Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S13A01NGRL0001_A14
(488 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 42 3e-06
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 35 4e-04
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 32 0.003
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 25 0.57
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 1.3
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 3.1
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 42.3 bits (95), Expect = 3e-06
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 4/136 (2%)
Frame = +3
Query: 30 GEQPNVSSECLIEGNDQGVKYSWQKDGKSFNWQEHNAALR-KDEGSLVFLRP-QASDEGQ 203
GE N+ +C++ D + W G+ A + D S++ + A G+
Sbjct: 598 GEFANL--QCIVPTGDLPLNIRWSYPGEEMGGSSGVLAKKVADRVSMLMISVITARHAGE 655
Query: 204 YQCFAETPAGVAS-SRVISFR-KTYLIASPAKTHEKTPIEGRPFQLDCVQPNAYPKPLIT 377
Y C AE AG AS S ++ I P +K +G +++C + + +PKP +T
Sbjct: 656 YVCTAENAAGTASHSTTLTVNVPPRWILEPT---DKAFAQGSDARVEC-KADGFPKPQVT 711
Query: 378 WKKRLSGADPNADVTD 425
WKK + D D TD
Sbjct: 712 WKK--AAGDTPGDYTD 725
Score = 32.3 bits (70), Expect = 0.003
Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 6/116 (5%)
Frame = +3
Query: 159 GSLVFLRPQASDEGQ------YQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEG 320
G+LVF +A D Q Y C A +PAG SR ++ R +++ I G
Sbjct: 58 GNLVFPPFRAEDYRQEVHAQVYSCLARSPAGSVHSRDVNVRAVVAQYYDTDVNKEYAIRG 117
Query: 321 RPFQLDCVQPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKE 488
L CV P+ + + D+D + P G L+ V E
Sbjct: 118 NSAILKCVVPSFVADFVKVLSWHTDQGEEFVPGDDYDGKYLVLPSGELHIRDVGPE 173
Score = 31.9 bits (69), Expect = 0.004
Identities = 26/95 (27%), Positives = 35/95 (36%), Gaps = 1/95 (1%)
Frame = +3
Query: 135 NAALRKDEGSLVFLRPQASDEGQYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPI 314
N + ++G+L Q ++EG Y C A G S VI K +T
Sbjct: 730 NPDISVEDGTLSINNIQKTNEGYYLCEAVNGIGAGLSAVIFISVQAPPHFEIKLKNQTAR 789
Query: 315 EGRPFQLDCVQPNAYPKPL-ITWKKRLSGADPNAD 416
G P L C KP+ I W DP +D
Sbjct: 790 RGEPAVLQCEAQG--EKPIGILWNMNNKRLDPKSD 822
Score = 30.3 bits (65), Expect = 0.012
Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Frame = +3
Query: 57 CLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDEGSLVFLRPQASDEGQYQCFAETPAGV 236
C + GN SW KDGK +E A LR + + D+G YQCF
Sbjct: 329 CNVRGNPIKT-VSWLKDGKPLGLEE--AVLRIES-------VKKEDKGMYQCFVRNDQ-- 376
Query: 237 ASSRVISFRKTYLIASPAKTH----EKTPIEGRPFQLDCVQPNAYPKPLITWK---KRLS 395
S++ + K P + E+T G L CV + P P ITW+ KRLS
Sbjct: 377 ESAQATAELKLGGRFEPPQIRQAFAEETLQPGPSMFLKCV-ASGNPTPEITWELDGKRLS 435
Query: 396 GAD 404
+
Sbjct: 436 NTE 438
Score = 29.5 bits (63), Expect = 0.020
Identities = 19/84 (22%), Positives = 32/84 (38%)
Frame = +3
Query: 135 NAALRKDEGSLVFLRPQASDEGQYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPI 314
N +R+ G+L+ + D G+Y C G S + T + + + +T
Sbjct: 262 NERVRQVSGTLIIREARVEDSGKYLCIVNNSVGGESVETV-LTVTAPLGAEIEPSTQTID 320
Query: 315 EGRPFQLDCVQPNAYPKPLITWKK 386
GRP C P ++W K
Sbjct: 321 FGRPATFTC-NVRGNPIKTVSWLK 343
Score = 25.8 bits (54), Expect = 0.25
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 156 EGSLVFLRPQASDEGQYQCFAETPAG 233
EGSL +D G+Y C+ E G
Sbjct: 1328 EGSLFIKEVDRTDAGEYSCYVENTFG 1353
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 35.1 bits (77), Expect = 4e-04
Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 4/114 (3%)
Frame = +3
