Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S13A01NGRL0001_A07
(539 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 39 3e-05
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 32 0.004
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 27 0.12
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 1.5
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 1.5
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 3.5
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 21 6.1
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 8.1
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 8.1
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 39.1 bits (87), Expect = 3e-05
Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 8/126 (6%)
Frame = +1
Query: 106 LKDQPAEVLFKENNPTVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRK--DEGSLVF 279
+K+ P V F V+EC GN Q + DG + LR+ G+LVF
Sbjct: 6 VKEPPNRVDFSNGTGAVVECQARGNPQPDIIWVRADGSAVG---DVPGLRQVLPNGNLVF 62
Query: 280 LRPQASDEGQ------YQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQL 441
+A D Q Y C A +PAG SR ++ R +++ I G L
Sbjct: 63 PPFRAEDYRQEVHAQVYSCLARSPAGSVHSRDVNVRAVVAQYYDTDVNKEYAIRGNSAIL 122
Query: 442 DCVQPN 459
CV P+
Sbjct: 123 KCVVPS 128
Score = 31.9 bits (69), Expect = 0.004
Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 5/128 (3%)
Frame = +1
Query: 115 QPAEVLFKENNPTVLECLIEGNDQGVKYSWQK-----DGKSFNWQEHNAALRKDEGSLVF 279
+P + F + + +EC +G + + +W+K G + + N + ++G+L
Sbjct: 684 EPTDKAFAQGSDARVECKADGFPKP-QVTWKKAAGDTPGDYTDLKLSNPDISVEDGTLSI 742
Query: 280 LRPQASDEGQYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVQPN 459
Q ++EG Y C A G S VI K +T G P L C
Sbjct: 743 NNIQKTNEGYYLCEAVNGIGAGLSAVIFISVQAPPHFEIKLKNQTARRGEPAVLQCEAQG 802
Query: 460 AYPKPLIY 483
P +++
Sbjct: 803 EKPIGILW 810
Score = 29.9 bits (64), Expect = 0.017
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = +1
Query: 115 QPAEVLFKENNPTVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDEGSLVFLRPQA 294
+P+ P C + GN SW KDGK +E A LR + +
Sbjct: 313 EPSTQTIDFGRPATFTCNVRGNPIKT-VSWLKDGKPLGLEE--AVLRIES-------VKK 362
Query: 295 SDEGQYQCF 321
D+G YQCF
Sbjct: 363 EDKGMYQCF 371
Score = 27.5 bits (58), Expect = 0.093
Identities = 16/69 (23%), Positives = 27/69 (39%)
Frame = +1
Query: 241 NAALRKDEGSLVFLRPQASDEGQYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPI 420
N +R+ G+L+ + D G+Y C G S + T + + + +T
Sbjct: 262 NERVRQVSGTLIIREARVEDSGKYLCIVNNSVGGESVETV-LTVTAPLGAEIEPSTQTID 320
Query: 421 EGRPFQLDC 447
GRP C
Sbjct: 321 FGRPATFTC 329
Score = 25.8 bits (54), Expect = 0.28
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 262 EGSLVFLRPQASDEGQYQCFAETPAG 339
EGSL +D G+Y C+ E G
Sbjct: 1328 EGSLFIKEVDRTDAGEYSCYVENTFG 1353
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 31.9 bits (69), Expect = 0.004
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +1
Query: 151 TVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDE-GSLVFLRPQASD-EGQYQCFA 324
T L C + D + SW KDG++ E D+ S++ + + D G Y C A
Sbjct: 628 TTLTCSVTRGDLPLSISWLKDGRAMGPSERVHVTNMDQYNSILMIEHLSPDHNGNYSCVA 687
Query: 325 ETPAGVAS 348
A S
Sbjct: 688 RNLAAEVS 695
Score = 26.2 bits (55), Expect = 0.21
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = +1
Query: 100 PVLKDQPAEVLFKENNPTVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDEGSLVF 279
