Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S13A01NGRL0001_A17
         (343 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    23   1.0  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   1.3  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    22   1.8  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   4.1  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    20   7.2  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   7.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   9.5  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           20   9.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   9.5  

>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 139 SKSTTHNATFYLESHLTNLKMLLY*DNY 56
           S  T HN   Y  ++  N K L Y  NY
Sbjct: 86  SNKTIHNNNNYNNNNYNNYKKLYYNINY 113


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 217 CAGIITGHKLANCRGYSGMWCI 282
           C+GI++ HK+A    Y  +W +
Sbjct: 123 CSGIVSAHKIA-IDEYERLWVL 143


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 139 SKSTTHNATFYLESHLTNLKMLLY*DNY 56
           S  T HN   Y  ++  N K L Y  NY
Sbjct: 86  SNKTIHNNNNYKYNYNNNCKKLYYNINY 113


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -1

Query: 259 PYNWQVCDQ 233
           P NW++CD+
Sbjct: 25  PNNWRICDR 33


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 268 QNTPYNWQV 242
           QN PY WQ+
Sbjct: 85  QNYPYEWQL 93


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 70  Y*DNYFYDK 44
           Y DNYFY K
Sbjct: 138 YNDNYFYSK 146


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 148 KRFNCVKYSLCGGCKHPHIGSCICAGIITG 237
           KR   +  S  G   H H  S + AG+  G
Sbjct: 201 KRITLIGLSAGGASVHYHYLSPLSAGLFQG 230


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 148 KRFNCVKYSLCGGCKHPHIGSCICAGIITG 237
           KR   +  S  G   H H  S + AG+  G
Sbjct: 72  KRITLIGLSAGGASVHYHYLSPLSAGLFQG 101


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 148 KRFNCVKYSLCGGCKHPHIGSCICAGIITG 237
           KR   +  S  G   H H  S + AG+  G
Sbjct: 201 KRITLIGLSAGGASVHYHYLSPLSAGLFQG 230


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,494
Number of Sequences: 438
Number of extensions: 2026
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)