = +1
Query: 10 YSRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 189
+S+G+GFV FE +AA+ A ++NG L+ GK ++VG+ Q +A+R +EL
Sbjct: 95 FSKGYGFVHFETEEAAQNAIQKVNGM-LLAGKKVFVGKFQPRAQRNRELGE--------- 144
Query: 190 LTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEAT 369
T Q N+YVKN D + E L K FA FG ITS +VM +G+SKGFGFV F++PEEA
Sbjct: 145 -TAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAE 203
Query: 370 KAVTEM-NGRIVGTK-PLYVALAQRKEDRKAHL 462
AV + + I GT L+V AQ+K +R A L
Sbjct: 204 TAVQALHDSTIEGTDLKLHVCRAQKKSERHAEL 236
Score = 69.7 bits (163), Expect = 1e-12
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +1
Query: 211 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEM 387
N+++KNLD ID++ + F+ FG I S KV + EDG SKG+GFV F + E A A+ ++
Sbjct: 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKV 117
Query: 388 NGRIVGTKPLYVALAQRKEDRKAHL 462
NG ++ K ++V Q + R L
Sbjct: 118 NGMLLAGKKVFVGKFQPRAQRNREL 142
Score = 53.6 bits (123), Expect = 8e-08
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSER 189
S+GFGFV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S R
Sbjct: 293 SKGFGFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMR 351
Query: 190 L 192
+
Sbjct: 352 M 352
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 196 bits (478), Expect = 8e-51
Identities = 98/153 (64%), Positives = 121/153 (79%), Gaps = 3/153 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLKSE 186
S+GFGFVAF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K+E
Sbjct: 251 SKGFGFVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHKAE 309
Query: 187 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEE 363
R+ +YQGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GRSKGFGFVCF PEE
Sbjct: 310 RMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEE 369
Query: 364 ATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 462
AT AVTEMN ++V +KPLYVA+AQRKEDR+A L
Sbjct: 370 ATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQL 402
Score = 116 bits (278), Expect = 1e-26
Identities = 68/153 (44%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Frame = +1
Query: 10 YSRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 189
+S+G+GFV FE +AA+ A ++NG L+ GK ++VG+ Q +A+R +EL
Sbjct: 158 FSKGYGFVHFETEEAAQNAIQKVNGM-LLAGKKVFVGKFQPRAQRNRELGE--------- 207
Query: 190 LTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEAT 369
T Q N+YVKN D + E L K FA FG ITS +VM +G+SKGFGFV F++PEEA
Sbjct: 208 -TAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAE 266
Query: 370 KAVTEM-NGRIVGTK-PLYVALAQRKEDRKAHL 462
AV + + I GT L+V AQ+K +R A L
Sbjct: 267 TAVQALHDSTIEGTDLKLHVCRAQKKSERHAEL 299
Score = 77.4 bits (182), Expect = 6e-15
Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
S G+ +V F+ P AERA M+ E + GKP+ + +Q+ +
Sbjct: 72 SLGYAYVNFQQPADAERA-MDTMNFEALHGKPMRIMWSQR----------------DPAM 114
Query: 193 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEAT 369
R N+++KNLD ID++ + F+ FG I S KV + EDG SKG+GFV F + E A
Sbjct: 115 RRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQ 174
Query: 370 KAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 462
A+ ++NG ++ K ++V Q + R L
Sbjct: 175 NAIQKVNGMLLAGKKVFVGKFQPRAQRNREL 205
Score = 53.6 bits (123), Expect = 8e-08
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSER 189
S+GFGFV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S R
Sbjct: 356 SKGFGFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMR 414
Query: 190 L 192
+
Sbjct: 415 M 415
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 194 bits (474), Expect = 2e-50
Identities = 97/153 (63%), Positives = 120/153 (78%), Gaps = 3/153 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLKSE 186
S+GFGFVAF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K+E
Sbjct: 251 SKGFGFVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHKAE 309
Query: 187 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEE 363
R+ +YQGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GRSKGFGFVCF PEE
Sbjct: 310 RMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEE 369
Query: 364 ATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 462
AT AVTEMN ++V +KPLYVA+ QRKEDR+A L
Sbjct: 370 ATSAVTEMNSKMVCSKPLYVAIGQRKEDRRAQL 402
Score = 116 bits (279), Expect = 1e-26
Identities = 68/153 (44%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Frame = +1
Query: 10 YSRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 189
+S+G+GFV FE +AA+ A ++NG L+ GK ++VG+ Q +A+R +EL
Sbjct: 158 FSKGYGFVHFETEEAAQNAIQKVNGM-LLAGKKVFVGKFQPRAQRNRELGE--------- 207
Query: 190 LTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEAT 369
T Q N+YVKN D + E L K FA FG ITS +VM +G+SKGFGFV F++PEEA
Sbjct: 208 -TAKQFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAE 266
Query: 370 KAVTEM-NGRIVGTK-PLYVALAQRKEDRKAHL 462
AV + + I GT L+V AQ+K +R A L
Sbjct: 267 TAVQALHDSTIEGTDLKLHVCRAQKKSERHAEL 299
Score = 77.4 bits (182), Expect = 6e-15
Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
S G+ +V F+ P AERA M+ E + GKP+ + +Q+ +
Sbjct: 72 SLGYAYVNFQQPADAERA-MDTMNFEALHGKPMRIMWSQR----------------DPAM 114
Query: 193 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEAT 369
R N+++KNLD ID++ + F+ FG I S KV + EDG SKG+GFV F + E A
Sbjct: 115 RRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQ 174
Query: 370 KAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 462
A+ ++NG ++ K ++V Q + R L
Sbjct: 175 NAIQKVNGMLLAGKKVFVGKFQPRAQRNREL 205
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 174
S+GFGFV FE P+ A A E+N K +V KPLYV Q+K +R+ +L ++ Q
Sbjct: 356 SKGFGFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIGQRKEDRRAQLASQYMQ 408
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 69.3 bits (162), Expect = 2e-12
Identities = 43/142 (30%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
Frame = +1
Query: 22 FGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRY 201
+ FV F D A +A +N K L+ + + V A + ++Q ++ TR+
Sbjct: 86 YAFVEFSDHGQASQALQTMN-KRLLLDREMKVNWAVEPGQQQSKIDT----------TRH 134
Query: 202 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKA 375
+++V +L +D+++LR+ F PFG ++ AKV+ + +SKG+GFV + EEA +A
Sbjct: 135 --FHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 192
Query: 376 VTEMNGRIVGTKPLYVALAQRK 441
+ +MNG+ +G + + A RK
Sbjct: 193 IEQMNGQWLGRRTIRTNWATRK 214
Score = 65.3 bits (152), Expect = 2e-11
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
S+G+GFV++ + AERA ++NG+ L + + A +K Q++ E+ E
Sbjct: 175 SKGYGFVSYPKREEAERAIEQMNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIY 233
Query: 193 TRYQGVN--LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEA 366
+ G N +YV N+ +DE +R+ FA FG IT ++ + +G+ FV F + + A
Sbjct: 234 NQTSGDNTSVYVGNIASLTEDE-IRQGFASFGRITEVRIF----KMQGYAFVKFDNKDAA 288
Query: 367 TKAVTEMNGRIVG 405
KA+ +MN + VG
Sbjct: 289 AKAIVQMNNQDVG 301
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 393
LYV NLD T+ ++ + F G++T KV+ DG + + FV FS +A++A+ MN
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIF-DGSNDPYAFVEFSDHGQASQALQTMNK 106
Query: 394 RIV 402
R++
Sbjct: 107 RLL 109
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 67.3 bits (157), Expect = 6e-12
Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 2/144 (1%)
Frame = +1
Query: 22 FGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRY 201
+ FV F D + A A NG+EL+E K ++V A + E + + K E +
Sbjct: 80 YAFVEFSDHNQATLALQSHNGRELLE-KEMHVTWAFEPREPGEN------RSKPETSRHF 132
Query: 202 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKA 375
+++V +L ID +LR+ F FG ++ AK++ ++ + KG+GFV + E+A +A
Sbjct: 133 ---HVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERA 189
Query: 376 VTEMNGRIVGTKPLYVALAQRKED 447
+ EMNG +G + + A RK D
Sbjct: 190 IDEMNGAWLGRRTIRTNWATRKPD 213
Score = 47.2 bits (107), Expect = 7e-06
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 393
L+V NLD I DE L F G + AK++ E G + + FV FS +AT A+ NG
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIFE-GLNDPYAFVEFSDHNQATLALQSHNG 100
Query: 394 RIVGTKPLYVALA 432
R + K ++V A
Sbjct: 101 RELLEKEMHVTWA 113
Score = 39.5 bits (88), Expect = 0.001
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 21/151 (13%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKEL---------VEGKPLYVG-RAQKKAERQ------ 147
+G+GFV++ + AERA E+NG L KP G R + +R+
Sbjct: 173 KGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPDEDGERGGDRGDRRGGGGGG 232
Query: 148 -----KELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 312
+ ++ ++++ ++ ++YV N+ + +DE +R+ F FG I +
Sbjct: 233 RDRYHNQSEKTYDEIFNQAAA--DNTSVYVGNIANLGEDE-IRRAFDRFGPINEVRTF-- 287
Query: 313 DGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 405
+ +G+ FV F + E A +A+ +MN +G
Sbjct: 288 --KIQGYAFVKFETKESAARAIVQMNNADIG 316
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 65.3 bits (152), Expect = 2e-11
Identities = 40/128 (31%), Positives = 68/128 (53%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
S+G+GFV+F + AE A +NGK + + A+K +E ++ K FEQ+ +
Sbjct: 175 SKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRD-KLTFEQVFNS-- 231
Query: 193 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATK 372
T+ ++YV N+ D LR F+ +G I ++ +++ + FV + E ATK
Sbjct: 232 TKADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIF----KTQRYAFVRYEKKECATK 287
Query: 373 AVTEMNGR 396
A+ EMNG+
Sbjct: 288 AIMEMNGK 295
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Frame = +1
Query: 187 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM--LEDGRSKGFGFVCFSSPE 360
R+ + +++V +L + +E L+ F FG ++ AKV+ ++ +SKG+GFV F + +
Sbjct: 128 RIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQ 187
Query: 361 EATKAVTEMNGRIVGTKPLYVALAQRK--EDRKAHLT 465
A A+ MNG+ +G + + A RK E+ + LT
Sbjct: 188 NAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLT 224
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 22 FGFVAFEDPDAAERACMELNGKEL 93
+ FV +E + A +A ME+NGKE+
Sbjct: 274 YAFVRYEKKECATKAIMEMNGKEM 297
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 65.3 bits (152), Expect = 2e-11
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
S+G+GFV++ + AERA ++NG+ L + + A +K Q++ E+ E
Sbjct: 62 SKGYGFVSYPKREEAERAIEQMNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIY 120
Query: 193 TRYQGVN--LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEA 366
+ G N +YV N+ +DE +R+ FA FG IT ++ + +G+ FV F + + A
Sbjct: 121 NQTSGDNTSVYVGNIASLTEDE-IRQGFASFGRITEVRIF----KMQGYAFVKFDNKDAA 175
Query: 367 TKAVTEMNGRIVG 405
KA+ +MN + VG
Sbjct: 176 AKAIVQMNNQDVG 188
Score = 64.5 bits (150), Expect = 4e-11
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = +1
Query: 211 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 384
+++V +L +D+++LR+ F PFG ++ AKV+ + +SKG+GFV + EEA +A+ +
Sbjct: 23 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 82
Query: 385 MNGRIVGTKPLYVALAQRK 441
MNG+ +G + + A RK
Sbjct: 83 MNGQWLGRRTIRTNWATRK 101
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 65.3 bits (152), Expect = 2e-11
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
S+G+GFV++ + AERA ++NG+ L + + A +K Q++ E+ E
Sbjct: 72 SKGYGFVSYPKREEAERAIEQMNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIY 130
Query: 193 TRYQGVN--LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEA 366
+ G N +YV N+ +DE +R+ FA FG IT ++ + +G+ FV F + + A
Sbjct: 131 NQTSGDNTSVYVGNIASLTEDE-IRQGFASFGRITEVRIF----KMQGYAFVKFDNKDAA 185
Query: 367 TKAVTEMNGRIVG 405
KA+ +MN + VG
Sbjct: 186 AKAIVQMNNQDVG 198
Score = 64.5 bits (150), Expect = 4e-11
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = +1
Query: 211 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 384
+++V +L +D+++LR+ F PFG ++ AKV+ + +SKG+GFV + EEA +A+ +
Sbjct: 33 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 92
Query: 385 MNGRIVGTKPLYVALAQRK 441
MNG+ +G + + A RK
Sbjct: 93 MNGQWLGRRTIRTNWATRK 111
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 65.3 bits (152), Expect = 2e-11
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
S+G+GFV++ + AERA ++NG+ L + + A +K Q++ E+ E
Sbjct: 143 SKGYGFVSYPKREEAERAIEQMNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIY 201
Query: 193 TRYQGVN--LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEA 366
+ G N +YV N+ +DE +R+ FA FG IT ++ + +G+ FV F + + A
Sbjct: 202 NQTSGDNTSVYVGNIASLTEDE-IRQGFASFGRITEVRIF----KMQGYAFVKFDNKDAA 256
Query: 367 TKAVTEMNGRIVG 405
KA+ +MN + VG
Sbjct: 257 AKAIVQMNNQDVG 269
Score = 64.5 bits (150), Expect = 4e-11
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = +1
Query: 211 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 384
+++V +L +D+++LR+ F PFG ++ AKV+ + +SKG+GFV + EEA +A+ +
Sbjct: 104 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 163
Query: 385 MNGRIVGTKPLYVALAQRK 441
MNG+ +G + + A RK
Sbjct: 164 MNGQWLGRRTIRTNWATRK 182
Score = 30.7 bits (66), Expect = 0.65
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 315
LYV NLD T+ ++ + F G++T KV+ ++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 62.1 bits (144), Expect = 2e-10
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLT 195
+GFGFV F + A+ A LN +L GKP+ V +A E+ ++
Sbjct: 54 QGFGFVEFMGEEDADYAIKILNMIKLY-GKPIKVNKASAH-EKNMDV------------- 98
Query: 196 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSA-KVM--LEDGRSKGFGFVCFSSPEEA 366
G N++V NLD +D++ L F+ FG I K+M ++ G SKGF F+ F+S E +
Sbjct: 99 ---GANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEAS 155
Query: 367 TKAVTEMNGRIVGTKPLYVALAQRKEDR 450
A+ MNG+ + + + V+ A +++ +
Sbjct: 156 DTALEAMNGQFLCNRAITVSYAFKRDSK 183
Score = 35.1 bits (77), Expect = 0.030
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +1
Query: 196 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEAT 369
R Q +YV LD+ + + L + G + S + + +GFGFV F E+A
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Query: 370 KAVTEMNGRIVGTKPLYVALAQRKE 444
A+ +N + KP+ V A E
Sbjct: 69 YAIKILNMIKLYGKPIKVNKASAHE 93
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 62.1 bits (144), Expect = 2e-10
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLT 195
+GFGFV F + A+ A LN +L GKP+ V +A E+ ++
Sbjct: 64 QGFGFVEFMGEEDADYAIKILNMIKLY-GKPIKVNKASAH-EKNMDV------------- 108
Query: 196 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSA-KVM--LEDGRSKGFGFVCFSSPEEA 366
G N++V NLD +D++ L F+ FG I K+M ++ G SKGF F+ F+S E +
Sbjct: 109 ---GANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEAS 165
Query: 367 TKAVTEMNGRIVGTKPLYVALAQRKEDR 450
A+ MNG+ + + + V+ A +++ +
Sbjct: 166 DTALEAMNGQFLCNRAITVSYAFKRDSK 193
Score = 35.1 bits (77), Expect = 0.030
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +1
Query: 196 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEAT 369
R Q +YV LD+ + + L + G + S + + +GFGFV F E+A
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Query: 370 KAVTEMNGRIVGTKPLYVALAQRKE 444
A+ +N + KP+ V A E
Sbjct: 79 YAIKILNMIKLYGKPIKVNKASAHE 103
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 61.3 bits (142), Expect = 4e-10
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 205 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 378
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 334 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 393
Query: 379 TEMNGRIVGTKPLYVAL 429
+ MNG +G+K L V L
Sbjct: 394 SAMNGFQIGSKRLKVQL 410
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 61.3 bits (142), Expect = 4e-10
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 205 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 378
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 379 TEMNGRIVGTKPLYVAL 429
+ MNG +G+K L V L
Sbjct: 558 SAMNGFQIGSKRLKVQL 574
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM- 387
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 388 -NGRIVG-TKPLYVALAQRKEDR 450
+ + G + PL V A ++D+
Sbjct: 204 HSQTMEGCSAPLVVKFADTQKDK 226
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 61.3 bits (142), Expect = 4e-10
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 205 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 378
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 379 TEMNGRIVGTKPLYVAL 429
+ MNG +G+K L V L
Sbjct: 558 SAMNGFQIGSKRLKVQL 574
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM- 387
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 388 -NGRIVG-TKPLYVALAQRKEDR 450
+ + G + PL V A ++D+
Sbjct: 204 HSQTMEGCSAPLVVKFADTQKDK 226
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 61.3 bits (142), Expect = 4e-10
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 205 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 378
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 427 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 486
Query: 379 TEMNGRIVGTKPLYVAL 429
+ MNG +G+K L V L
Sbjct: 487 SAMNGFQIGSKRLKVQL 503
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM- 387
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 388 -NGRIVG-TKPLYVALAQRKEDR 450
+ + G + PL V A ++D+
Sbjct: 204 HSQTMEGCSAPLVVKFADTQKDK 226
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 61.3 bits (142), Expect = 4e-10
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 205 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 378
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 379 TEMNGRIVGTKPLYVAL 429
+ MNG +G+K L V L
Sbjct: 558 SAMNGFQIGSKRLKVQL 574
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM- 387
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 388 -NGRIVG-TKPLYVALAQRKEDR 450
