Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S13A01NGRL0001_A12
         (257 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46686-1|AAC47040.1|  576|Drosophila melanogaster DEAF-1 protein.      26   8.4  
BT004907-1|AAO49160.1|  573|Drosophila melanogaster LD06278p pro...    26   8.4  
AE014296-3227|ABC66130.1|  573|Drosophila melanogaster CG8567-PB...    26   8.4  
AE014296-3226|AAF49105.1|  576|Drosophila melanogaster CG8567-PA...    26   8.4  

>U46686-1|AAC47040.1|  576|Drosophila melanogaster DEAF-1 protein.
          Length = 576

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 150 GRCVRGPNKWYMSAVFNYYC 209
           GRCV+  +KW+  + F + C
Sbjct: 243 GRCVKYKDKWHTPSEFEHVC 262


>BT004907-1|AAO49160.1|  573|Drosophila melanogaster LD06278p
           protein.
          Length = 573

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 150 GRCVRGPNKWYMSAVFNYYC 209
           GRCV+  +KW+  + F + C
Sbjct: 243 GRCVKYKDKWHTPSEFEHVC 262


>AE014296-3227|ABC66130.1|  573|Drosophila melanogaster CG8567-PB,
           isoform B protein.
          Length = 573

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 150 GRCVRGPNKWYMSAVFNYYC 209
           GRCV+  +KW+  + F + C
Sbjct: 243 GRCVKYKDKWHTPSEFEHVC 262


>AE014296-3226|AAF49105.1|  576|Drosophila melanogaster CG8567-PA,
           isoform A protein.
          Length = 576

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 150 GRCVRGPNKWYMSAVFNYYC 209
           GRCV+  +KW+  + F + C
Sbjct: 243 GRCVKYKDKWHTPSEFEHVC 262


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,257,071
Number of Sequences: 53049
Number of extensions: 64676
Number of successful extensions: 44
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 24,988,368
effective HSP length: 64
effective length of database: 21,593,232
effective search space used: 453457872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)