Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_P19
(282 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 94 5e-19
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 89 1e-17
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 81 5e-15
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 75 2e-13
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 72 3e-12
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 69 2e-11
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 69 2e-11
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 63 1e-09
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 62 3e-09
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 58 5e-08
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 56 2e-07
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 54 5e-07
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 52 2e-06
UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila melanogaster|... 52 2e-06
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 50 1e-05
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 50 1e-05
UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S riboso... 46 2e-04
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 42 0.003
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 41 0.006
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 38 0.033
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 37 0.075
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 36 0.23
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 35 0.30
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 34 0.70
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 34 0.70
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 33 1.2
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 33 1.2
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 33 1.6
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 33 1.6
UniRef50_Q03T68 Cluster: Putative uncharacterized protein; n=1; ... 32 2.8
UniRef50_Q8SZ38 Cluster: RE18076p; n=1; Drosophila melanogaster|... 31 3.7
UniRef50_P59077 Cluster: Methionyl-tRNA synthetase; n=10; Chloro... 31 4.9
UniRef50_Q933M2 Cluster: Ysp1; n=3; Yersinia enterocolitica|Rep:... 30 8.6
UniRef50_Q4UE91 Cluster: Putative uncharacterized protein; n=3; ... 30 8.6
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 94.3 bits (224), Expect = 5e-19
Identities = 41/66 (62%), Positives = 53/66 (80%)
Frame = +2
Query: 83 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVL 262
MSG LD+L + EEDV K LAA THLG N++FQME Y+YK + DG ++INL+RTWE+L+L
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 263 ADRAVV 280
A RA+V
Sbjct: 61 AARAIV 66
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 89.4 bits (212), Expect = 1e-17
Identities = 38/65 (58%), Positives = 53/65 (81%)
Frame = +2
Query: 83 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVL 262
MSGGL++L++ E+DVTK+LAA THLG NV+ QM YV+K +GDG +IN+R+TWE+L+L
Sbjct: 1 MSGGLEVLSMKEDDVTKLLAAGTHLGDSNVDIQMAQYVFKTKGDGVPIINVRKTWEKLLL 60
Query: 263 ADRAV 277
A R +
Sbjct: 61 AARVI 65
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 81.0 bits (191), Expect = 5e-15
Identities = 33/65 (50%), Positives = 48/65 (73%)
Frame = +2
Query: 83 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVL 262
MSGG++ L L E+D+ M+AA HLG+ N N+QM+ YVY +G H+I+L +TWE+L+L
Sbjct: 1 MSGGIEALELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLL 60
Query: 263 ADRAV 277
A RA+
Sbjct: 61 AARAI 65
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 75.4 bits (177), Expect = 2e-13
Identities = 32/59 (54%), Positives = 44/59 (74%)
Frame = +2
Query: 104 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVLADRAVV 280
++ E D+ MLAA HLG +NV+FQME YV+K R DG H+INL +TW++L+LA R +V
Sbjct: 31 MSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIV 89
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 71.7 bits (168), Expect = 3e-12
Identities = 28/63 (44%), Positives = 47/63 (74%)
Frame = +2
Query: 89 GGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVLAD 268
G ++L ++ED+ ++LAA H+G++N+ +M+ YV+K R DG H++NL +TWE+LVLA
Sbjct: 5 GRPNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAA 64
Query: 269 RAV 277
R +
Sbjct: 65 RVI 67
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 69.3 bits (162), Expect = 2e-11
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = +2
Query: 104 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVLADRAVV 280
L+ E DV M AA HLG +N N+QME YV+K R DG ++ NL +TWE+L +A R +V
Sbjct: 12 LSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV 70
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 69.3 bits (162), Expect = 2e-11
Identities = 31/56 (55%), Positives = 38/56 (67%)
Frame = +2
Query: 110 LSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVLADRAV 277
L+ ED +LAA THLGA NV E YV+ R DG HVIN+ +TWE+LVLA R +
