Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S13A01NGRL0001_A03
(492 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 30 1.0
AL132858-16|CAB60486.2| 538|Caenorhabditis elegans Hypothetical... 29 1.8
AL117207-25|CAB61042.2| 538|Caenorhabditis elegans Hypothetical... 29 1.8
AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical ... 29 1.8
AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical ... 29 1.8
Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical p... 28 4.2
Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 27 5.6
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 27 5.6
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 27 7.4
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 27 7.4
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 27 7.4
AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical ... 27 7.4
Z81134-4|CAB03451.1| 322|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z78200-3|CAB01580.1| 144|Caenorhabditis elegans Hypothetical pr... 27 9.8
U64854-4|AAB18314.1| 308|Caenorhabditis elegans Hypothetical pr... 27 9.8
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 27 9.8
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
F32H2.5 protein.
Length = 2586
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +3
Query: 231 IGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDTHIPGFGD 353
IG +DL+ LG A LDNV+ HG+ L P GD
Sbjct: 1832 IGKVDLSQNSSLGMAKL---LDNVSVHGILLDSIMDPTVGD 1869
>AL132858-16|CAB60486.2| 538|Caenorhabditis elegans Hypothetical
protein Y113G7A.5 protein.
Length = 538
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 436 IFLVAKAFAVMSWLSLW-KRFTLPAAVTLSPNPGMCVSVR 320
I+L ++SW+S W R +LPA VTL + M ++++
Sbjct: 304 IYLPTYCMVLISWISFWLDRRSLPARVTLGVSSLMALTLQ 343
>AL117207-25|CAB61042.2| 538|Caenorhabditis elegans Hypothetical
protein Y113G7A.5 protein.
Length = 538
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 436 IFLVAKAFAVMSWLSLW-KRFTLPAAVTLSPNPGMCVSVR 320
I+L ++SW+S W R +LPA VTL + M ++++
Sbjct: 304 IYLPTYCMVLISWISFWLDRRSLPARVTLGVSSLMALTLQ 343
>AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical
protein F22F7.1b protein.
Length = 392
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 183 GVKVPFAGNDKNIVSAIGSLDLTNRQ 260
GV VPF G DK+I++ D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262
>AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical
protein F22F7.1a protein.
Length = 426
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 183 GVKVPFAGNDKNIVSAIGSLDLTNRQ 260
GV VPF G DK+I++ D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262
>Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical
protein ZK262.11 protein.
Length = 338
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 454 TLAISGIFLVA-KAFAVMSWLSLWKRFTLP 368
TL I+GIF + SW+ LWK+F P
Sbjct: 112 TLGITGIFENRFRIICKFSWVPLWKKFITP 141
>Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical
protein C43D7.6 protein.
Length = 338
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 454 TLAISGIFLVA-KAFAVMSWLSLWKRFTLP 368
TL I+GIF + SW+ LWK+F P
Sbjct: 112 TLGITGIFENRFRIICKFSWVPLWKKFITP 141
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 27.5 bits (58), Expect = 5.6
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -3
Query: 295 SSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELS--VRAPCASLRTL 122
+SATPAV AP+ + V PI T+ + L P P E++ V AP + +
Sbjct: 534 TSATPAVTAPASIVPVTPTAPIVETLIVP-----PLPPVESNPEEVTPMVTAPISIHSSF 588
Query: 121 ELVNSSGSS 95
E ++S S
Sbjct: 589 ENISSDFES 597
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 27.5 bits (58), Expect = 5.6
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 79 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 219
T+ + LNY QA+ G TEL PL +L L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 27.5 bits (58), Expect = 5.6
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 79 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 219
T+ + LNY QA+ G TEL PL +L L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 358 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 230
T+SP P V TP T S +TP+V P+F V + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 358 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 230
T+SP P V TP T S +TP+V P+F V + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 358 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 230
T+SP P V TP T S +TP+V P+F V + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525
>AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical
protein Y51H7C.6a protein.
Length = 801
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 51 RYLIVSEPVYYIQHYEEPELLTSSRVRRDAHGAL 152
R L+ +EP+ + +Y+ LLTSS + R +L
Sbjct: 671 RLLVENEPLLFADNYQTLLLLTSSEIARQIEQSL 704
>Z81134-4|CAB03451.1| 322|Caenorhabditis elegans Hypothetical
protein T28D6.7 protein.
Length = 322
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 362 CHLVSEPGDVCIRETYSVAVYIIQCHSSGCSA*FL 258
CH P CIR T ++ Y+I+ GC ++
Sbjct: 188 CHEDYPPAKGCIRATVLISGYLIKEKEQGCEVIYI 222
>Z78200-3|CAB01580.1| 144|Caenorhabditis elegans Hypothetical
protein T04H1.3 protein.
Length = 144
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 345 FGDKVTAAGKVNLFHNDNHDITAKAFATRNMPDIA 449
+ D +T KVN++H+ N++ T N+PD A
Sbjct: 79 YTDILTLDPKVNIYHSCNYNGPCSKKVTINIPDYA 113
>U64854-4|AAB18314.1| 308|Caenorhabditis elegans Hypothetical
protein K11C4.1 protein.
Length = 308
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/38 (26%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -2
Query: 437 HISGGESLRCDVVVI-VVEEIHFAGSCHLVSEPGDVCI 327
H++ G ++ + + +EE+H+ G H +PG+ C+
Sbjct: 111 HLTLGSAIGASIQCLEALEELHWCGFLHRDVKPGNFCL 148
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 26.6 bits (56), Expect = 9.8
Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Frame = -3
Query: 355 LSPNPGMCVSVRLT--PWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTP 182
L+P P V RLT P P +++ + ++ P +T + P T P
Sbjct: 147 LAPVPKPVVVPRLTTLPTPAVITTEAKIFTTEAIATTPRAIPPAVVTTEATQPEVATTLP 206
Query: 181 APEVPSELSVRAP 143
P SE AP
Sbjct: 207 EPSTTSEPLTSAP 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,346,368
Number of Sequences: 27780
Number of extensions: 231207
Number of successful extensions: 643
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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