Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S13A01NGRL0001_A04
(544 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 33 0.18
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 33 0.18
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 32 0.23
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 32 0.23
Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical pr... 32 0.31
AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger p... 32 0.31
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 31 0.54
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 31 0.54
Z36753-12|CAE17919.1| 92|Caenorhabditis elegans Hypothetical p... 29 2.9
AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical ... 29 2.9
Z46343-4|CAA86460.1| 336|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z35719-2|CAA84799.2| 715|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF116529-1|AAD05570.1| 961|Caenorhabditis elegans synthetic mul... 28 5.0
AF000195-1|AAC24266.2| 961|Caenorhabditis elegans Abnormal cell... 28 5.0
U80033-4|AAC48198.2| 467|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF040649-2|AAB95004.2| 324|Caenorhabditis elegans Serpentine re... 27 8.7
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 32.7 bits (71), Expect = 0.18
Identities = 26/115 (22%), Positives = 49/115 (42%)
Frame = +1
Query: 178 GNLAYSVNDLGYKILIQKMQQNKNENIVISPXXXXXXXXXXXXXSVGNTYDELASALGFS 357
G L +S D G +L QQN E+ V SP + G T DE+ AL
Sbjct: 11 GLLLHSETDFGLSLL---RQQNLTESFVFSPLSIALALSLVHVAAKGETRDEIRKAL--- 64
Query: 358 QDVLANRQSHEYFSELIHNLNSNDTMSKTLYANAVFVDIHSKLRDVFQDYLTRIY 522
+ + + ++FS + L + ++ AN +F ++ ++ + + ++Y
Sbjct: 65 LNGATDEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLY 119
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 32.7 bits (71), Expect = 0.18
Identities = 26/115 (22%), Positives = 49/115 (42%)
Frame = +1
Query: 178 GNLAYSVNDLGYKILIQKMQQNKNENIVISPXXXXXXXXXXXXXSVGNTYDELASALGFS 357
G L +S D G +L QQN E+ V SP + G T DE+ AL
Sbjct: 11 GLLLHSETDFGLSLL---RQQNLTESFVFSPLSIALALSLVHVAAKGETRDEIRKAL--- 64
Query: 358 QDVLANRQSHEYFSELIHNLNSNDTMSKTLYANAVFVDIHSKLRDVFQDYLTRIY 522
+ + + ++FS + L + ++ AN +F ++ ++ + + ++Y
Sbjct: 65 LNGATDEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLY 119
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 32.3 bits (70), Expect = 0.23
Identities = 25/91 (27%), Positives = 39/91 (42%)
Frame = +1
Query: 253 NIVISPXXXXXXXXXXXXXSVGNTYDELASALGFSQDVLANRQSHEYFSELIHNLNSNDT 432
++V+SP + G+T EL +DVL + E FS L+ + D
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKEL-------EDVLGGSRIFEEFSGLMEAVGDTDN 76
Query: 433 MSKTLYANAVFVDIHSKLRDVFQDYLTRIYK 525
+T N VFV ++ + QDYL + K
Sbjct: 77 GVETKIVNRVFV---NQAYTIHQDYLETVEK 104
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 32.3 bits (70), Expect = 0.23
Identities = 25/91 (27%), Positives = 39/91 (42%)
Frame = +1
Query: 253 NIVISPXXXXXXXXXXXXXSVGNTYDELASALGFSQDVLANRQSHEYFSELIHNLNSNDT 432
++V+SP + G+T EL +DVL + E FS L+ + D
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKEL-------EDVLGGSRIFEEFSGLMEAVGDTDN 76
Query: 433 MSKTLYANAVFVDIHSKLRDVFQDYLTRIYK 525
+T N VFV ++ + QDYL + K
Sbjct: 77 GVETKIVNRVFV---NQAYTIHQDYLETVEK 104
>Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical
protein F58E6.1b protein.
Length = 764
Score = 31.9 bits (69), Expect = 0.31
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 388 EYFSELIHNLNSNDTMSKTLYANAVFVDIHSKLRDVFQDYL 510
EYF EL+ S K Y N F ++HSK+R++ +L
Sbjct: 260 EYFGELLQQTLSGLDYLKQYYPNVGFEEVHSKVRNLTHYFL 300
>Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical
protein F58E6.1a protein.
Length = 966
Score = 31.9 bits (69), Expect = 0.31
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 388 EYFSELIHNLNSNDTMSKTLYANAVFVDIHSKLRDVFQDYL 510
EYF EL+ S K Y N F ++HSK+R++ +L
Sbjct: 260 EYFGELLQQTLSGLDYLKQYYPNVGFEEVHSKVRNLTHYFL 300
>AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger
protein STAT-B protein.
