BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S13A01NGRL0001_A23
(248 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069864-1|AAL40009.1| 439|Drosophila melanogaster SD10604p pro... 29 0.86
AE013599-810|AAF58975.2| 439|Drosophila melanogaster CG8008-PA ... 29 0.86
AY058375-1|AAL13604.1| 897|Drosophila melanogaster GH14288p pro... 28 1.5
AE013599-1191|AAF58736.3| 897|Drosophila melanogaster CG11919-P... 28 1.5
BT023346-1|AAY55762.1| 252|Drosophila melanogaster IP10301p pro... 27 3.5
BT023286-1|AAY55702.1| 252|Drosophila melanogaster IP10101p pro... 27 3.5
AE014296-598|AAN11544.1| 261|Drosophila melanogaster CG32277-PA... 27 3.5
AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L lon... 26 6.1
AF113847-1|AAD37500.1| 2151|Drosophila melanogaster kismet protein. 26 6.1
AE014134-63|AAF51530.1| 2151|Drosophila melanogaster CG3696-PB, ... 26 6.1
AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA, ... 26 6.1
>AY069864-1|AAL40009.1| 439|Drosophila melanogaster SD10604p
protein.
Length = 439
Score = 29.1 bits (62), Expect = 0.86
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 3 CVQAFVKLYIILFVPKRVSFHFGQK 77
C+ F L+II FVP+ + FH Q+
Sbjct: 101 CIVTFATLFIIFFVPESLHFHKEQE 125
>AE013599-810|AAF58975.2| 439|Drosophila melanogaster CG8008-PA
protein.
Length = 439
Score = 29.1 bits (62), Expect = 0.86
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 3 CVQAFVKLYIILFVPKRVSFHFGQK 77
C+ F L+II FVP+ + FH Q+
Sbjct: 101 CIVTFATLFIIFFVPESLHFHKEQE 125
>AY058375-1|AAL13604.1| 897|Drosophila melanogaster GH14288p
protein.
Length = 897
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 165 VMTLTVATVQAVMIHLQTVHLQMIHLQT 248
V T T A + HL+ VHL+ IHL+T
Sbjct: 260 VGTATYAHYYLIFAHLRHVHLKCIHLET 287
>AE013599-1191|AAF58736.3| 897|Drosophila melanogaster CG11919-PA,
isoform A protein.
Length = 897
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 165 VMTLTVATVQAVMIHLQTVHLQMIHLQT 248
V T T A + HL+ VHL+ IHL+T
Sbjct: 260 VGTATYAHYYLIFAHLRHVHLKCIHLET 287
>BT023346-1|AAY55762.1| 252|Drosophila melanogaster IP10301p
protein.
Length = 252
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 221 NCLKMNHHCLNCRYCQSHDPSDHASGVC 138
NC+ HCL RY Q D + HA C
Sbjct: 51 NCVLTAAHCLEGRYQQVRDLTVHAQQQC 78
>BT023286-1|AAY55702.1| 252|Drosophila melanogaster IP10101p
protein.
Length = 252
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 221 NCLKMNHHCLNCRYCQSHDPSDHASGVC 138
NC+ HCL RY Q D + HA C
Sbjct: 51 NCVLTAAHCLEGRYQQVRDLTVHAQQQC 78
>AE014296-598|AAN11544.1| 261|Drosophila melanogaster CG32277-PA
protein.
Length = 261
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 221 NCLKMNHHCLNCRYCQSHDPSDHASGVC 138
NC+ HCL RY Q D + HA C
Sbjct: 60 NCVLTAAHCLEGRYQQVRDLTVHAQQQC 87
>AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L long
isoform protein.
Length = 5322
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 174 LTVATVQAVMIHLQTVHLQMI 236
+T+ T Q V HLQT H+Q +
Sbjct: 3834 ITITTDQGVTKHLQTSHMQQV 3854
>AF113847-1|AAD37500.1| 2151|Drosophila melanogaster kismet protein.
Length = 2151
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 174 LTVATVQAVMIHLQTVHLQMI 236
+T+ T Q V HLQT H+Q +
Sbjct: 663 ITITTDQGVTKHLQTSHMQQV 683
>AE014134-63|AAF51530.1| 2151|Drosophila melanogaster CG3696-PB,
isoform B protein.
Length = 2151
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 174 LTVATVQAVMIHLQTVHLQMI 236
+T+ T Q V HLQT H+Q +
Sbjct: 663 ITITTDQGVTKHLQTSHMQQV 683
>AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA,
isoform A protein.
Length = 5322
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 174 LTVATVQAVMIHLQTVHLQMI 236
+T+ T Q V HLQT H+Q +
Sbjct: 3834 ITITTDQGVTKHLQTSHMQQV 3854
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,715,171
Number of Sequences: 53049
Number of extensions: 171435
Number of successful extensions: 549
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 24,988,368
effective HSP length: 62
effective length of database: 21,699,330
effective search space used: 433986600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -