Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S13A01NGRL0001_A17
(343 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U81031-2|AAC39524.2| 210|Homo sapiens SAS protein. 58 7e-09
U01160-1|AAA17782.1| 210|Homo sapiens SAS protein. 58 7e-09
CR407647-1|CAG28575.1| 210|Homo sapiens SAS protein. 58 7e-09
BC010377-1|AAH10377.1| 210|Homo sapiens tetraspanin 31 protein. 58 7e-09
AB209699-1|BAD92936.1| 205|Homo sapiens sarcoma amplified seque... 58 7e-09
CR542107-1|CAG46904.1| 204|Homo sapiens TM4SF13 protein. 53 2e-07
BC033863-1|AAH33863.1| 204|Homo sapiens tetraspanin 13 protein. 53 2e-07
AY358995-1|AAQ89354.1| 204|Homo sapiens NET-6 protein. 53 2e-07
AF120265-1|AAD17294.1| 204|Homo sapiens tetraspan NET-6 protein. 53 2e-07
AF100759-1|AAD43023.1| 204|Homo sapiens transmembrane 4 superfa... 53 2e-07
AL356104-4|CAH72941.1| 1037|Homo sapiens novel protein similar t... 31 1.2
AL158169-5|CAH70011.1| 1037|Homo sapiens novel protein similar t... 31 1.2
AK074121-1|BAB84947.1| 491|Homo sapiens FLJ00193 protein protein. 31 1.2
S80335-1|AAB21332.1| 798|Homo sapiens integrin beta 7 subunit p... 30 1.6
S49378-1|AAB23688.1| 798|Homo sapiens integrin beta 7 subunit p... 30 1.6
M68892-1|AAA59184.1| 798|Homo sapiens integrin beta-7 subunit p... 30 1.6
M62880-1|AAA59185.1| 798|Homo sapiens integrin beta-7 subunit p... 30 1.6
L23823-1|AAA36118.1| 798|Homo sapiens integrin beta 7 subunit p... 30 1.6
BC015916-1|AAH15916.1| 798|Homo sapiens ITGB7 protein protein. 30 1.6
U57523-1|AAB06946.1| 446|Homo sapiens protein ( Human nel homol... 30 2.2
D83017-1|BAA11680.1| 810|Homo sapiens nel-related protein protein. 30 2.2
BC096103-1|AAH96103.1| 763|Homo sapiens NELL1 protein protein. 30 2.2
BC096102-1|AAH96102.1| 810|Homo sapiens NEL-like 1 (chicken) pr... 30 2.2
BC096101-1|AAH96101.1| 810|Homo sapiens NEL-like 1 (chicken) pr... 30 2.2
BC096100-1|AAH96100.1| 763|Homo sapiens NELL1 protein protein. 30 2.2
BC069674-1|AAH69674.1| 810|Homo sapiens nel-like 1, precursor p... 30 2.2
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 29 2.9
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 29 2.9
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 29 5.0
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 29 5.0
M35198-1|AAA36122.2| 788|Homo sapiens integrin beta-subunit pro... 28 8.7
BC121178-1|AAI21179.1| 788|Homo sapiens integrin, beta 6 protein. 28 8.7
AC080166-2|AAY24053.1| 449|Homo sapiens unknown protein. 28 8.7
>U81031-2|AAC39524.2| 210|Homo sapiens SAS protein.
Length = 210
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = +2
Query: 119 IMCGGFTCSKNALIALNXXXXXXXXXXXXXXXXXQASSLVTNLPIVGGILACGVFXXXXX 298
++CGGF CSKNAL ALN + LV+++ I+GG++A GVF
Sbjct: 1 MVCGGFACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGGVIAVGVFLLLIA 60
Query: 299 XXXXXXXMKHHQVML 343
+ HHQV+L
Sbjct: 61 VAGLVGAVNHHQVLL 75
>U01160-1|AAA17782.1| 210|Homo sapiens SAS protein.
Length = 210
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = +2
Query: 119 IMCGGFTCSKNALIALNXXXXXXXXXXXXXXXXXQASSLVTNLPIVGGILACGVFXXXXX 298
++CGGF CSKNAL ALN + LV+++ I+GG++A GVF
Sbjct: 1 MVCGGFACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGGVIAVGVFLLLIA 60
Query: 299 XXXXXXXMKHHQVML 343
+ HHQV+L
Sbjct: 61 VAGLVGAVNHHQVLL 75
>CR407647-1|CAG28575.1| 210|Homo sapiens SAS protein.
