Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_P19
(282 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 85 6e-18
Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical pr... 27 1.6
Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical pr... 27 1.6
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr... 27 2.1
Z81107-11|CAJ90502.1| 476|Caenorhabditis elegans Hypothetical p... 27 2.7
Z81107-10|CAB03233.1| 646|Caenorhabditis elegans Hypothetical p... 27 2.7
Z73103-12|CAJ90500.1| 476|Caenorhabditis elegans Hypothetical p... 27 2.7
Z73103-11|CAA97431.1| 646|Caenorhabditis elegans Hypothetical p... 27 2.7
U64843-12|AAL08039.1| 492|Caenorhabditis elegans Hypothetical p... 25 6.3
Z92837-2|CAB07401.1| 324|Caenorhabditis elegans Hypothetical pr... 25 8.4
U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical pr... 25 8.4
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 85.4 bits (202), Expect = 6e-18
Identities = 38/65 (58%), Positives = 51/65 (78%)
Frame = +2
Query: 83 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVL 262
MSGG AL+EEDV K+LA HLG+ N+NFQM+ YVYK R DG ++IN+++TWE+L+L
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 263 ADRAV 277
A RA+
Sbjct: 61 AARAI 65
>Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical
protein F25F2.1b protein.
Length = 584
Score = 27.5 bits (58), Expect = 1.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 147 PPIWERKMLISRWRRTFIKAVVTVRT 224
PP + RK+L + WR ++ VT+ T
Sbjct: 100 PPNFARKVLEAEWREMYVDPKVTIET 125
>Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical
protein F25F2.1a protein.
Length = 581
Score = 27.5 bits (58), Expect = 1.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 147 PPIWERKMLISRWRRTFIKAVVTVRT 224
PP + RK+L + WR ++ VT+ T
Sbjct: 100 PPNFARKVLEAEWREMYVDPKVTIET 125
>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
M03A8.2 protein.
Length = 2275
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 242 YAED*LRAYRHHGLYKRTSPSGN*HFPLPNGWSPQA 135
+A+D Y HH + ++ SPS N + G+SP A
Sbjct: 1838 WADDHDLTYTHHDVVRQESPSFNCNISPIKGYSPPA 1873
>Z81107-11|CAJ90502.1| 476|Caenorhabditis elegans Hypothetical
protein R07H5.2b protein.
Length = 476
Score = 26.6 bits (56), Expect = 2.7
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +2
Query: 50 TRLVVTLTNATMSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVI 229
T + + T+AT + L +L + +DV ++L +FQ+ G+G H++
Sbjct: 323 TECMRSATSATRAATLAILEENRKDVRQLLT-----DCSTQHFQLVKEASMGQGYDRHLL 377
Query: 230 NLRRTWERL 256
L+ T +RL
Sbjct: 378 GLKITAQRL 386
>Z81107-10|CAB03233.1| 646|Caenorhabditis elegans Hypothetical
protein R07H5.2a protein.
Length = 646
Score = 26.6 bits (56), Expect = 2.7
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +2
Query: 50 TRLVVTLTNATMSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVI 229
T + + T+AT + L +L + +DV ++L +FQ+ G+G H++
Sbjct: 493 TECMRSATSATRAATLAILEENRKDVRQLLT-----DCSTQHFQLVKEASMGQGYDRHLL 547
Query: 230 NLRRTWERL 256
L+ T +RL
Sbjct: 548 GLKITAQRL 556
>Z73103-12|CAJ90500.1| 476|Caenorhabditis elegans Hypothetical
protein R07H5.2b protein.
Length = 476
Score = 26.6 bits (56), Expect = 2.7
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +2
Query: 50 TRLVVTLTNATMSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVI 229
T + + T+AT + L +L + +DV ++L +FQ+ G+G H++
Sbjct: 323 TECMRSATSATRAATLAILEENRKDVRQLLT-----DCSTQHFQLVKEASMGQGYDRHLL 377
Query: 230 NLRRTWERL 256
L+ T +RL
Sbjct: 378 GLKITAQRL 386
>Z73103-11|CAA97431.1| 646|Caenorhabditis elegans Hypothetical
protein R07H5.2a protein.
Length = 646
Score = 26.6 bits (56), Expect = 2.7
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +2
Query: 50 TRLVVTLTNATMSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKGRGDGTHVI 229
T + + T+AT + L +L + +DV ++L +FQ+ G+G H++
Sbjct: 493 TECMRSATSATRAATLAILEENRKDVRQLLT-----DCSTQHFQLVKEASMGQGYDRHLL 547
Query: 230 NLRRTWERL 256
L+ T +RL
Sbjct: 548 GLKITAQRL 556
>U64843-12|AAL08039.1| 492|Caenorhabditis elegans Hypothetical
protein K06C4.9 protein.
Length = 492
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 40 VALYAFSRNSYKRNDVGRIRLA 105
V++Y +SRN K+N +G + L+
Sbjct: 170 VSIYVYSRNHMKKNTIGFLLLS 191
>Z92837-2|CAB07401.1| 324|Caenorhabditis elegans Hypothetical
protein R03E1.2 protein.
Length = 324
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 131 KMLAATTHLGAENVNFQMETYVYKGRGDGTHVINLRRTWERLVLADR 271
+ LA T +GA+N+N +TY K DG + + + ADR
Sbjct: 71 RALAVVTVIGADNLNLGGKTYSTK--SDGVENVGFDQDMALIFGADR 115
>U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical
protein F42A10.1 protein.
Length = 712
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 116 EEDVTKMLAATTHLGAENVNFQMETYVYK 202
+E TK L T + AEN NF+ ++K
Sbjct: 86 QEATTKRLEQTVDMAAENQNFEALQSIWK 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,535,742
Number of Sequences: 27780
Number of extensions: 120087
Number of successful extensions: 247
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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