Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S13A01NGRL0001_A24
(288 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X55542-1|CAA39148.1| 530|Drosophila melanogaster cyclin B protein. 29 0.73
AY102682-1|AAM27511.1| 530|Drosophila melanogaster LD23613p pro... 29 0.73
AJ006773-3|CAA07240.1| 500|Drosophila melanogaster cyclin B, ty... 29 0.73
AJ006773-2|CAA07239.1| 524|Drosophila melanogaster cyclin B, ty... 29 0.73
AJ006773-1|CAA07238.1| 530|Drosophila melanogaster cyclin B, ty... 29 0.73
AE013599-3472|AAM71124.1| 500|Drosophila melanogaster CG3510-PC... 29 0.73
AE013599-3471|AAG22197.1| 524|Drosophila melanogaster CG3510-PB... 29 0.73
AE013599-3470|AAM71123.1| 530|Drosophila melanogaster CG3510-PD... 29 0.73
AE013599-3469|AAF46904.1| 530|Drosophila melanogaster CG3510-PA... 29 0.73
AE014298-2542|AAF48711.1| 133|Drosophila melanogaster CG5172-PA... 28 2.2
BT001543-1|AAN71298.1| 1820|Drosophila melanogaster RE10062p pro... 27 2.9
AE014296-2895|AAN11706.1| 1820|Drosophila melanogaster CG6445-PB... 27 2.9
AE014296-2894|AAF49351.1| 1820|Drosophila melanogaster CG6445-PA... 27 2.9
X96601-1|CAA65421.1| 962|Drosophila melanogaster vinculin protein. 27 3.9
AY128501-1|AAM75094.1| 961|Drosophila melanogaster SD03117p pro... 27 3.9
AY118636-1|AAM50005.1| 1238|Drosophila melanogaster SD02122p pro... 27 3.9
AL009193-4|CAA15691.1| 961|Drosophila melanogaster EG:103B4.1,F... 27 3.9
AJ271845-1|CAB76376.1| 1238|Drosophila melanogaster SMC1 protein... 27 3.9
AF225909-1|AAF43149.1| 1238|Drosophila melanogaster cohesin subu... 27 3.9
AE014298-363|AAF45752.1| 961|Drosophila melanogaster CG3299-PA ... 27 3.9
AE014297-3454|AAF56231.1| 1238|Drosophila melanogaster CG6057-PA... 27 3.9
M33192-1|AAA28436.1| 530|Drosophila melanogaster protein ( D.me... 27 5.1
AE014134-2428|AAF53354.1| 611|Drosophila melanogaster CG16869-P... 27 5.1
>X55542-1|CAA39148.1| 530|Drosophila melanogaster cyclin B protein.
Length = 530
Score = 29.5 bits (63), Expect = 0.73
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 2 KVLVRVRKDLEVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKEDSKTVTNVR 178
K L ++R L + + +R++ VAV R +++L +DS VK+D+ + +R
Sbjct: 156 KSLTKLRAALAKPVMGVSGIRREPVAVSRKEAETKKELPETKKDSLEVKKDATRMPLIR 214
>AY102682-1|AAM27511.1| 530|Drosophila melanogaster LD23613p
protein.
Length = 530
Score = 29.5 bits (63), Expect = 0.73
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 2 KVLVRVRKDLEVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKEDSKTVTNVR 178
K L ++R L + + +R++ VAV R +++L +DS VK+D+ + +R
Sbjct: 156 KSLTKLRAALAKPVMGVSGIRREPVAVSRKEAETKKELPETKKDSLEVKKDATRMPLIR 214
>AJ006773-3|CAA07240.1| 500|Drosophila melanogaster cyclin B, type
III protein.
Length = 500
Score = 29.5 bits (63), Expect = 0.73
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 2 KVLVRVRKDLEVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKEDSKTVTNVR 178
K L ++R L + + +R++ VAV R +++L +DS VK+D+ + +R
Sbjct: 126 KSLTKLRAALAKPVMGVSGIRREPVAVSRKEAETKKELPETKKDSLEVKKDATRMPLIR 184
>AJ006773-2|CAA07239.1| 524|Drosophila melanogaster cyclin B, type
II protein.