Length = 210
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = +2
Query: 119 IMCGGFTCSKNALIALNXXXXXXXXXXXXXXXXXQASSLVTNLPIVGGILACGVFXXXXX 298
++CGGF CSKNAL ALN + LV+++ I+GG++A GVF
Sbjct: 1 MVCGGFACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGGVIAVGVFLLLIA 60
Query: 299 XXXXXXXMKHHQVML 343
+ HHQV+L
Sbjct: 61 VAGLVGAVNHHQVLL 75
>BC010377-1|AAH10377.1| 210|Homo sapiens tetraspanin 31 protein.
Length = 210
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = +2
Query: 119 IMCGGFTCSKNALIALNXXXXXXXXXXXXXXXXXQASSLVTNLPIVGGILACGVFXXXXX 298
++CGGF CSKNAL ALN + LV+++ I+GG++A GVF
Sbjct: 1 MVCGGFACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGGVIAVGVFLLLIA 60
Query: 299 XXXXXXXMKHHQVML 343
+ HHQV+L
Sbjct: 61 VAGLVGAVNHHQVLL 75
>AB209699-1|BAD92936.1| 205|Homo sapiens sarcoma amplified sequence
variant protein.
Length = 205
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = +2
Query: 119 IMCGGFTCSKNALIALNXXXXXXXXXXXXXXXXXQASSLVTNLPIVGGILACGVFXXXXX 298
++CGGF CSKNAL ALN + LV+++ I+GG++A GVF
Sbjct: 31 MVCGGFACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGGVIAVGVFLLLIA 90
Query: 299 XXXXXXXMKHHQVML 343
+ HHQV+L
Sbjct: 91 VAGLVGAVNHHQVLL 105
>CR542107-1|CAG46904.1| 204|Homo sapiens TM4SF13 protein.
Length = 204
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = +2
Query: 119 IMCGGFTCSKNALIALNXXXXXXXXXXXXXXXXXQASSLVTNLPIVGGILACGVFXXXXX 298
++CGGF CSKN L ALN L+++L +VG ++A G+F
Sbjct: 1 MVCGGFACSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLRVVGVVIAVGIFLFLIA 60
Query: 299 XXXXXXXMKHHQVML 343
+KHHQV+L
Sbjct: 61 LVGLIGAVKHHQVLL 75
>BC033863-1|AAH33863.1| 204|Homo sapiens tetraspanin 13 protein.
Length = 204
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = +2
Query: 119 IMCGGFTCSKNALIALNXXXXXXXXXXXXXXXXXQASSLVTNLPIVGGILACGVFXXXXX 298
++CGGF CSKN L ALN L+++L +VG ++A G+F
Sbjct: 1 MVCGGFACSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLRVVGVVIAVGIFLFLIA 60
Query: 299 XXXXXXXMKHHQVML 343
+KHHQV+L
Sbjct: 61 LVGLIGAVKHHQVLL 75
>AY358995-1|AAQ89354.1| 204|Homo sapiens NET-6 protein.
Length = 204
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = +2
Query: 119 IMCGGFTCSKNALIALNXXXXXXXXXXXXXXXXXQASSLVTNLPIVGGILACGVFXXXXX 298
++CGGF CSKN L ALN L+++L +VG ++A G+F
Sbjct: 1 MVCGGFACSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLRVVGVVIAVGIFLFLIA 60
Query: 299 XXXXXXXMKHHQVML 343
+KHHQV+L
Sbjct: 61 LVGLIGAVKHHQVLL 75
>AF120265-1|AAD17294.1| 204|Homo sapiens tetraspan NET-6 protein.
Length = 204
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = +2
Query: 119 IMCGGFTCSKNALIALNXXXXXXXXXXXXXXXXXQASSLVTNLPIVGGILACGVFXXXXX 298
++CGGF CSKN L ALN L+++L +VG ++A G+F
Sbjct: 1 MVCGGFACSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLRVVGVVIAVGIFLFLIA 60
Query: 299 XXXXXXXMKHHQVML 343
+KHHQV+L
Sbjct: 61 LVGLIGAVKHHQVLL 75
>AF100759-1|AAD43023.1| 204|Homo sapiens transmembrane 4
superfamily protein protein.
Length = 204
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = +2
Query: 119 IMCGGFTCSKNALIALNXXXXXXXXXXXXXXXXXQASSLVTNLPIVGGILACGVFXXXXX 298
++CGGF CSKN L ALN L+++L +VG ++A G+F
Sbjct: 1 MVCGGFACSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLRVVGVVIAVGIFLFLIA 60
Query: 299 XXXXXXXMKHHQVML 343
+KHHQV+L
Sbjct: 61 LVGLIGAVKHHQVLL 75
>AL356104-4|CAH72941.1| 1037|Homo sapiens novel protein similar to
mouse Jedi soluble isoform 736 protein protein.