Sbjct: 9 LTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARII 64
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 63.3 bits (147), Expect = 1e-09
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = +2
Query: 110 LSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVLADRAVV 280
L E DV KML ATTHLG N++ +M+ Y++ + DGT V NL++ W ++V A R +V
Sbjct: 15 LKEADVKKMLVATTHLGVRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILV 71
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 61.7 bits (143), Expect = 3e-09
Identities = 27/60 (45%), Positives = 38/60 (63%)
Frame = +2
Query: 98 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVLADRAV 277
D+L S ED+ M+A H+GA N+NF ME YVY+ + + NL +TWE+L LA R +
Sbjct: 15 DILKPSAEDIKMMVACRVHIGATNLNFAMEEYVYERGNNNECIFNLMKTWEKLSLAARVI 74
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 57.6 bits (133), Expect = 5e-08
Identities = 26/52 (50%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +2
Query: 83 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGT-HVINL 235
MSGGL+ LAL E+DV K LA+ H+G+ N++++M Y+YK + DG H I L
Sbjct: 1 MSGGLECLALKEDDVQKFLASGAHIGSSNMDYKMAPYIYKRKPDGNIHSIGL 52
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 56.0 bits (129), Expect = 2e-07
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +2
Query: 107 ALSEEDVTKM-LAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVLADRAV 277
A E V KM LAA +LG+ N++F M+ YV+ R DGTHVINL T+E++ LA R +
Sbjct: 6 AADREAVIKMMLAAKVYLGSTNLSFGMKPYVFTCRKDGTHVINLAMTYEKIKLAARMI 63
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 54.4 bits (125), Expect = 5e-07
Identities = 26/66 (39%), Positives = 37/66 (56%)
Frame = +2
Query: 83 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVL 262
M+ L E+ + ML A H+G +NV +M YVY +G H+INL T E+L +
Sbjct: 1 MAAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKV 60
Query: 263 ADRAVV 280
A RA+V
Sbjct: 61 AARAIV 66
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 52.4 bits (120), Expect = 2e-06
Identities = 18/60 (30%), Positives = 39/60 (65%)
Frame = +2
Query: 98 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVLADRAV 277
D ++ E+D+ +++A+ H+G + ++F M+ YV +G++++NL TW+ + LA R +
Sbjct: 31 DCMSRKEQDIKRLIASQCHVGTKQLHFDMKRYVSHRSDNGSYILNLEETWQHIKLAARVI 90
>UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila
melanogaster|Rep: GM15484p - Drosophila melanogaster
(Fruit fly)
Length = 92
Score = 52.0 bits (119), Expect = 2e-06
Identities = 29/72 (40%), Positives = 34/72 (47%)
Frame = -1
Query: 249 SHVRRRLITCVPSPRPL*TYVSIWKLTFSAPKWXXXXXXXXXXXXXXXXXSNPPDIVAFV 70
S V RL PS R L TY SIWKLTFS P+W S PPD++ +
Sbjct: 22 SQVLPRLRMLTPSARRLYTYCSIWKLTFSEPRWVVATNILVMSSSLRDRISKPPDMLTWK 81
Query: 69 RVTTKRV*CHWE 34
+ T R C WE
Sbjct: 82 ELRTSR--CRWE 91
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 49.6 bits (113), Expect = 1e-05
Identities = 20/56 (35%), Positives = 35/56 (62%)
Frame = +2
Query: 113 SEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVLADRAVV 280
+E D+ K+L H+G M+ YV+K R DG ++IN+ +T +++ LA RA++
Sbjct: 4 NENDIKKLLICNVHIGLSACTQLMKVYVWKKRSDGIYIINILKTIQKIELAARAII 59
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 49.6 bits (113), Expect = 1e-05
Identities = 20/52 (38%), Positives = 34/52 (65%)
Frame = +2
Query: 122 DVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVLADRAV 277
DV K++A H G +N + M+ Y++ +GT++I+L TWE+L+LA R +
Sbjct: 34 DVQKLVAMHCHFGTKNRSNAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVI 85
>UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1; Homo
sapiens|Rep: PREDICTED: similar to 40S ribosomal protein
SA (p40) (34/67 kDa laminin receptor) - Homo sapiens
Length = 99
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +2
Query: 83 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKG 205
MSG LD+L + E+D+ +LAA THLG+ N++FQM + G
Sbjct: 1 MSGILDILPMKEDDILNLLAAGTHLGSPNLDFQMGQHKNSG 41
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 41.9 bits (94), Expect = 0.003
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 98 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKGR-GDGTHVINLRRTWERLVLADRA 274
D + + +E V ++ + +HLG + N Y+Y R D ++I++ TWE+L++A RA
Sbjct: 10 DSIKIPDEFVKLLIVSQSHLGGTSTNKSFARYLYGTRPRDRINIIDINATWEKLIIAARA 69
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 40.7 bits (91), Expect = 0.006
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 137 LAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVLA 265
LA+ H+G + ME ++Y+ R DG +V+++R+T ERL +A
Sbjct: 14 LASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIA 56
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 38.3 bits (85), Expect = 0.033
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +2
Query: 125 VTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVLA 265
V L+A H+G + ME++VY+ R +G +V+++R+ ERL +A
Sbjct: 39 VDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIA 85
