Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_P19
         (282 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   0.47 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   0.82 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   1.9  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   3.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   3.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   5.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   5.8  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    20   5.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    19   7.7  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 0.47
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +2

Query: 83  MSGGLDLLALSEED---VTKMLAATTHLGAENVNFQMETY 193
           MSGG+  +A    D   +T  LAA+ HL +   +   +TY
Sbjct: 201 MSGGMHQMANYSTDYSSLTHSLAASNHLLSSGQHLLQDTY 240



 Score = 19.8 bits (39), Expect = 5.8
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +2

Query: 140 AATTHLGAENVNFQMETYVYKGRGDGTH 223
           AAT HLG+       E++ +      TH
Sbjct: 148 AATHHLGSVYSRHPYESWPFNTMSGATH 175


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 0.82
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 167  NVNFQMETYVYKGRGDGTHVINLRRTWERLVLADRA 274
            N NF +  ++ KG   G  V+ +    +   LAD A
Sbjct: 2541 NANFSLNYWIEKGADPGKIVMGMPLYGQSFSLADAA 2576



 Score = 20.2 bits (40), Expect = 4.4
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 260 VQAFPMYAED*LRAYRHHGLYKRTSPSG 177
           +QAF  + E    A  H  LY R   SG
Sbjct: 362 LQAFDFHREREPVADHHANLYSRPGDSG 389


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -2

Query: 212 HHGLYKRTSPSGN*HFPLPNGWSPQAS*SH 123
           HH      + +    FPL  G SP AS  H
Sbjct: 24  HHHEQSAAAAAAYRSFPLSLGMSPYASSQH 53


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 207 RPL*TYVSIWKLT 169
           +PL + V++WKLT
Sbjct: 2   KPLLSLVTLWKLT 14


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 146 TTHLGAENVNFQMETYVYKGRGDGT 220
           T  L   N N+   TY+ K  G G+
Sbjct: 272 TFTLSNSNTNYNPGTYINKEAGGGS 296


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 139 KHLSHIFLAERKQV 98
           KH+ +I L  RKQV
Sbjct: 275 KHIDNISLRARKQV 288


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 218 YRHHGLYKRTSPSGN*HFPLPNGWSPQ 138
           Y  HG ++RT    +  FPL +  S Q
Sbjct: 708 YDFHGQWERTVGHNSPLFPLESATSYQ 734


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 214 RYARN*SSAYMGKACTR*SCCC 279
           +Y +    A  GKA     CCC
Sbjct: 171 KYKKEDLPAAAGKASNGNKCCC 192


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 19.4 bits (38), Expect = 7.7
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +2

Query: 164 ENVNFQMETYVYKGRGDGTHVINLRRTWERLVLADRA 274
           ENVN  +  +V  G   G   I L        LAD A
Sbjct: 234 ENVNSTVVNWVNAGADPGKLTIGLAFYGHTFQLADPA 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,674
Number of Sequences: 336
Number of extensions: 1279
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4790565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)