Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S13A01NGRL0001_A15
         (191 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022163-1|AAY51557.1|  987|Drosophila melanogaster IP01335p pro...    27   4.8  
AY089601-1|AAL90339.1|  987|Drosophila melanogaster RE19601p pro...    27   4.8  
AE014134-3543|AAF57234.2|  987|Drosophila melanogaster CG31612-P...    27   4.8  
AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-P...    26   8.4  

>BT022163-1|AAY51557.1|  987|Drosophila melanogaster IP01335p
           protein.
          Length = 987

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 109 RHTFSCHSFRNNGSPA*TLESQETSYCECD 20
           RHT SC    +  +PA   ++Q+ S   CD
Sbjct: 669 RHTRSCQPLASTSTPADLSQAQKKSMYSCD 698


>AY089601-1|AAL90339.1|  987|Drosophila melanogaster RE19601p
           protein.
          Length = 987

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 109 RHTFSCHSFRNNGSPA*TLESQETSYCECD 20
           RHT SC    +  +PA   ++Q+ S   CD
Sbjct: 669 RHTRSCQPLASTSTPADLSQAQKKSMYSCD 698


>AE014134-3543|AAF57234.2|  987|Drosophila melanogaster CG31612-PA
           protein.
          Length = 987

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 109 RHTFSCHSFRNNGSPA*TLESQETSYCECD 20
           RHT SC    +  +PA   ++Q+ S   CD
Sbjct: 669 RHTRSCQPLASTSTPADLSQAQKKSMYSCD 698


>AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-PA
            protein.
          Length = 2282

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
 Frame = -2

Query: 130  QRQSCRC----RHTFSCHSFRNNGSPA*TLESQETSYCEC 23
            Q++SC      +HT+  +  +N G     ++ Q  SYC C
Sbjct: 2232 QKESCSLAEVPKHTYCHNDSQNPGQEMAEIKEQGVSYCPC 2271


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,346,936
Number of Sequences: 53049
Number of extensions: 92845
Number of successful extensions: 217
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 24,988,368
effective HSP length: 43
effective length of database: 22,707,261
effective search space used: 454145220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)