Query: 57 CLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDE-GSLVFLRPQASD-EGQYQCFAETPA 230
C + D + SW KDG++ E D+ S++ + + D G Y C A A
Sbjct: 632 CSVTRGDLPLSISWLKDGRAMGPSERVHVTNMDQYNSILMIEHLSPDHNGNYSCVARNLA 691
Query: 231 GVAS--SRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVQPNAYPKPLITWKK 386
S R++ I P + + L C Q P P I WKK
Sbjct: 692 AEVSHTQRLVVHVPPRWIVEPTDVSVE---RNKHVALHC-QAQGVPTPTIVWKK 741
Score = 32.3 bits (70), Expect = 0.003
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +3
Query: 192 DEGQYQCFAETPAG--VASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVQPNAYPK 365
D G+Y C AE AG ++R+ + Y+ P + T + G +L C YP
Sbjct: 493 DGGEYSCMAENRAGKVTHAARLNVYGLPYIRLIP----KVTAVAGETLRLKC-PVAGYPI 547
Query: 366 PLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKE 488
I W++ N ++ D D R PDG L T V K+
Sbjct: 548 EEIKWER------ANRELPD-DLRQKVLPDGTLVITSVQKK 581
Score = 24.6 bits (51), Expect = 0.57
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 192 DEGQYQCFAETPAGVASSRV 251
D G Y+C A P G AS+ +
Sbjct: 304 DNGIYRCSASNPGGEASAEI 323
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 32.3 bits (70), Expect = 0.003
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +3
Query: 192 DEGQYQCFAETPAG--VASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVQPNAYPK 365
D G+Y C AE AG ++R+ + Y+ P + T + G +L C YP
Sbjct: 493 DGGEYSCMAENRAGKVTHAARLNVYGLPYIRLIP----KVTAVAGETLRLKC-PVAGYPI 547
Query: 366 PLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKE 488
I W++ N ++ D D R PDG L T V K+
Sbjct: 548 EEIKWER------ANRELPD-DLRQKVLPDGTLVITSVQKK 581
Score = 31.9 bits (69), Expect = 0.004
Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 9/119 (7%)
Frame = +3
Query: 57 CLIEGNDQGVKYSWQKDGKS-F----NWQEHNAALRKDEGSLVFLRPQASD-EGQYQCFA 218
C + D + SW KDG+S F N N + SL+ + A++ G Y C A
Sbjct: 632 CGVAAGDPPLTISWLKDGQSPFPLPPNLASANISQLDPYSSLLSITNLAAEHSGDYTCVA 691
Query: 219 ETPAGVASSRVISFRKTYLIASPAKTHEKTPI---EGRPFQLDCVQPNAYPKPLITWKK 386
PA + V K + P E T + + L C Q P P I WKK
Sbjct: 692 ANPA----AEVRYTAKLQVKVPPRWIVEPTDVSVERNKHVALHC-QAQGVPTPTIVWKK 745
Score = 24.6 bits (51), Expect = 0.57
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 192 DEGQYQCFAETPAGVASSRV 251
D G Y+C A P G AS+ +
Sbjct: 304 DNGIYRCSASNPGGEASAEI 323
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 24.6 bits (51), Expect = 0.57
Identities = 16/72 (22%), Positives = 27/72 (37%)
Frame = +3
Query: 42 NVSSECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDEGSLVFLRPQASDEGQYQCFAE 221
NV +C + G W+++G ++GSL + Q G Y C A
Sbjct: 327 NVEIKCDVTGTPPP-PLVWRRNGADLETLNEPEIRVFNDGSLYLTKVQLIHAGNYTCHAV 385
Query: 222 TPAGVASSRVIS 257
V + V++
Sbjct: 386 RNQDVVQTHVLT 397
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 23.4 bits (48), Expect = 1.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 207 GIGPRQTLAVSGIPGILHLCG 145
GIGP++ L GIP ++ L G
Sbjct: 334 GIGPKEHLRSLGIPVVVDLPG 354
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.2 bits (45), Expect = 3.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 244 ELATPAGVSAKHWYWPSSDACGLRNTRDPSSLRRAALC 131
EL+ P ++ + SSD C R + P+ ++ LC
Sbjct: 154 ELSQPGSLNG----YGSSDGCDARKKKGPTPRQQEELC 187
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,578
Number of Sequences: 438
Number of extensions: 3218
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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