Length = 524
Score = 29.5 bits (63), Expect = 0.73
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 2 KVLVRVRKDLEVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKEDSKTVTNVR 178
K L ++R L + + +R++ VAV R +++L +DS VK+D+ + +R
Sbjct: 150 KSLTKLRAALAKPVMGVSGIRREPVAVSRKEAETKKELPETKKDSLEVKKDATRMPLIR 208
>AJ006773-1|CAA07238.1| 530|Drosophila melanogaster cyclin B, type
I protein.
Length = 530
Score = 29.5 bits (63), Expect = 0.73
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 2 KVLVRVRKDLEVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKEDSKTVTNVR 178
K L ++R L + + +R++ VAV R +++L +DS VK+D+ + +R
Sbjct: 156 KSLTKLRAALAKPVMGVSGIRREPVAVSRKEAETKKELPETKKDSLEVKKDATRMPLIR 214
>AE013599-3472|AAM71124.1| 500|Drosophila melanogaster CG3510-PC,
isoform C protein.
Length = 500
Score = 29.5 bits (63), Expect = 0.73
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 2 KVLVRVRKDLEVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKEDSKTVTNVR 178
K L ++R L + + +R++ VAV R +++L +DS VK+D+ + +R
Sbjct: 126 KSLTKLRAALAKPVMGVSGIRREPVAVSRKEAETKKELPETKKDSLEVKKDATRMPLIR 184
>AE013599-3471|AAG22197.1| 524|Drosophila melanogaster CG3510-PB,
isoform B protein.
Length = 524
Score = 29.5 bits (63), Expect = 0.73
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 2 KVLVRVRKDLEVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKEDSKTVTNVR 178
K L ++R L + + +R++ VAV R +++L +DS VK+D+ + +R
Sbjct: 150 KSLTKLRAALAKPVMGVSGIRREPVAVSRKEAETKKELPETKKDSLEVKKDATRMPLIR 208
>AE013599-3470|AAM71123.1| 530|Drosophila melanogaster CG3510-PD,
isoform D protein.
Length = 530
Score = 29.5 bits (63), Expect = 0.73
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 2 KVLVRVRKDLEVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKEDSKTVTNVR 178
K L ++R L + + +R++ VAV R +++L +DS VK+D+ + +R
Sbjct: 156 KSLTKLRAALAKPVMGVSGIRREPVAVSRKEAETKKELPETKKDSLEVKKDATRMPLIR 214
>AE013599-3469|AAF46904.1| 530|Drosophila melanogaster CG3510-PA,
isoform A protein.
Length = 530
Score = 29.5 bits (63), Expect = 0.73
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 2 KVLVRVRKDLEVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKEDSKTVTNVR 178
K L ++R L + + +R++ VAV R +++L +DS VK+D+ + +R
Sbjct: 156 KSLTKLRAALAKPVMGVSGIRREPVAVSRKEAETKKELPETKKDSLEVKKDATRMPLIR 214
>AE014298-2542|AAF48711.1| 133|Drosophila melanogaster CG5172-PA,
isoform A protein.
Length = 133
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 3 RFWSGSGRIWRW*SVIWTMSGRIWWR*SGIRTWP 104
R+W+ R+WRW S W R WR R WP
Sbjct: 93 RWWTR--RLWRWQS-RWPRRTRRLWRRRSWRRWP 123
>BT001543-1|AAN71298.1| 1820|Drosophila melanogaster RE10062p
protein.
Length = 1820
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 2 KVLVRVRKDLEVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDS 136
KVL R D +VV DL DLVA ++ + A+ +E + D+
Sbjct: 432 KVLNASRLDYDVVDPDLRKFEFDLVASVKGVEKAKTRVEIHLLDA 476
>AE014296-2895|AAN11706.1| 1820|Drosophila melanogaster CG6445-PB,
isoform B protein.
Length = 1820
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 2 KVLVRVRKDLEVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDS 136
KVL R D +VV DL DLVA ++ + A+ +E + D+
Sbjct: 432 KVLNASRLDYDVVDPDLRKFEFDLVASVKGVEKAKTRVEIHLLDA 476
>AE014296-2894|AAF49351.1| 1820|Drosophila melanogaster CG6445-PA,
isoform A protein.
Length = 1820
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 2 KVLVRVRKDLEVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDS 136
KVL R D +VV DL DLVA ++ + A+ +E + D+
Sbjct: 432 KVLNASRLDYDVVDPDLRKFEFDLVASVKGVEKAKTRVEIHLLDA 476
>X96601-1|CAA65421.1| 962|Drosophila melanogaster vinculin protein.