PV+ + V ++ T L C+ + +Y W S + + GS++
Sbjct: 238 PVILENSGVVHVAQDESTSLVCVAQACPTP-EYRWYAQTGSEPMLVLSGPRTRLLGSVLA 296
Query: 280 LRPQA-SDEGQYQCFAETPAGVASSRV 357
L D G Y+C A P G AS+ +
Sbjct: 297 LEAVTLEDNGIYRCSASNPGGEASAEI 323
Score = 23.0 bits (47), Expect = 2.0
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +1
Query: 298 DEGQYQCFAETPAG--VASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDC 447
D G+Y C AE AG ++R+ + Y+ P + T + G +L C
Sbjct: 493 DGGEYSCMAENRAGKVTHAARLNVYGLPYIRLIP----KVTAVAGETLRLKC 540
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 27.1 bits (57), Expect = 0.12
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Frame = +1
Query: 100 PVLKDQPAEVLFKENNPTVLECLIEGNDQGVKYSWQKDGKS-F----NWQEHNAALRKDE 264
P+++ + E T C + D + SW KDG+S F N N +
Sbjct: 611 PIIEPFTFQEGLSEGMRTRTVCGVAAGDPPLTISWLKDGQSPFPLPPNLASANISQLDPY 670
Query: 265 GSLVFLRPQASD-EGQYQCFAETPA 336
SL+ + A++ G Y C A PA
Sbjct: 671 SSLLSITNLAAEHSGDYTCVAANPA 695
Score = 26.2 bits (55), Expect = 0.21
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = +1
Query: 100 PVLKDQPAEVLFKENNPTVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDEGSLVF 279
PV+ + V ++ T L C+ + +Y W S + + GS++
Sbjct: 238 PVILENSGVVHVAQDESTSLVCVAQACPTP-EYRWYAQTGSEPMLVLSGPRTRLLGSVLA 296
Query: 280 LRPQA-SDEGQYQCFAETPAGVASSRV 357
L D G Y+C A P G AS+ +
Sbjct: 297 LEAVTLEDNGIYRCSASNPGGEASAEI 323
Score = 23.0 bits (47), Expect = 2.0
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +1
Query: 298 DEGQYQCFAETPAG--VASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDC 447
D G+Y C AE AG ++R+ + Y+ P + T + G +L C
Sbjct: 493 DGGEYSCMAENRAGKVTHAARLNVYGLPYIRLIP----KVTAVAGETLRLKC 540
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 1.5
Identities = 12/54 (22%), Positives = 21/54 (38%)
Frame = +1
Query: 202 WQKDGKSFNWQEHNAALRKDEGSLVFLRPQASDEGQYQCFAETPAGVASSRVIS 363
W+++G ++GSL + Q G Y C A V + V++
Sbjct: 344 WRRNGADLETLNEPEIRVFNDGSLYLTKVQLIHAGNYTCHAVRNQDVVQTHVLT 397
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 23.4 bits (48), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 313 GIGPRQTLAVSGIPGILHLCG 251
GIGP++ L GIP ++ L G
Sbjct: 334 GIGPKEHLRSLGIPVVVDLPG 354
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.2 bits (45), Expect = 3.5
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -1
Query: 350 ELATPAGVSAKHWYWPSSDACGLRNTRDPSSLRRAALC 237
EL+ P ++ + SSD C R + P+ ++ LC
Sbjct: 154 ELSQPGSLNG----YGSSDGCDARKKKGPTPRQQEELC 187
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.4 bits (43), Expect = 6.1
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +1
Query: 64 IIVGSALPVDKYPVLKDQPAEVLFKENNPT 153
+++G+ +DK+ A + K+N PT
Sbjct: 203 VLIGAPNEIDKFYGTPGYTAPEVIKQNRPT 232
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.0 bits (42), Expect = 8.1
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -2
Query: 142 SP*RGPRPVGLSAPGIYPREALSPQ 68
SP P G S P +YP SPQ
Sbjct: 380 SPYGYPIGSGGSFPSLYPMATTSPQ 404
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.0 bits (42), Expect = 8.1
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 439 LDCVQPNAYPKPLIY 483
+DCV N Y L+Y
Sbjct: 19 IDCVDANWYKNALVY 33
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,470
Number of Sequences: 438
Number of extensions: 3440
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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