Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S13A01NGRL0001_A19
(359 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 26 0.16
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 0.36
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 0.36
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 0.83
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 0.83
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 1.9
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 21 3.3
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 4.4
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 20 7.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 20 7.7
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 20 7.7
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 25.8 bits (54), Expect = 0.16
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 243 EGSLVFLRPQASDEGQYQCFAETPAG 320
EGSL +D G+Y C+ E G
Sbjct: 1328 EGSLFIKEVDRTDAGEYSCYVENTFG 1353
Score = 25.4 bits (53), Expect = 0.21
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +3
Query: 222 NAALRKDEGSLVFLRPQASDEGQYQCFAETPAGVASSRVI 341
N +R+ G+L+ + D G+Y C G S +
Sbjct: 262 NERVRQVSGTLIIREARVEDSGKYLCIVNNSVGGESVETV 301
Score = 25.4 bits (53), Expect = 0.21
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 180 SWQKDGKSFNWQEHNAALRKDEGSLVFLRPQASDEGQYQCF 302
SW KDGK +E A LR + + D+G YQCF
Sbjct: 340 SWLKDGKPLGLEE--AVLRIES-------VKKEDKGMYQCF 371
Score = 25.0 bits (52), Expect = 0.27
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Frame = +3
Query: 246 GSLVFLRPQASDEGQ------YQCFAETPAGVASSRVISFR 350
G+LVF +A D Q Y C A +PAG SR ++ R
Sbjct: 58 GNLVFPPFRAEDYRQEVHAQVYSCLARSPAGSVHSRDVNVR 98
Score = 24.2 bits (50), Expect = 0.48
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 222 NAALRKDEGSLVFLRPQASDEGQYQCFAETPAGVASSRVI 341
N + ++G+L Q ++EG Y C A G S VI
Sbjct: 730 NPDISVEDGTLSINNIQKTNEGYYLCEAVNGIGAGLSAVI 769
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.6 bits (51), Expect = 0.36
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 279 DEGQYQCFAETPAGVASSRV 338
D G Y+C A P G AS+ +
Sbjct: 304 DNGIYRCSASNPGGEASAEI 323
Score = 22.2 bits (45), Expect = 1.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 279 DEGQYQCFAETPAG 320
D G+Y C AE AG
Sbjct: 493 DGGEYSCMAENRAG 506
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.6 bits (51), Expect = 0.36
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 279 DEGQYQCFAETPAGVASSRV 338
D G Y+C A P G AS+ +
Sbjct: 304 DNGIYRCSASNPGGEASAEI 323
Score = 22.2 bits (45), Expect = 1.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 279 DEGQYQCFAETPAG 320
D G+Y C AE AG
Sbjct: 493 DGGEYSCMAENRAG 506
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 0.83
Identities = 12/54 (22%), Positives = 21/54 (38%)
Frame = +3
Query: 183 WQKDGKSFNWQEHNAALRKDEGSLVFLRPQASDEGQYQCFAETPAGVASSRVIS 344
W+++G ++GSL + Q G Y C A V + V++
Sbjct: 344 WRRNGADLETLNEPEIRVFNDGSLYLTKVQLIHAGNYTCHAVRNQDVVQTHVLT 397
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 23.4 bits (48), Expect = 0.83
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 294 GIGPRQTLAVSGIPGILHLCG 232
GIGP++ L GIP ++ L G
Sbjct: 334 GIGPKEHLRSLGIPVVVDLPG 354
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.2 bits (45), Expect = 1.9
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 331 ELATPAGVSAKHWYWPSSDACGLRNTRDPSSLRRAALC 218
EL+ P ++ + SSD C R + P+ ++ LC
Sbjct: 154 ELSQPGSLNG----YGSSDGCDARKKKGPTPRQQEELC 187
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.4 bits (43), Expect = 3.3
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +2
Query: 44 IIVGSALPVDKYPVLKDQPAEVLFKENNPT 133
+++G+ +DK+ A + K+N PT
Sbjct: 203 VLIGAPNEIDKFYGTPGYTAPEVIKQNRPT 232
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.0 bits (42), Expect = 4.4
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 122 SP*RGPRPVGLSAPGIYPREALSPQ 48
SP P G S P +YP SPQ
Sbjct: 380 SPYGYPIGSGGSFPSLYPMATTSPQ 404
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 20.2 bits (40), Expect = 7.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +2
Query: 113 FKENNPTVLECLIERKRSG 169
F E V +CL++++R+G
Sbjct: 281 FSEYWEEVFDCLLKKERNG 299
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 20.2 bits (40), Expect = 7.7
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +2
Query: 86 LKDQPAEVLFKENNPTVLECLIERKRSGSQVLLAKGW 196
LK + K+N TV I + +G L K W
Sbjct: 480 LKPNDKSQVIKQNTWTVFRDAITQTGTGPAFLTIKEW 516
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 20.2 bits (40), Expect = 7.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +2
Query: 113 FKENNPTVLECLIERKRSG 169
F E V +CL++++R+G
Sbjct: 371 FSEYWEEVFDCLLKKERNG 389
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,506
Number of Sequences: 438
Number of extensions: 2154
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8432340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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