+ + G + PL V A ++D+
Sbjct: 204 HSQTMEGCSAPLVVKFADTQKDK 226
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 59.7 bits (138), Expect = 1e-09
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Frame = +1
Query: 124 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 303
A + A+ Q++ + + G NL++ +L D L + FAPFG I SAKV
Sbjct: 401 ALQLAQIQQQAAAALPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
Query: 304 MLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ-RKEDR 450
++ +SK FGFV + + + A+T MNG +G K L V L + R E R
Sbjct: 461 FVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRNESR 512
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 59.7 bits (138), Expect = 1e-09
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Frame = +1
Query: 124 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 303
A + A+ Q++ + + G NL++ +L D L + FAPFG I SAKV
Sbjct: 401 ALQLAQIQQQAAAALPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
Query: 304 MLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ-RKEDR 450
++ +SK FGFV + + + A+T MNG +G K L V L + R E R
Sbjct: 461 FVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRNESR 512
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 56.0 bits (129), Expect = 2e-08
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLT 195
RGF +V E+ A++A L + V+G+P+++ + +K + KF T
Sbjct: 632 RGFAYVVMENDQKAQQAL--LKDRVPVKGRPMFISAN----DPEKRVGFKFS-------T 678
Query: 196 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK-VMLEDGRSKGFGFVCFSSPEEATK 372
+ ++V+N+ D+ L+ F+ FGT+TS + V +DG+ KG FV F + A K
Sbjct: 679 TLEKSKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQK 738
Query: 373 AVTEMNGRIVGTKPLYVALA 432
V + ++ + L VAL+
Sbjct: 739 CVASGDKLMLRERELEVALS 758
Score = 32.3 bits (70), Expect = 0.21
Identities = 16/71 (22%), Positives = 38/71 (53%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 393
++V NLD T ++ +R+ +I A+ D +GF +V + ++A +A+ +
Sbjct: 595 IFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVHRGFAYVVMENDQKAQQALLKDRV 654
Query: 394 RIVGTKPLYVA 426
+ G +P++++
Sbjct: 655 PVKG-RPMFIS 664
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 54.4 bits (125), Expect = 5e-08
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEM 387
++ +L + + DE L K F + + AKV+ E +SKG+GFV F E+ +A+ EM
Sbjct: 205 VFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREM 264
Query: 388 NGRIVGTKPLYVALAQRKE 444
+G+ VG +P+ + + KE
Sbjct: 265 DGKYVGNRPIKLRKSAWKE 283
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLK 180
S+G+GFV+F D + RA E++GK V +P+ + ++ K +K+K +Q K
Sbjct: 243 SKGYGFVSFRDSEDYVRAMREMDGK-YVGNRPIKLRKSAWKERNIDVIKQKRKQKK 297
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 51.2 bits (117), Expect = 4e-07
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 2/131 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
S G+GFV + + A RA NG L + K +K + + ++++
Sbjct: 82 SLGYGFVNYVREEDALRAVSSFNGLRL----------------QNKTIKVSYARPSNDQI 125
Query: 193 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEA 366
+G NLYV + ++ L F PFG I +++++ ++ G SKG GFV F +EA
Sbjct: 126 ---KGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEA 182
Query: 367 TKAVTEMNGRI 399
A+ +NG I
Sbjct: 183 DVAIKTLNGSI 193
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +1
Query: 211 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTE 384
NL + L + E +R F G I S K++ + G+S G+GFV + E+A +AV+
Sbjct: 43 NLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSS 102
Query: 385 MNGRIVGTKPLYVALAQRKEDR 450
NG + K + V+ A+ D+
Sbjct: 103 FNGLRLQNKTIKVSYARPSNDQ 124
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 205 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVT 381
G L+V NL DD L + F+ FG I + K++ + + KG+ FV S+ EA A+
Sbjct: 373 GYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAML 432
Query: 382 EMNGRIVGTKPLYV 423
+NG + K L V
Sbjct: 433 SLNGTNLAGKTLQV 446
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 50.4 bits (115), Expect = 8e-07
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 193 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRS--KGFGFVCFSSPEEA 366
T NLY++ L +D+ LR+ + +G I S K +++ + KG+GFV F SP+ A
Sbjct: 76 TPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAA 135
Query: 367 TKAVTEMNGRIVGTKPLYVALAQRKED 447
AV +N G + L Q+++D
Sbjct: 136 AAAVDGLNTE--GVQAQMAKLQQQEQD 160
Score = 42.3 bits (95), Expect = 2e-04
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLT 195
+G+GFV FE P AA A LN EG + + Q++ +
Sbjct: 122 KGYGFVDFESPQAAAAAVDGLN----TEGVQAQMAKLQQQEQ------------------ 159
Query: 196 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM-LEDGRSKGFGFVCFSSPEEATK 372
NLY+ NL ++ L E FG + S +++ D +S+G GF S E+
Sbjct: 160 --DPTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEV 217
Query: 373 AVTEMNG 393
++ +NG
Sbjct: 218 IISALNG 224
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 193 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRS--KGFGFVCFSSPEEA 366
T NLY++ L +D+ LR+ + +G I S K +++ + KG+GFV F SP+ A
Sbjct: 102 TTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAA 161
Query: 367 TKAVTEMNGRIVGTKPLYVALAQRKED 447
AV +N G + L Q+++D
Sbjct: 162 AAAVDGLNTE--GVQAQMAKLQQQEQD 186
Score = 42.3 bits (95), Expect = 2e-04
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLT 195
+G+GFV FE P AA A LN EG + + Q++ +
Sbjct: 148 KGYGFVDFESPQAAAAAVDGLN----TEGVQAQMAKLQQQEQ------------------ 185
Query: 196 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM-LEDGRSKGFGFVCFSSPEEATK 372
NLY+ NL ++ L E FG + S +++ D +S+G GF S E+
Sbjct: 186 --DPTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEV 243
Query: 373 AVTEMNG 393
++ +NG
Sbjct: 244 IISALNG 250
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +1
Query: 133 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 312
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 313 D--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 423
G K F FV + PE A A MNG+++G + L V
Sbjct: 137 PATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
Score = 37.9 bits (84), Expect = 0.004
Identities = 30/130 (23%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Frame = +1
Query: 10 YSRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSE 186
+ + F FV +E P+AA A +NG +++ G+ L V + R + + + +
Sbjct: 141 HHKTFAFVEYEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMV 199
Query: 187 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRS-KGFGFVCFSSPE 360
+ + +YV ++ + + L+ F FG I ++ GR +GFG++ F++
Sbjct: 200 QKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLT 259
Query: 361 EATKAVTEMN 390
++A+ MN
Sbjct: 260 SQSEAIAGMN 269
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +1
Query: 133 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 312
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 313 D--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 423
G K F FV + PE A A MNG+++G + L V
Sbjct: 137 PATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
Score = 38.7 bits (86), Expect = 0.002
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Frame = +1
Query: 10 YSRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSE 186
+ + F FV +E P+AA A +NG +++ G+ L V + R + + + +
Sbjct: 141 HHKTFAFVEYEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMV 199
Query: 187 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRS-KGFGFVCFSSPE 360
+ + +YV ++ + + L+ F FG I ++ GR +GFG++ F++
Sbjct: 200 QKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLT 259
Query: 361 EATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 462
++A+ MN +G + L V D +L
Sbjct: 260 SQSEAIAGMNMFDLGGQYLRVGKCVTPPDALTYL 293
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +1
Query: 133 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 312
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 313 D--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 423
G K F FV + PE A A MNG+++G + L V
Sbjct: 137 PATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
Score = 38.7 bits (86), Expect = 0.002
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Frame = +1
Query: 10 YSRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSE 186
+ + F FV +E P+AA A +NG +++ G+ L V + R + + + +
Sbjct: 141 HHKTFAFVEYEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMV 199
Query: 187 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRS-KGFGFVCFSSPE 360
+ + +YV ++ + + L+ F FG I ++ GR +GFG++ F++
Sbjct: 200 QKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLT 259
Query: 361 EATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 462
++A+ MN +G + L V D +L
Sbjct: 260 SQSEAIAGMNMFDLGGQYLRVGKCVTPPDALTYL 293
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical protein
T23F6.4 protein.