Length = 1037
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +1
Query: 157 NCVKYSLC--GGCKHPHIGSCICAGIITGH 240
NC + C GG HP GSCIC TGH
Sbjct: 660 NCAQTCQCHHGGTCHPQDGSCICPLGWTGH 689
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 157 NCVKYSLCG-GCK-HPHIGSCICAGIITGHKLANCR 258
NC + CG G K HP G+C+C GH A CR
Sbjct: 703 NCSQPCQCGPGEKCHPETGACVCP---PGHSGAPCR 735
>AL158169-5|CAH70011.1| 1037|Homo sapiens novel protein similar to
mouse Jedi soluble isoform 736 protein protein.
Length = 1037
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +1
Query: 157 NCVKYSLC--GGCKHPHIGSCICAGIITGH 240
NC + C GG HP GSCIC TGH
Sbjct: 660 NCAQTCQCHHGGTCHPQDGSCICPLGWTGH 689
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 157 NCVKYSLCG-GCK-HPHIGSCICAGIITGHKLANCR 258
NC + CG G K HP G+C+C GH A CR
Sbjct: 703 NCSQPCQCGPGEKCHPETGACVCP---PGHSGAPCR 735
>AK074121-1|BAB84947.1| 491|Homo sapiens FLJ00193 protein protein.
Length = 491
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +1
Query: 157 NCVKYSLC--GGCKHPHIGSCICAGIITGH 240
NC + C GG HP GSCIC TGH
Sbjct: 114 NCAQTCQCHHGGTCHPQDGSCICPLGWTGH 143
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 157 NCVKYSLCG-GCK-HPHIGSCICAGIITGHKLANCR 258
NC + CG G K HP G+C+C GH A CR
Sbjct: 157 NCSQPCQCGPGEKCHPETGACVCP---PGHSGAPCR 189
>S80335-1|AAB21332.1| 798|Homo sapiens integrin beta 7 subunit
protein.
Length = 798
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Frame = +1
Query: 175 LCGGCKHPHIGSCICAGIITGHKL----ANCRGYSGMWCISYFNFIIGASWSYETSSGYA 342
LC G H G C C+G +GH A+C + G+ C + G + +G A
Sbjct: 536 LCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRA 595
>S49378-1|AAB23688.1| 798|Homo sapiens integrin beta 7 subunit
protein.
Length = 798
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Frame = +1
Query: 175 LCGGCKHPHIGSCICAGIITGHKL----ANCRGYSGMWCISYFNFIIGASWSYETSSGYA 342
LC G H G C C+G +GH A+C + G+ C + G + +G A
Sbjct: 536 LCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRA 595
>M68892-1|AAA59184.1| 798|Homo sapiens integrin beta-7 subunit
protein.
Length = 798
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Frame = +1
Query: 175 LCGGCKHPHIGSCICAGIITGHKL----ANCRGYSGMWCISYFNFIIGASWSYETSSGYA 342
LC G H G C C+G +GH A+C + G+ C + G + +G A
Sbjct: 536 LCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRA 595
>M62880-1|AAA59185.1| 798|Homo sapiens integrin beta-7 subunit
protein.
Length = 798
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Frame = +1
Query: 175 LCGGCKHPHIGSCICAGIITGHKL----ANCRGYSGMWCISYFNFIIGASWSYETSSGYA 342
LC G H G C C+G +GH A+C + G+ C + G + +G A
Sbjct: 536 LCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRA 595
>L23823-1|AAA36118.1| 798|Homo sapiens integrin beta 7 subunit
protein.
Length = 798
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Frame = +1
Query: 175 LCGGCKHPHIGSCICAGIITGHKL----ANCRGYSGMWCISYFNFIIGASWSYETSSGYA 342
LC G H G C C+G +GH A+C + G+ C + G + +G A
Sbjct: 536 LCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRA 595
>BC015916-1|AAH15916.1| 798|Homo sapiens ITGB7 protein protein.
Length = 798
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Frame = +1
Query: 175 LCGGCKHPHIGSCICAGIITGHKL----ANCRGYSGMWCISYFNFIIGASWSYETSSGYA 342
LC G H G C C+G +GH A+C + G+ C + G + +G A
Sbjct: 536 LCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRA 595
>U57523-1|AAB06946.1| 446|Homo sapiens protein ( Human nel homolog
mRNA, partial cds. ).
Length = 446
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 154 FNCVKYSLCGGCKHPHIGSCICAGIITGHKLANCRGYSG 270
F+C ++ CG +H + IC + GH GY G
Sbjct: 90 FSCTEHDECGSGQHNCDENAICTNTVQGHSCTCKPGYVG 128
>D83017-1|BAA11680.1| 810|Homo sapiens nel-related protein protein.