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 37.1 bits (82), Expect = 0.075
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +2
Query: 125 VTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVLADR 271
+ + LAA H+G + M +VY+ R DG +V++++ T ER+ +A +
Sbjct: 40 IDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVASK 88
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 35.5 bits (78), Expect = 0.23
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +2
Query: 134 MLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLV 259
+L A THLG N +F+M +YK +G ++NL R++E+L+
Sbjct: 1 LLVAGTHLGDTNPDFKMIHSIYKRETNG--ILNLERSYEKLL 40
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 35.1 bits (77), Expect = 0.30
Identities = 14/56 (25%), Positives = 35/56 (62%)
Frame = +2
Query: 104 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVLADR 271
+ + EE+ K + H+G + + M+ Y++K R DG +++++++T +L++A +
Sbjct: 5 MLIPEEEYQK---SGVHIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGK 57
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 33.9 bits (74), Expect = 0.70
Identities = 23/61 (37%), Positives = 30/61 (49%)
Frame = +2
Query: 80 TMSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLV 259
TM G D+L ++EEDV K LAA TH +E + VI+ R T +R V
Sbjct: 110 TMFGAPDVLQMNEEDVLKFLAARTH--SEKLLLAARAIAAIENLADVSVISSRNTGQRAV 167
Query: 260 L 262
L
Sbjct: 168 L 168
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 33.9 bits (74), Expect = 0.70
Identities = 14/47 (29%), Positives = 30/47 (63%)
Frame = +2
Query: 137 LAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVLADRAV 277
LAA +G + + ME ++Y R DG +++++++T ER+ +A + +
Sbjct: 21 LAAGIRIGTKMKSKFMEPFIYSARPDGLYLLDVKKTDERIRIAAKMI 67
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 143 ATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVLADR 271
A H+G ++ M+ YV K R DG + ++R+ ERL LA +
Sbjct: 13 AGIHIGTRHLTKDMKPYVSKIREDGLAIFDIRKIDERLRLASK 55
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 125 VTKMLAATTHLGAENVN--FQMETYVYKGRGDGTHVINLRRTWERLVLADRAV 277
V + +AA LGA N Q +++ R DG + NL+R ER+ +A R +
Sbjct: 18 VERYMAAAVRLGARVSNNYLQERGFIFSVRPDGLRIFNLKRIDERIRIAARMI 70
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 152 HLGAENVNFQMETYVYKGRGDGTHVIN 232
HL N + Q++ YVYK + DG +VIN
Sbjct: 1 HLDGTNFDLQIDEYVYKKKRDGMYVIN 27
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 32.7 bits (71), Expect = 1.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 125 VTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERL 256
V L A H+G + ME ++++ R DG +V+++ T ER+
Sbjct: 82 VEDYLGAGVHIGTQQKTQDMERFIHRVRTDGLYVLDVSMTDERI 125
>UniRef50_Q03T68 Cluster: Putative uncharacterized protein; n=1;
Lactobacillus brevis ATCC 367|Rep: Putative
uncharacterized protein - Lactobacillus brevis (strain
ATCC 367 / JCM 1170)
Length = 153
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 104 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRT 244
LAL D+T AAT H G V T+ Y G+GD I +T
Sbjct: 15 LALGVTDLTSAQAATWHAGTPKV--MRHTWFYNGKGDNKAYITYTKT 59
>UniRef50_Q8SZ38 Cluster: RE18076p; n=1; Drosophila
melanogaster|Rep: RE18076p - Drosophila melanogaster
(Fruit fly)
Length = 528
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 277 NSTISEYKPFPCTPKINYVRTVTTAFINVRLHL 179
N S Y FP PK+ YV V T+ NV HL
Sbjct: 204 NQYPSIYNKFPSYPKVEYVSVVNTSDANVTQHL 236
>UniRef50_P59077 Cluster: Methionyl-tRNA synthetase; n=10;
Chlorobiaceae|Rep: Methionyl-tRNA synthetase -
Chlorobium tepidum
Length = 703
Score = 31.1 bits (67), Expect = 4.9
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 179 QMETYVYKGRGDG-THVINLRRTWERLVLADRAV 277
Q+E +V + GD ++V+N RTW LADRA+
Sbjct: 202 QLEAFVERHTGDWRSNVVNYSRTWLNQGLADRAI 235
>UniRef50_Q933M2 Cluster: Ysp1; n=3; Yersinia enterocolitica|Rep:
Ysp1 - Yersinia enterocolitica
Length = 676
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 50 TRLVVTLTNATMSGGLDL-LALSEEDVTKMLAATTHLGA 163
T +V+ +TNA +SGGL+L + D+ +M+A H A
Sbjct: 588 TNMVLGVTNAAVSGGLNLQVGAKTRDMKEMMAGMMHNNA 626
>UniRef50_Q4UE91 Cluster: Putative uncharacterized protein; n=3;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 926
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 41 WHYTRLVVTLTNATMSGGLDLLALSEEDVTKMLAATTH 154
W+Y L+VT +N + ++ ++L + + TK L+ T H
Sbjct: 203 WNYELLLVTFSNVILKNLVNAVSLDQSNRTKNLSETLH 240
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 292,237,330
Number of Sequences: 1657284
Number of extensions: 5286610
Number of successful extensions: 10553
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 10357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10551
length of database: 575,637,011
effective HSP length: 71
effective length of database: 457,969,847
effective search space used: 10075336634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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