Length = 872
Score = 48.8 bits (111), Expect = 2e-06
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
S GFGFV F A+ A ++ G EL++G L + + ++ + LKRK + K +
Sbjct: 688 SMGFGFVQFYTAFDAKTALKDMQG-ELLDGHSLELKISHRENADKGALKRKEVKQKEQG- 745
Query: 193 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRS---KGFGFVCFSSPEE 363
+ L V+NL + + F FG + + ++ + G+ +GFGFV F S +E
Sbjct: 746 ---ECTKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADE 802
Query: 364 ATKA 375
A +A
Sbjct: 803 AHRA 806
Score = 45.6 bits (103), Expect = 2e-05
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 390
L VKNL T +++LRK F +G I+ A + ++G+ +GF FV F A+ A+ + N
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAKSN 64
Query: 391 GRIVGTKPLYV 423
+K L V
Sbjct: 65 QTFFNSKKLTV 75
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 387
L+++NL ++ L+ F +G ++ +V+++ G KGF V F PE A A + +
Sbjct: 281 LFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSAL 340
Query: 388 NGRIVGTKPLYVALAQRKEDRK 453
+G + + +++ K ++
Sbjct: 341 DGYVFKGRMMHILPGDEKRTKE 362
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 393
L+V N+ D L+ F FG ++ +++ + SKGFGFV P++A +A E++G
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHG 214
Query: 394 RIVGTKPLYVALAQRKEDRK 453
++ + + V A + K
Sbjct: 215 SMIEGRKIEVNCATARVHSK 234
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQK 150
S+GFGFV E P AERA EL+G ++EG+ + V A + +K
Sbjct: 191 SKGFGFVTMERPQDAERARQELHG-SMIEGRKIEVNCATARVHSKK 235
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 393
L+V N+ D L+ F FG ++ +++ + SKGFGFV P++A +A E++G
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHG 214
Query: 394 RIVGTKPLYVALAQRKEDRK 453
++ + + V A + K
Sbjct: 215 SMIEGRKIEVNCATARVHSK 234
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQK 150
S+GFGFV E P AERA EL+G ++EG+ + V A + +K
Sbjct: 191 SKGFGFVTMERPQDAERARQELHG-SMIEGRKIEVNCATARVHSKK 235
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 393
L+V N+ + L F G + +++ + SKGFGFV +P++A +A E NG
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNG 161
Query: 394 RIVGTKPLYVALA-QRKEDRKA 456
+ + + V LA QR ++KA
Sbjct: 162 TTIEGRRVEVNLATQRVHNKKA 183
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQK 150
S+GFGFV ++PD A+RA E NG +EG+ + V A ++ +K
Sbjct: 138 SKGFGFVTMQNPDDADRARAEFNG-TTIEGRRVEVNLATQRVHNKK 182
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 393
L+V N+ + L F G + +++ + SKGFGFV +P++A +A E NG
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNG 161
Query: 394 RIVGTKPLYVALA-QRKEDRKA 456
+ + + V LA QR ++KA
Sbjct: 162 TTIEGRRVEVNLATQRVHNKKA 183
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQK 150
S+GFGFV ++PD A+RA E NG +EG+ + V A ++ +K
Sbjct: 138 SKGFGFVTMQNPDDADRARAEFNG-TTIEGRRVEVNLATQRVHNKK 182
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 47.2 bits (107), Expect = 7e-06
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 211 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTE 384
++YV N +E L F+ G I + +++ E GR +GF F+ F+ A +AV +
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 385 MNGRIVGTKPLYVALAQR 438
MNG +PL V LA +
Sbjct: 66 MNGAEFNGRPLRVNLANK 83
Score = 36.3 bits (80), Expect = 0.013
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQK 132
RGF F+ F + +A+RA ++NG E G+PL V A K
Sbjct: 46 RGFAFIEFAEEGSAQRAVEQMNGAEF-NGRPLRVNLANK 83
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 46.0 bits (104), Expect = 2e-05
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
SRGFGFV F + A + +++GK + K+A + + R + ++RL
Sbjct: 63 SRGFGFVTFSGKTEVDAAMKQR--PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL 116
Query: 193 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEA 366
YV + + ++ L + F +GT+T ++++L+ K GFGFV F +
Sbjct: 117 --------YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSV 168
Query: 367 TKAVTEMNGRIVG 405
+ V + + + G
Sbjct: 169 DQCVLQKSHMVNG 181
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 384
++V L D+ +R+ ++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 46.0 bits (104), Expect = 2e-05
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
SRGFGFV F + A + +++GK + K+A + + R + ++RL
Sbjct: 25 SRGFGFVTFSGKTEVDAAMKQR--PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL 78
Query: 193 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEA 366
YV + + ++ L + F +GT+T ++++L+ K GFGFV F +
Sbjct: 79 --------YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSV 130
Query: 367 TKAVTEMNGRIVG 405
+ V + + + G
Sbjct: 131 DQCVLQKSHMVNG 143
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 256 LRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 384
+R+ ++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 45
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 46.0 bits (104), Expect = 2e-05
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
SRGFGFV F + A + +++GK + K+A + + R + ++RL
Sbjct: 25 SRGFGFVTFSGKTEVDAAMKQR--PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL 78
Query: 193 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEA 366
YV + + ++ L + F +GT+T ++++L+ K GFGFV F +
Sbjct: 79 --------YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSV 130
Query: 367 TKAVTEMNGRIVG 405
+ V + + + G
Sbjct: 131 DQCVLQKSHMVNG 143
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 256 LRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 384
+R+ ++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 45
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 46.0 bits (104), Expect = 2e-05
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
SRGFGFV F + A + +++GK + K+A + + R + ++RL
Sbjct: 63 SRGFGFVTFSGKTEVDAAMKQR--PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL 116
Query: 193 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEA 366
YV + + ++ L + F +GT+T ++++L+ K GFGFV F +
Sbjct: 117 --------YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSV 168
Query: 367 TKAVTEMNGRIVG 405
+ V + + + G
Sbjct: 169 DQCVLQKSHMVNG 181
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 384
++V L D+ +R+ ++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 46.0 bits (104), Expect = 2e-05
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
SRGFGFV F + A + +++GK + K+A + + R + ++RL
Sbjct: 63 SRGFGFVTFSGKTEVDAAMKQR--PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL 116
Query: 193 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEA 366
YV + + ++ L + F +GT+T ++++L+ K GFGFV F +
Sbjct: 117 --------YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSV 168
Query: 367 TKAVTEMNGRIVG 405
+ V + + + G
Sbjct: 169 DQCVLQKSHMVNG 181
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 384
++V L D+ +R+ ++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 45.6 bits (103), Expect = 2e-05
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKEL-VEGKPLYVGRAQKKAERQKELKRKFEQLKSER 189
+RGFGF+ F DP + ++ LN +E ++GK + K K + K
Sbjct: 85 ARGFGFITFVDPSSVDKV---LNNREHELDGKKI-----DPKVAFPKRTQAKL------- 129
Query: 190 LTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEE 363
+T+ + V ++ L T E +++ F +G + A +M + R +GFGFV F S E
Sbjct: 130 VTKTKKV--FIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEV 187
Query: 364 ATKAVTEMNGRIVGTKPLYVALAQRKE 444
A K V E++ + K + AQ KE
Sbjct: 188 ADK-VCEIHFHEINGKMVECKKAQPKE 213
Score = 36.3 bits (80), Expect = 0.013
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 387
+++ L E LR F FG + VM + R++GFGF+ F P K +
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 388 NGRIVGTK 411
+ G K
Sbjct: 107 EHELDGKK 114
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 45.6 bits (103), Expect = 2e-05
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKEL-VEGKPLYVGRAQKKAERQKELKRKFEQLKSER 189
+RGFGF+ F DP + ++ LN +E ++GK + K K + K
Sbjct: 85 ARGFGFITFVDPSSVDKV---LNNREHELDGKKI-----DPKVAFPKRTQAKL------- 129
Query: 190 LTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEE 363
+T+ + V ++ L T E +++ F +G + A +M + R +GFGFV F S E
Sbjct: 130 VTKTKKV--FIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEV 187
Query: 364 ATKAVTEMNGRIVGTKPLYVALAQRKE 444
A K V E++ + K + AQ KE
Sbjct: 188 ADK-VCEIHFHEINGKMVECKKAQPKE 213
Score = 36.3 bits (80), Expect = 0.013
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 387
+++ L E LR F FG + VM + R++GFGF+ F P K +
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 388 NGRIVGTK 411
+ G K
Sbjct: 107 EHELDGKK 114
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEM 387
LYV + + ++ L F PFG + + + + E G+ +GFGFV F E+A A+ M
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 388 NGRIVGTKPLYVALAQ 435
N + K + V A+
Sbjct: 73 NESELFGKTIRVNFAR 88
Score = 29.1 bits (62), Expect = 2.0
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYV--GRAQKKAER-QKELKRKFEQLK 180
RGFGFV F+ + A A +N EL GK + V R K ER QK + E LK
Sbjct: 52 RGFGFVEFDMAEDAAMAIDNMNESELF-GKTIRVNFARPPKATERSQKPVWADDEWLK 108
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +1
Query: 202 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKA 375
QG ++YV N+ +E + FA G + + +++ E GR +GF FV FS A +A
Sbjct: 4 QGFSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRA 63
Query: 376 VTEMNGRIVGTKPLYVALAQR 438
V ++NG + L V A +
Sbjct: 64 VEQLNGVAFNGRNLRVNYANK 84
Score = 30.7 bits (66), Expect = 0.65
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQK 132
RGF FV F + A+RA +LNG G+ L V A K
Sbjct: 47 RGFAFVEFSEEAGAQRAVEQLNGVAF-NGRNLRVNYANK 84
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 44.4 bits (100), Expect = 5e-05
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 268 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA-QRKE 444
F G + +++ + SKGFGFV +P++A +A E NG + + + V LA QR
Sbjct: 2 FEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVH 61
Query: 445 DRKA 456
++KA
Sbjct: 62 NKKA 65
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQK 150
S+GFGFV ++PD A+RA E NG +EG+ + V A ++ +K
Sbjct: 20 SKGFGFVTMQNPDDADRARAEFNG-TTIEGRRVEVNLATQRVHNKK 64
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 44.0 bits (99), Expect = 7e-05
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +1
Query: 205 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAV 378
G ++YV N ++ L F+ G +++ +++ E GR +GF FV F+ A +AV
Sbjct: 3 GFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAV 62
Query: 379 TEMNGRIVGTKPLYVALAQRKED 447
+ NG + L V LAQ + +
Sbjct: 63 DQFNGVDFNGRALRVNLAQNRNN 85
Score = 32.3 bits (70), Expect = 0.21
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKK 135
RGF FV F + AA+RA + NG + G+ L V AQ +
Sbjct: 45 RGFAFVEFTEEAAAQRAVDQFNGVDF-NGRALRVNLAQNR 83
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Frame = +1
Query: 139 ERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--E 312
E K+ K QLK++ +G ++++NL +E +++E + FG I A + +
Sbjct: 241 EPAKKPKNPKAQLKTDESIT-EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKD 299
Query: 313 DGRSKGFGFVCFSSPEEATKAVTEM-NGRIVGTKPLYVALA-QRKE 444
G SKG FV FS+P EA+ + + +G I+ + + LA RKE
Sbjct: 300 SGHSKGTAFVHFSTPIEASNCIEGVEDGVIIDNRLVKANLAIPRKE 345
Score = 31.1 bits (67), Expect = 0.49
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Frame = +1
Query: 133 KAERQKELKRKFEQLKSERLTRY-QGVNLYVKNLDDTIDDERLR----KEFAPFGTITSA 297
K ER E RK K E + V L + NL I+D +L+ K +P IT
Sbjct: 389 KRERIAEAMRK----KLENTNMFISPVRLCIHNLPQKINDVKLKELAQKFTSPGALITEC 444
Query: 298 KVMLE------DGRSK--GFGFVCFSSPEEATKAVTEMN 390
+V ++ DG+ K GFGFV F A + + ++N
Sbjct: 445 RVWMDKKRLTPDGKPKSSGFGFVAFKEHMHALECLKKLN 483
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 42.3 bits (95), Expect = 2e-04
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 2/140 (1%)
Frame = +1
Query: 10 YSRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 189
+SRGFGFV F +AE A + K + GK + RA + + + F +
Sbjct: 88 HSRGFGFVTFASIFSAESAMNDRPHK--LGGKTVDSKRAIPREQMSSMIPPPFFETDPA- 144
Query: 190 LTRYQGVNLYVKNLDDTIDD-ERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEA 366
G L + + + + + LR F FGT+ +++ G+ +G GFV + E A
Sbjct: 145 ----PGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEIL---GQPRGLGFVIYEDKESA 197
Query: 367 TKAVTEMNGR-IVGTKPLYV 423
+ + +GR IV + + V
Sbjct: 198 DRCLAHNSGRHIVNERKIEV 217
Score = 33.5 bits (73), Expect = 0.093
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 189
RG GFV +ED ++A+R +G+ +V + + V K KR Q S+R
Sbjct: 184 RGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHPNGSTYWKRPQSQSHSQR 241
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 42.3 bits (95), Expect = 2e-04
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 2/140 (1%)
Frame = +1
Query: 10 YSRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 189
+SRGFGFV F +AE A + K + GK + RA + + + F +
Sbjct: 108 HSRGFGFVTFASIFSAESAMNDRPHK--LGGKTVDSKRAIPREQMSSMIPPPFFETDPA- 164
Query: 190 LTRYQGVNLYVKNLDDTIDD-ERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEA 366
G L + + + + + LR F FGT+ +++ G+ +G GFV + E A
Sbjct: 165 ----PGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEIL---GQPRGLGFVIYEDKESA 217
Query: 367 TKAVTEMNGR-IVGTKPLYV 423
+ + +GR IV + + V
Sbjct: 218 DRCLAHNSGRHIVNERKIEV 237
Score = 33.5 bits (73), Expect = 0.093
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 189
RG GFV +ED ++A+R +G+ +V + + V K KR Q S+R
Sbjct: 204 RGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHPNGSTYWKRPQSQSHSQR 261
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 42.3 bits (95), Expect = 2e-04
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 2/140 (1%)
Frame = +1
Query: 10 YSRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 189
+SRGFGFV F +AE A + K + GK + RA + + + F +
Sbjct: 109 HSRGFGFVTFASIFSAESAMNDRPHK--LGGKTVDSKRAIPREQMSSMIPPPFFETDPA- 165
Query: 190 LTRYQGVNLYVKNLDDTIDD-ERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEA 366
G L + + + + + LR F FGT+ +++ G+ +G GFV + E A
Sbjct: 166 ----PGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEIL---GQPRGLGFVIYEDKESA 218
Query: 367 TKAVTEMNGR-IVGTKPLYV 423
+ + +GR IV + + V
Sbjct: 219 DRCLAHNSGRHIVNERKIEV 238
Score = 33.5 bits (73), Expect = 0.093
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 189
RG GFV +ED ++A+R +G+ +V + + V K KR Q S+R
Sbjct: 205 RGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHPNGSTYWKRPQSQSHSQR 262
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 211 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVM-LEDGRSKGFGFVCFSSPEEATKAVTEM 387
NL+V ++ D + D L + F + + AK+ DG SKG GFV F + + A+ EM
Sbjct: 157 NLHVSSVPDDMADAELYRIFDKYQSCRGAKMFRFVDGSSKGSGFVRFGNQTDQQMALVEM 216
Query: 388 NGRIVGTKPLYVALAQRKEDR 450
+ VG + + LA + +R
Sbjct: 217 HRTKVGGCRIILKLAGSRGER 237
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM- 387
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 388 -NGRIVG-TKPLYVALAQRKEDR 450
+ + G + PL V A ++D+
Sbjct: 204 HSQTMEGCSAPLVVKFADTQKDK 226
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 41.5 bits (93), Expect = 3e-04
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 202 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAV 378
Q V+L V +D DE +K F GT+ ++ + DG SKGFGFV SS E K +
Sbjct: 171 QPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSSVGEQNKVL 230
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 40.7 bits (91), Expect = 6e-04
Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLT 195
+ F F+ F D A M +G + G+ L V R + Q ++ +
Sbjct: 230 KNFAFIEFRSIDETT-AGMAFDGINFM-GQQLKVRRPRDYQPSQNTFDMN-SRMPVSTIV 286
Query: 196 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATK 372
+++ L + + ++++++ FG + + + ++ G SKG+ F + P +
Sbjct: 287 VDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQ 346
Query: 373 AVTEMNGRIVGTKPLYVALAQRKEDR 450
A+ +NG +G K L V LA + R
Sbjct: 347 AIAGLNGMQLGDKQLVVQLACANQQR 372
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKA 375
+YV N+ + ++ L F +G + S +++ D SKGFGFV S E KA
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKA 106
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 387
++V + +++E L F +G + A+V + +GRS+GF FV F++ E A+
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 388 NGRIVGTKPLYVALAQRKEDRK 453
I G K + V A+ +E++K
Sbjct: 91 EQTIKG-KSVEVKPAKSRENKK 111
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 387
++V + +++E L F +G + A+V + +GRS+GF FV F++ E A+
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 388 NGRIVGTKPLYVALAQRKEDRK 453
I G K + V A+ +E++K
Sbjct: 91 EQTIKG-KSVEVKPAKSRENKK 111
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 40.7 bits (91), Expect = 6e-04
Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLT 195
+ F F+ F D A M +G + G+ L V R + Q ++ +
Sbjct: 230 KNFAFIEFRSIDETT-AGMAFDGINFM-GQQLKVRRPRDYQPSQNTFDMN-SRMPVSTIV 286
Query: 196 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATK 372
+++ L + + ++++++ FG + + + ++ G SKG+ F + P +
Sbjct: 287 VDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQ 346
Query: 373 AVTEMNGRIVGTKPLYVALAQRKEDR 450
A+ +NG +G K L V LA + R
Sbjct: 347 AIAGLNGMQLGDKQLVVQLACANQQR 372
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 40.7 bits (91), Expect = 6e-04
Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLT 195
+ F F+ F D A M +G + G+ L V R + Q ++ +
Sbjct: 205 KNFAFIEFRSIDETT-AGMAFDGINFM-GQQLKVRRPRDYQPSQNTFDMN-SRMPVSTIV 261
Query: 196 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATK 372
+++ L + + ++++++ FG + + + ++ G SKG+ F + P +
Sbjct: 262 VDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQ 321
Query: 373 AVTEMNGRIVGTKPLYVALAQRKEDR 450
A+ +NG +G K L V LA + R
Sbjct: 322 AIAGLNGMQLGDKQLVVQLACANQQR 347
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 40.7 bits (91), Expect = 6e-04
Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLT 195
+ F F+ F D A M +G + G+ L V R + Q ++ +
Sbjct: 208 KNFAFIEFRSIDETT-AGMAFDGINFM-GQQLKVRRPRDYQPSQNTFDMN-SRMPVSTIV 264
Query: 196 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATK 372
+++ L + + ++++++ FG + + + ++ G SKG+ F + P +
Sbjct: 265 VDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQ 324
Query: 373 AVTEMNGRIVGTKPLYVALAQRKEDR 450
A+ +NG +G K L V LA + R
Sbjct: 325 AIAGLNGMQLGDKQLVVQLACANQQR 350
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKA 375
+YV N+ + ++ L F +G + S +++ D SKGFGFV S E KA
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKA 106
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 40.3 bits (90), Expect = 8e-04
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMN 390
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM+
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +1
Query: 211 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTE 384
+++V N+ + ++ +R F+ G + S K++ E G+ KG+GF+ F + A A+
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 385 MNG 393
+NG
Sbjct: 79 LNG 81
Score = 30.7 bits (66), Expect = 0.65
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRA 126
+G+GF+ F D AE A LNG EL G+ L V A
Sbjct: 59 KGYGFIEFPDIQTAEVAIRNLNGYEL-SGRILRVDSA 94
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 211 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTE 384
+L + NL LR+ F +G I + + +SKGFGFV F +A A+
Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79
Query: 385 MNGRIVGTKPLYVALAQ 435
+G++V + L V LA+
Sbjct: 80 TDGKLVDGRELRVTLAK 96
Score = 30.7 bits (66), Expect = 0.65
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQ 129
S+GFGFV F + AE A +GK LV+G+ L V A+
Sbjct: 59 SKGFGFVRFYERRDAEHALDRTDGK-LVDGRELRVTLAK 96
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 211 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTE 384
+L + NL LR+ F +G I + + +SKGFGFV F +A A+
Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79
Query: 385 MNGRIVGTKPLYVALAQ 435
+G++V + L V LA+
Sbjct: 80 TDGKLVDGRELRVTLAK 96
Score = 30.7 bits (66), Expect = 0.65
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQ 129
S+GFGFV F + AE A +GK LV+G+ L V A+
Sbjct: 59 SKGFGFVRFYERRDAEHALDRTDGK-LVDGRELRVTLAK 96
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 220 VKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMN 390
V NL ++++ LR F G + + + G KGF FV F S ++A +A+ E+N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELN 81
+GF FV FE D A RA ELN
Sbjct: 217 KGFAFVTFESRDDAARAIAELN 238
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 37.1 bits (82), Expect = 0.008
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKA 375
L V NL ++ LR F FG I ++ + G S+GFGF+ F+ E+AT A
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 36.7 bits (81), Expect = 0.010
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMN 390
+++ NL + ++L + F G IT ++ +G+SKG + ++ P EA +AV+ +N
Sbjct: 190 IFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAVSMLN 249
Query: 391 GRIVGTKPLYVAL 429
G+ + + L V +
Sbjct: 250 GQRLFDRNLVVKM 262
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 35.9 bits (79), Expect = 0.017
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 205 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFG 336
G NL++ +L D L FAPFG I SAKV ++ SK FG
Sbjct: 75 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFG 120
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 35.9 bits (79), Expect = 0.017
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +1
Query: 211 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 390
N++V+ + + D L + FG IT V + G+GFV F + A K + EM+
Sbjct: 97 NVFVRGISRDMPDTEL---YQAFGGITDGVVQCHV--ADGYGFVLFDTRANAQKKIVEMD 151
Query: 391 GRIVGTKPLYVALAQ 435
G+ + K + V+ A+
Sbjct: 152 GKTLNGKLISVSWAR 166
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 19 GFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 174
G+GFV F+ A++ +E++GK L GK + V A+ +K + E+
Sbjct: 131 GYGFVLFDTRANAQKKIVEMDGKTL-NGKLISVSWARPDTVGRKRKRPMSEE 181
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 35.5 bits (78), Expect = 0.023
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +1
Query: 139 ERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED- 315
ER+ L + KS T +Y+ L + + + F+ +G + + ++ +
Sbjct: 15 ERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKD 74
Query: 316 -GRSKGFGFVCFSSPEEATKAVTEMNG 393
G+SKGF F+C+ AV NG
Sbjct: 75 TGKSKGFAFLCYKDQRSTILAVDNFNG 101
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 35.1 bits (77), Expect = 0.030
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEA 366
++V + + LR+ F F + K++ DG+SKG+GF+ F + ++A
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 119
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKEL-VEGKPLYVGRAQKK 135
S+G+GF+ FE D AE +L K+L + L +G A +K
Sbjct: 105 SKGYGFITFETEDQAEE-IRKLTPKQLEFRSRKLNLGPAIRK 145
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 35.1 bits (77), Expect = 0.030
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEA 366
++V + + LR+ F F + K++ DG+SKG+GF+ F + ++A
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 120
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKEL-VEGKPLYVGRAQKK 135
S+G+GF+ FE D AE +L K+L + L +G A +K
Sbjct: 106 SKGYGFITFETEDQAEE-IRKLTPKQLEFRSRKLNLGPAIRK 146
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 34.7 bits (76), Expect = 0.040
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 19 GFGFVAFEDPDAAERACMELNGKEL 93
GFGFV F+D AE A +LNGKEL
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKEL 61
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 393
+Y+ L + ++ + F +G I V+L++G FGFV F +A AV ++NG
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKNG----FGFVEFDDKRDAEDAVHDLNG 58
Query: 394 RIVG 405
+ +G
Sbjct: 59 KELG 62
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 34.7 bits (76), Expect = 0.040
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 19 GFGFVAFEDPDAAERACMELNGKEL 93
GFGFV F+D AE A +LNGKEL
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKEL 61
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 393
+Y+ L + ++ + F +G I V+L++G FGFV F +A AV ++NG
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKNG----FGFVEFDDKRDAEDAVHDLNG 58
Query: 394 RIVG 405
+ +G
Sbjct: 59 KELG 62
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 34.7 bits (76), Expect = 0.040
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 19 GFGFVAFEDPDAAERACMELNGKEL 93
GFGFV F+D AE A +LNGKEL
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKEL 61
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 393
+Y+ L + ++ + F +G I V+L++G FGFV F +A AV ++NG
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKNG----FGFVEFDDKRDAEDAVHDLNG 58
Query: 394 RIVG 405
+ +G
Sbjct: 59 KELG 62
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 33.5 bits (73), Expect = 0.093
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 310 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 444
+ G KGF +V F + ++ A++ +NG G + L V AQ+++
Sbjct: 48 DSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQRD 92
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 33.1 bits (72), Expect = 0.12
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 19 GFGFVAFEDPDAAERACMELNGKEL 93
GFGFV F+D A+ A +LNGKEL
Sbjct: 36 GFGFVDFQDQRDADDAVHDLNGKEL 60
Score = 31.9 bits (69), Expect = 0.28
Identities = 20/78 (25%), Positives = 40/78 (51%)
Frame = +1
Query: 208 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM 387
V +Y+ L + D + F +G ++ V++++G FGFV F +A AV ++
Sbjct: 2 VRVYIGRLPNRASDRDVEHFFRGYGKLSD--VIMKNG----FGFVDFQDQRDADDAVHDL 55
Query: 388 NGRIVGTKPLYVALAQRK 441
NG+ + + + + +RK
Sbjct: 56 NGKELCGERVILEFPRRK 73
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 387
++V L D+ L + F FG I A V+ + +S+G+GFV A +A +
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDP 96
Query: 388 NGRIVGTK 411
N I G K
Sbjct: 97 NPIIDGRK 104
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRA 126
SRG+GFV +D +AERAC + N +++G+ V A
Sbjct: 75 SRGYGFVTMKDRASAERACKDPN--PIIDGRKANVNLA 110
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 393
LY+KNL I E + + F FG + +V ++G FV + +A A ++G
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVG-NTAETRGTAFVVYEDIFDAKTACEHLSG 79
Query: 394 RIVGTKPLYVALAQ 435
V + L V Q
Sbjct: 80 YNVSNRYLVVLYYQ 93
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 32.7 bits (71), Expect = 0.16
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKE----FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 381
LY+ NL++ I + LRK F FG I S + + +G V F A+ A
Sbjct: 10 LYINNLNEKIKIDELRKSLVAVFKQFGEIVSV-MCFRTLKMRGQAHVIFKELPAASAARE 68
Query: 382 EMNGRIVGTKPLYVALAQRKED 447
+NG KP+ + A+ D
Sbjct: 69 ALNGFPFYEKPMRIQFAREDSD 90
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 32.7 bits (71), Expect = 0.16
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 393
L+V NL + + + L++ F+P G I + KGF F+ + A A ++G
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLS-----GKGFAFLRLDTRAHAESAKEAIDG 172
Query: 394 RIVGTKPLYVALA 432
RI+ + + V A
Sbjct: 173 RIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.7 bits (71), Expect = 0.16
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 393
L+V NL + + + L++ F+P G I + KGF F+ + A A ++G
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLS-----GKGFAFLRLDTRAHAESAKEAIDG 172
Query: 394 RIVGTKPLYVALA 432
RI+ + + V A
Sbjct: 173 RIIHGRQVRVRFA 185
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 32.7 bits (71), Expect = 0.16
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 17/108 (15%)
Frame = +1
Query: 121 RAQKKAERQKELKRK-------FEQLKSERLTRYQGVN-LYVKNLDDTIDDERLRKEFAP 276
+AQK+ E +KE KRK E K L V+ +YV NL + I DE +K +
Sbjct: 142 KAQKEDEEKKEKKRKKKVGLGAGEDAKEGWLDLGDKVHAVYVSNLPEDITDEEFQKFMSK 201
Query: 277 FGTI------TSAKVML---EDGRSKGFGFVCFSSPEEATKAVTEMNG 393
G I K L E+G+ KG G C+ E A ++G
Sbjct: 202 CGVIQPDIRTNKPKCKLYREENGKLKGDGRCCYIKKESVELACNILDG 249
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 32.3 bits (70), Expect = 0.21
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 19 GFGFVAFEDPDAAERACMELNGKELVEGKPL 111
GF FV FED AE AC +L+GK + EG +
Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 32.3 bits (70), Expect = 0.21
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 19 GFGFVAFEDPDAAERACMELNGKELVEGKPL 111
GF FV FED AE AC +L+GK + EG +
Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 32.3 bits (70), Expect = 0.21
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 19 GFGFVAFEDPDAAERACMELNGKELVEGKPL 111
GF FV FED AE AC +L+GK + EG +
Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.7 bits (66), Expect = 0.65
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 315
LYV NLD T+ ++ + F G++T KV+ ++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 30.7 bits (66), Expect = 0.65
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNG 84
+GFGFV F + +A+ +C LNG
Sbjct: 119 QGFGFVQFNEAGSADESCRSLNG 141
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 268 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 393
F PFG I + + +GFGFV F+ A ++ +NG
Sbjct: 104 FRPFGKIIAVNYFAQ----QGFGFVQFNEAGSADESCRSLNG 141
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 30.3 bits (65), Expect = 0.86
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKG--FGFVCFSSPEEATKAVTEM 387
+YV N + +D+E L + F G + KV+L D R F V F A+ M
Sbjct: 15 IYVANFSEEVDEELLEELFIQAGPV--VKVILRDVRDSNAKFALVEFEDELSVLFAIELM 72
Query: 388 NG 393
NG
Sbjct: 73 NG 74
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 30.3 bits (65), Expect = 0.86
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +1
Query: 58 ERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 174
E A +E +E E + L + A+K+AERQ+E+KRK E+
Sbjct: 945 ELAEIERKRRESEEKERLEI-EAKKEAERQREIKRKLEE 982
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 30.3 bits (65), Expect = 0.86
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVG-RAQKKAERQKELKRKFEQLKSER 189
+RGF + F + D A+++C +LN EL G+ + + + + +A K+ + Q +
Sbjct: 166 NRGFATITFRNADDAQKSCEQLNNFELA-GRCIRLSIKQESQAPAVKKEEASIHQRSLDD 224
Query: 190 LTRYQGVNL 216
+ QG +L
Sbjct: 225 VGDRQGFSL 233
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 30.3 bits (65), Expect = 0.86
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVG-RAQKKAERQKELKRKFEQLKSER 189
+RGF + F + D A+++C +LN EL G+ + + + + +A K+ + Q +
Sbjct: 311 NRGFATITFRNADDAQKSCEQLNNFELA-GRCIRLSIKQESQAPAVKKEEASIHQRSLDD 369
Query: 190 LTRYQGVNL 216
+ QG +L
Sbjct: 370 VGDRQGFSL 378
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 13 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYV 117
SRG+ FV + + + A A +G E+ GKPL V
Sbjct: 240 SRGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKV 274
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 220 VKNLDDTIDDERLRKEFAPFGTITSAKV---MLEDGRSKGFGFVCFSSPEEATKAVTEMN 390
+KNL + L + F+ +G I + + + +G+G+V + + E+A K++ M+
Sbjct: 137 IKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIKHMD 196
Query: 391 GRIVGTKPLYVAL 429
G + ++V +
Sbjct: 197 GGQIDGMAVHVEM 209
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 465 SQMGFA-VFLALS*SNIKRFCSNNTSIHFS 379
SQ+GF V+ N++ F +NNTSIH S
Sbjct: 151 SQLGFCCVYFVFMADNLEDFFNNNTSIHLS 180
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 16 RGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAER 144
+G F+ F +AAERA K ++GK L + + +A+R
Sbjct: 274 KGCAFIEFTTREAAERAAERSFNKTFIKGKRLTIRWGEPQAKR 316
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Frame = +1
Query: 205 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 378
G +Y+ ++ +L F +G+I S + + G +GF + F S + A KA+
Sbjct: 24 GQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAI 83
Query: 379 TE----MNGRIVGTKPLYVALAQRKE 444
+ ++G V +P +++ K+
Sbjct: 84 EQRPHVIDGDRVDVEPYIPLISKNKK 109
>Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical
protein C03C10.4 protein.