Length = 810
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 154 FNCVKYSLCGGCKHPHIGSCICAGIITGHKLANCRGYSG 270
F+C ++ CG +H + IC + GH GY G
Sbjct: 472 FSCTEHDECGSGQHNCDENAICTNTVQGHSCTCKPGYVG 510
>BC096103-1|AAH96103.1| 763|Homo sapiens NELL1 protein protein.
Length = 763
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 154 FNCVKYSLCGGCKHPHIGSCICAGIITGHKLANCRGYSG 270
F+C ++ CG +H + IC + GH GY G
Sbjct: 472 FSCTEHDECGSGQHNCDENAICTNTVQGHSCTCKPGYVG 510
>BC096102-1|AAH96102.1| 810|Homo sapiens NEL-like 1 (chicken)
protein.
Length = 810
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 154 FNCVKYSLCGGCKHPHIGSCICAGIITGHKLANCRGYSG 270
F+C ++ CG +H + IC + GH GY G
Sbjct: 472 FSCTEHDECGSGQHNCDENAICTNTVQGHSCTCKPGYVG 510
>BC096101-1|AAH96101.1| 810|Homo sapiens NEL-like 1 (chicken)
protein.
Length = 810
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 154 FNCVKYSLCGGCKHPHIGSCICAGIITGHKLANCRGYSG 270
F+C ++ CG +H + IC + GH GY G
Sbjct: 472 FSCTEHDECGSGQHNCDENAICTNTVQGHSCTCKPGYVG 510
>BC096100-1|AAH96100.1| 763|Homo sapiens NELL1 protein protein.
Length = 763
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 154 FNCVKYSLCGGCKHPHIGSCICAGIITGHKLANCRGYSG 270
F+C ++ CG +H + IC + GH GY G
Sbjct: 472 FSCTEHDECGSGQHNCDENAICTNTVQGHSCTCKPGYVG 510
>BC069674-1|AAH69674.1| 810|Homo sapiens nel-like 1, precursor
protein.
Length = 810
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 154 FNCVKYSLCGGCKHPHIGSCICAGIITGHKLANCRGYSG 270
F+C ++ CG +H + IC + GH GY G
Sbjct: 472 FSCTEHDECGSGQHNCDENAICTNTVQGHSCTCKPGYVG 510
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 175 LCGGCKHPHIGSCICAGIITGHKLAN-C-RGYSGMWCISYFNFIIGASWSYETSS 333
L GG PH G C+C TG K + C RG+ G C + GA+ + T +
Sbjct: 901 LNGGLCDPHTGRCLCPAGWTGDKCQSPCLRGWFGEACAQRCSCPPGAACHHVTGA 955
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 175 LCGGCKHPHIGSCICAGIITGHKLAN-C-RGYSGMWCISYFNFIIGASWSYETSS 333
L GG PH G C+C TG K + C RG+ G C + GA+ + T +
Sbjct: 901 LNGGLCDPHTGRCLCPAGWTGDKCQSPCLRGWFGEACAQRCSCPPGAACHHVTGA 955
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 175 LCGGCKHPHIGSCICAGIITGHKLAN-C-RGYSGMWC 279
L GG PH G C+C TG K + C RG+ G C
Sbjct: 1167 LNGGLCDPHTGRCLCPAGWTGDKCQSPCLRGWFGEAC 1203
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 175 LCGGCKHPHIGSCICAGIITGHKLAN-C-RGYSGMWC 279
L GG PH G C+C TG K + C RG+ G C
Sbjct: 918 LNGGLCDPHTGRCLCPAGWTGDKCQSPCLRGWFGEAC 954
>M35198-1|AAA36122.2| 788|Homo sapiens integrin beta-subunit
protein.
Length = 788
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 154 FNCVKYS--LCGGCKHPHIGSCICAGIITGHKLANC 255
F+CV++ LCGG G C+C TG + NC
Sbjct: 542 FSCVRHKGLLCGGNGDCDCGECVCRSGWTG-EYCNC 576
>BC121178-1|AAI21179.1| 788|Homo sapiens integrin, beta 6 protein.
Length = 788
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 154 FNCVKYS--LCGGCKHPHIGSCICAGIITGHKLANC 255
F+CV++ LCGG G C+C TG + NC
Sbjct: 542 FSCVRHKGLLCGGNGDCDCGECVCRSGWTG-EYCNC 576
>AC080166-2|AAY24053.1| 449|Homo sapiens unknown protein.
Length = 449
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 154 FNCVKYS--LCGGCKHPHIGSCICAGIITGHKLANC 255
F+CV++ LCGG G C+C TG + NC
Sbjct: 203 FSCVRHKGLLCGGNGDCDCGECVCRSGWTG-EYCNC 237
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,850,953
Number of Sequences: 237096
Number of extensions: 922460
Number of successful extensions: 1422
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1412
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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