Length = 962
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 32 EVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKEDSKTVTNV 175
E+V+SD +++L+A + A ED+ + ++ R D + TN+
Sbjct: 830 ELVLSDSRGSKRELIATAKKIAEASEDVTRLAKELARQCTDRRIRTNL 877
>AY128501-1|AAM75094.1| 961|Drosophila melanogaster SD03117p
protein.
Length = 961
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 32 EVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKEDSKTVTNV 175
E+V+SD +++L+A + A ED+ + ++ R D + TN+
Sbjct: 829 ELVLSDSRGSKRELIATAKKIAEASEDVTRLAKELARQCTDRRIRTNL 876
>AY118636-1|AAM50005.1| 1238|Drosophila melanogaster SD02122p
protein.
Length = 1238
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 8 LVRVRKDLEVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKED 154
L V +D+ SDL+ ++++ AV + + A E L +D+G++ D
Sbjct: 251 LFHVERDIRKFTSDLEVRQQEVKAVEQRKEAADEILREKKKDAGKITRD 299
>AL009193-4|CAA15691.1| 961|Drosophila melanogaster
EG:103B4.1,FBgn0004397;Vinc protein.
Length = 961
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 32 EVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKEDSKTVTNV 175
E+V+SD +++L+A + A ED+ + ++ R D + TN+
Sbjct: 829 ELVLSDSRGSKRELIATAKKIAEASEDVTRLAKELARQCTDRRIRTNL 876
>AJ271845-1|CAB76376.1| 1238|Drosophila melanogaster SMC1 protein
protein.
Length = 1238
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 8 LVRVRKDLEVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKED 154
L V +D+ SDL+ ++++ AV + + A E L +D+G++ D
Sbjct: 251 LFHVERDIRKFTSDLEVRQQEVKAVEQRKEAADEILREKKKDAGKITRD 299
>AF225909-1|AAF43149.1| 1238|Drosophila melanogaster cohesin subunit
protein.
Length = 1238
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 8 LVRVRKDLEVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKED 154
L V +D+ SDL+ ++++ AV + + A E L +D+G++ D
Sbjct: 251 LFHVERDIRKFTSDLEVRQQEVKAVEQRKEAADEILREKKKDAGKITRD 299
>AE014298-363|AAF45752.1| 961|Drosophila melanogaster CG3299-PA
protein.
Length = 961
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 32 EVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKEDSKTVTNV 175
E+V+SD +++L+A + A ED+ + ++ R D + TN+
Sbjct: 829 ELVLSDSRGSKRELIATAKKIAEASEDVTRLAKELARQCTDRRIRTNL 876
>AE014297-3454|AAF56231.1| 1238|Drosophila melanogaster CG6057-PA
protein.
Length = 1238
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 8 LVRVRKDLEVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKED 154
L V +D+ SDL+ ++++ AV + + A E L +D+G++ D
Sbjct: 251 LFHVERDIRKFTSDLEVRQQEVKAVEQRKEAADEILREKKKDAGKITRD 299
>M33192-1|AAA28436.1| 530|Drosophila melanogaster protein (
D.melanogaster cyclinB mRNA, complete cds. ).
Length = 530
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +2
Query: 2 KVLVRVRKDLEVVISDLDNVRKDLVAVIRDTDMAREDLEAVIRDSGRVKEDSKTVTNVR 178
K L ++ L + + +R++ VAV R +++L +DS VK+D+ + +R
Sbjct: 156 KSLTKLGAALAKPVMGVSGIRREPVAVSRKEAETKKELPETKKDSLEVKKDATRMPLIR 214
>AE014134-2428|AAF53354.1| 611|Drosophila melanogaster CG16869-PA
protein.
Length = 611
Score = 26.6 bits (56), Expect = 5.1
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 247 IRVLGILXXXXXXXXXXHWNRIHPDIGYRLRILLDPARIPD-YRLQILPGHVRIPD 83
+R LG+L NR++ G R+ LL + D YR+++L GH++ D
Sbjct: 415 LRKLGMLRDNKWKELPARLNRLYIQ-GLRVVFLLPVFYVLDRYRVEVLAGHIKADD 469
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,477,461
Number of Sequences: 53049
Number of extensions: 111043
Number of successful extensions: 591
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 486883320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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