Length = 244
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +1
Query: 49 DAAERACMELNGKELVEGKPLYVGR--AQKKAERQKELKRKFEQLKSERLTRYQGVNLYV 222
+ A R C+E NG + + +P Y + + Q EL E ER Y +
Sbjct: 157 EMALRKCLEENGSAIKKSRPYYERKEVLTRTMNSQLELMSILEHEVQERKDSYSDSMRAL 216
Query: 223 KNLDDTIDDER 255
+ + D I ER
Sbjct: 217 EQISDQIHQER 227
>Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical
protein C07A9.8 protein.
Length = 453
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -3
Query: 423 NIKRFCSNNTSIHFSNRFCGFFRR*KTYESKTFAATILQHDLSRSNS 283
NI R+C + + F + G RR T E+ A +L H+L + NS
Sbjct: 170 NIIRYCVISQCLVFRDIHVGVRRRFPTLEAVAQAGIMLPHELEKFNS 216
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 121 RAQKKAERQKEL-KRKFEQLKSERLTR 198
RAQ+KA+ QKEL R+ EQ + E L R
Sbjct: 1257 RAQQKAQTQKELAARQAEQARVEELAR 1283
>AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical
protein H24K24.4 protein.
Length = 603
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 214 LYVKNLDDTIDDERLRKEFAPF-GTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 390
+++KN+ I ++ +K G + S KV + +V F +PE+A KA+ ++
Sbjct: 29 IHIKNIPTFIGFKQFKKVLEKILGDVKSKKVR----HMSDYAYVTFETPEDAQKAINLVD 84
Query: 391 G 393
G
Sbjct: 85 G 85
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 27.5 bits (58), Expect = 6.1
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +1
Query: 163 KFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSA-KVMLEDGRSKGFGF 339
+F++ + L YQG+ L +LD+ + K T A + + D R FG
Sbjct: 351 RFKRNDEDALRAYQGMALVYSDLDEHSKSLEMFKNLLELLMKTGATEEKILDTRVSIFGC 410
Query: 340 VCFSSPEEATKAVTEMNGRIV 402
+C + E+NG+I+
Sbjct: 411 MCKLDFTDLEPMFNELNGKIL 431
>Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical
protein C47E12.4c protein.
Length = 406
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 101 PSTNSLPFNSIHALSAASGSSKATKPKPR 15
P TN ++IH S SGSS P PR
Sbjct: 42 PVTNVTQVSAIHTTSMDSGSSTVQLPSPR 70
>Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical
protein C47E12.4b protein.
Length = 407
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 101 PSTNSLPFNSIHALSAASGSSKATKPKPR 15
P TN ++IH S SGSS P PR
Sbjct: 42 PVTNVTQVSAIHTTSMDSGSSTVQLPSPR 70
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 205 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 303
G++L TID E L EF FGT T A++
Sbjct: 81 GIHLRHGITKGTIDSEELISEFLNFGTTTPAQI 113
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 127 QKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKE 267
Q+ ER+K++ FE+ K E+L R + L+ KN + E+ +E
Sbjct: 256 QQNQEREKQINDDFEKRKLEKLQREK---LFEKNKQAKLQREKAHQE 299
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +1
Query: 127 QKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 252
Q+ ER+K++ FE+ E+L R + + + + I+D+
Sbjct: 227 QQNQEREKQINEDFEKRNQEKLKREEEIKQQNQEREKQINDD 268
>Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical
protein C08F8.6 protein.
Length = 380
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 85 KELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 192
KE+VE K + +KK E+++E K K+E K E L
Sbjct: 349 KEIVEEK-----KEEKKEEKKEEKKEKYEDDKKEEL 379
>Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical protein
ZK970.5 protein.
Length = 1143
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 160 RKFEQLKSERLTRY--QGVNLYVKNLDDTIDDERLRK 264
RK LT Y + V+ YV+NL D DDE +R+
Sbjct: 1097 RKIASFTDSELTNYSFRSVSPYVENLSDN-DDEEIRR 1132
>U80842-5|AAK71419.2| 305|Caenorhabditis elegans Serpentine
receptor, class i protein50 protein.
Length = 305
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 136 LFSGLVQHTRVFLQLIPCHSTPYMLFLLHQDLQ-KRQNQNH 17
+FSG+V + L I C+ Y + L+ +++Q K NQN+
Sbjct: 192 IFSGIVATFGIVLYCIICNFATYDMLLMLKEVQLKVSNQNY 232
>U61949-7|AAB03155.1| 510|Caenorhabditis elegans Hypothetical
protein F49E8.7a protein.
Length = 510
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -2
Query: 376 PLLWLLQEMKNIRIQNLC-CDHPPT*P 299
PLLW+ ++ + IQN C CD PP P
Sbjct: 175 PLLWMKAGIEKL-IQNNCQCDQPPIVP 200
>AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 1, isoform a
protein.
Length = 1281
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/42 (35%), Positives = 29/42 (69%)
Frame = +1
Query: 124 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDD 249
A+KKA+R ++++FE++K++R R+Q + + +TIDD
Sbjct: 1087 ARKKAKR---IRQQFEKVKTDRYRRFQD---FFDPVANTIDD 1122
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +1
Query: 202 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGR 321
+ +YV NL + +E+L + + +GT+ ++ + GR
Sbjct: 817 EAATVYVDNLPEGCSEEKLLRLCSCYGTVVEVRISKKGGR 856
>AC006625-10|AAK68271.1| 325|Caenorhabditis elegans Hypothetical
protein C55B7.11 protein.
Length = 325
Score = 27.1 bits (57), Expect = 8.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 345 TYESKTFAATILQHDLSRSNSSERC 271
+Y+ T+ ++Q+D +R NS RC
Sbjct: 184 SYKKFTYFTALIQYDFARCNSETRC 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,548,833
Number of Sequences: 27780
Number of extensions: 196638
Number of successful extensions: 1061
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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