Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S13A01NGRL0001_A15
         (191 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    21   1.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   1.8  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    19   7.1  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    18   9.4  

>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 1.3
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 64  QVTRCYERSDN*MCVY 111
           +VTR YE SDN + V+
Sbjct: 103 KVTRLYEFSDNELLVH 118


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 82   RNNGSPA*TLESQETSYCECD 20
            +NN S   + ES E S  ECD
Sbjct: 1869 QNNSSFNDSKESNEISEAECD 1889


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = -2

Query: 124 QSCR-CRHTFSCH 89
           Q C  CR  FSC+
Sbjct: 6   QECPYCRRNFSCY 18


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +2

Query: 149 YGEYNDYSHVA 181
           YG+ +++ HVA
Sbjct: 361 YGDLHNFGHVA 371


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,439
Number of Sequences: 438
Number of extensions: 605
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 43
effective length of database: 127,509
effective search space used:  2550180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)