Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_P22
         (157 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U83596-1|AAC32727.1|  346|Drosophila melanogaster non-histone ch...    26   6.2  
AY058757-1|AAL13986.1|  346|Drosophila melanogaster SD02315p pro...    26   6.2  
AE014297-3009|AAF55895.1|  372|Drosophila melanogaster CG6570-PA...    26   6.2  
AE013599-2798|AAF57616.1|  346|Drosophila melanogaster CG18608-P...    26   6.2  

>U83596-1|AAC32727.1|  346|Drosophila melanogaster non-histone
           chromosomal proteinProd protein.
          Length = 346

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 72  VTPEDW*ERSKRWQNSRQRCQXGRLALN 155
           +TPE+W +R   W+N+  RC+  R  L+
Sbjct: 64  LTPEEWRKRLNDWKNT-TRCKYRRSLLS 90


>AY058757-1|AAL13986.1|  346|Drosophila melanogaster SD02315p
           protein.
          Length = 346

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 72  VTPEDW*ERSKRWQNSRQRCQXGRLALN 155
           +TPE+W +R   W+N+  RC+  R  L+
Sbjct: 64  LTPEEWRKRLNDWKNT-TRCKYRRSLLS 90


>AE014297-3009|AAF55895.1|  372|Drosophila melanogaster CG6570-PA
           protein.
          Length = 372

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -3

Query: 143 SSSLAPLPRILPPFTPFL 90
           S SLAP P  LPP TP L
Sbjct: 346 SQSLAPQPPTLPPATPAL 363


>AE013599-2798|AAF57616.1|  346|Drosophila melanogaster CG18608-PA
           protein.
          Length = 346

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 72  VTPEDW*ERSKRWQNSRQRCQXGRLALN 155
           +TPE+W +R   W+N+  RC+  R  L+
Sbjct: 64  LTPEEWRKRLNDWKNT-TRCKYRRSLLS 90


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,292,243
Number of Sequences: 53049
Number of extensions: 81942
Number of successful extensions: 243
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 24,988,368
effective HSP length: 32
effective length of database: 23,290,800
effective search space used: 442525200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)