Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S13A01NGRL0001_A18
         (224 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264336-1|BAF44091.1|   21|Apis mellifera ecdysone-induced prot...    21   2.5  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    19   5.7  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               19   7.5  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          19   9.9  

>AB264336-1|BAF44091.1|   21|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 21

 Score = 20.6 bits (41), Expect = 2.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 196 LTGRSNGVLDYHQA 155
           L G  NGV++YH A
Sbjct: 8   LKGILNGVVNYHNA 21


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 223 HRHHACFVRLTGRSNGVLDYHQ 158
           H HHA    + G S  + + HQ
Sbjct: 280 HVHHANHHAILGHSGFLCERHQ 301


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 19.0 bits (37), Expect = 7.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 94  DHSTISSHALPA*KYSEYCIDELHFH 17
           D++      L A K+S   ID + FH
Sbjct: 103 DNAKNEDKCLTAQKFSRCVIDYVKFH 128


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 144 GKYSICTGDSPPQS 103
           G Y   +GDSP  S
Sbjct: 65  GSYDSSSGDSPVSS 78


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,592
Number of Sequences: 438
Number of extensions: 1290
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3533460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)