Length = 810
Score = 31.9 bits (69), Expect = 0.31
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 388 EYFSELIHNLNSNDTMSKTLYANAVFVDIHSKLRDVFQDYL 510
EYF EL+ S K Y N F ++HSK+R++ +L
Sbjct: 306 EYFGELLQQTLSGLDYLKQYYPNVGFEEVHSKVRNLTHYFL 346
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 31.1 bits (67), Expect = 0.54
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 1/115 (0%)
Frame = +1
Query: 181 NLAYSVNDLGYKILIQKMQQNKNENIVISPXXXXXXXXXXXXXSVGNT-YDELASALGFS 357
N ++ G K+L + ++ V SP + G+T +D S + S
Sbjct: 7 NSTFTEAQFGIKLL-SDLTSDQLTPCVFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGS 65
Query: 358 QDVLANRQSHEYFSELIHNLNSNDTMSKTLYANAVFVDIHSKLRDVFQDYLTRIY 522
D Q E+FS + LNS+ +TL AN +FV +R F D L Y
Sbjct: 66 TD----EQFIEHFSFINKLLNSSVNDVETLIANRLFVSPEQAIRKAFTDELREHY 116
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 31.1 bits (67), Expect = 0.54
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 1/115 (0%)
Frame = +1
Query: 181 NLAYSVNDLGYKILIQKMQQNKNENIVISPXXXXXXXXXXXXXSVGNT-YDELASALGFS 357
N ++ G K+L + ++ V SP + G+T +D S + S
Sbjct: 7 NSTFTEAQFGIKLL-SDLTSDQLTPCVFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGS 65
Query: 358 QDVLANRQSHEYFSELIHNLNSNDTMSKTLYANAVFVDIHSKLRDVFQDYLTRIY 522
D Q E+FS + LNS+ +TL AN +FV +R F D L Y
Sbjct: 66 TD----EQFIEHFSFINKLLNSSVNDVETLIANRLFVSPEQAIRKAFTDELREHY 116
>Z36753-12|CAE17919.1| 92|Caenorhabditis elegans Hypothetical
protein T09A5.15 protein.
Length = 92
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = -3
Query: 311 LPRRVNANKPAIPVGEITMFSFLFCCIFCIKILYPKSFTEYAK 183
LP+ N+P + + + + CC LYPK +Y K
Sbjct: 19 LPKWAKVNRPTLGSMAVVATALVTCCAVAAVTLYPKYHHDYYK 61
>AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical
protein Y54E10BR.8 protein.
Length = 419
Score = 28.7 bits (61), Expect = 2.9
Identities = 20/93 (21%), Positives = 35/93 (37%)
Frame = +1
Query: 235 QQNKNENIVISPXXXXXXXXXXXXXSVGNTYDELASALGFSQDVLANRQSHEYFSELIHN 414
Q + + V+ P G+ YDE+ G +D E ELI +
Sbjct: 96 QDSSTQMTVLQPMMQQGTAQMILLPPEGSQYDEIVDHRGPDEDDFGVLDDDENIEELIDD 155
Query: 415 LNSNDTMSKTLYANAVFVDIHSKLRDVFQDYLT 513
+ +D + + N VF+ H + +D L+
Sbjct: 156 DDDDDYIDE--LGNPVFIGAHDDSDYILEDDLS 186
>Z46343-4|CAA86460.1| 336|Caenorhabditis elegans Hypothetical
protein T23F11.5 protein.
Length = 336
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 407 YITLTATTLCRRHFTPMLYLSTY--TASYAMCFKTISLEF 520
Y+TL L FTP ++L + + Y+ FKT+S F
Sbjct: 95 YVTLLCPILAPYFFTPSIFLKIFFTLSHYSQGFKTVSQVF 134
>Z35719-2|CAA84799.2| 715|Caenorhabditis elegans Hypothetical
protein F17C8.3 protein.
Length = 715
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -3
Query: 365 TSWEKPRALASSS*VFPTLPRRVNANKPAIPVGEITMFSFL 243
T W F + RR N KP G++T +SFL
Sbjct: 659 TDWHVVEVRVEGDDGFEVITRRNNPAKPGAVTGQLTYYSFL 699
>AF116529-1|AAD05570.1| 961|Caenorhabditis elegans synthetic
multivulva protein LIN-35 Rb protein.
Length = 961
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +1
Query: 418 NSND-TMSKTLYANAVFVDI-HSKLRDVFQDYLTRIYKGIAVN 540
NS D ++++ L A FV+I HS+ +Q+Y+ RI +G+AV+
Sbjct: 207 NSFDISVAEMLDKTARFVEIIHSRKIRRYQEYIRRIQEGLAVS 249
>AF000195-1|AAC24266.2| 961|Caenorhabditis elegans Abnormal cell
lineage protein 35 protein.
Length = 961
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +1
Query: 418 NSND-TMSKTLYANAVFVDI-HSKLRDVFQDYLTRIYKGIAVN 540
NS D ++++ L A FV+I HS+ +Q+Y+ RI +G+AV+
Sbjct: 207 NSFDISVAEMLDKTARFVEIIHSRKIRRYQEYIRRIQEGLAVS 249
>U80033-4|AAC48198.2| 467|Caenorhabditis elegans Hypothetical
protein T23H2.4 protein.
Length = 467
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 356 EKPRALASSS*VFPTLPRRVNANKPAIPVGEITMFS 249
EKP +LAS + P P V+A IP+ IT FS
Sbjct: 419 EKPSSLASPVGILPISPTLVSAR--GIPIFPITSFS 452
>AF040649-2|AAB95004.2| 324|Caenorhabditis elegans Serpentine
receptor, class i protein74 protein.
Length = 324
Score = 27.1 bits (57), Expect = 8.7
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = -3
Query: 224 IKILYPKSFTEYAKFPSFIM 165
IK +YPK + +++K P+F++
Sbjct: 166 IKEVYPKGYLQFSKLPNFVV 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,095,834
Number of Sequences: 27780
Number of extensions: 214088
Number of successful extensions: 612
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -