Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_P18
(204 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 54 1e-08
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 44 1e-05
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 44 2e-05
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 36 0.003
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 33 0.028
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 33 0.028
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 33 0.028
AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore... 33 0.037
AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore... 33 0.037
Z81523-5|CAB04240.2| 298|Caenorhabditis elegans Hypothetical pr... 31 0.11
U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily ass... 31 0.11
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 31 0.11
AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical... 31 0.11
AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical... 31 0.11
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 0.34
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 29 0.34
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 29 0.45
Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical p... 29 0.45
Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical p... 29 0.45
U41007-1|AAA82264.1| 326|Caenorhabditis elegans Hypothetical pr... 29 0.45
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 29 0.45
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 29 0.45
Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical p... 29 0.60
Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical p... 29 0.60
U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical pr... 29 0.60
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 29 0.60
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 29 0.60
Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical pr... 28 0.79
AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical ... 28 0.79
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 27 1.4
U41007-2|AAA82265.1| 248|Caenorhabditis elegans Hypothetical pr... 27 1.4
AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical ... 27 1.4
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 27 1.4
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 27 1.4
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 1.8
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 1.8
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 27 1.8
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 27 1.8
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 27 2.4
AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical ... 27 2.4
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 27 2.4
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 27 2.4
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 26 4.2
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z66521-10|CAH10788.1| 359|Caenorhabditis elegans Hypothetical p... 26 4.2
Z66521-9|CAA91402.1| 367|Caenorhabditis elegans Hypothetical pr... 26 4.2
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 26 4.2
Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical pr... 25 5.6
AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical ... 25 7.4
U28738-3|AAA68310.2| 468|Caenorhabditis elegans Hypothetical pr... 25 9.7
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 54.4 bits (125), Expect = 1e-08
Identities = 25/44 (56%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = +3
Query: 39 MSETLKLRGTLCGHNGWITQIATNPKY-PDMILSSSRDKTLIVW 167
+ E +KL GTL GH GW+TQIAT + +LSSSRDKT++VW
Sbjct: 2 VQEQMKLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVW 45
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 66 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 179
+L GHN +++ + + LS S DKTL +W L +
Sbjct: 64 SLTGHNHFVSDVVISSD-GQFALSGSWDKTLRLWDLNQ 100
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 44.0 bits (99), Expect = 1e-05
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +3
Query: 78 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 188
H +I QIA NP+ P+M +S S DKTL VWKL E+
Sbjct: 233 HAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQES 269
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 43.6 bits (98), Expect = 2e-05
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +3
Query: 60 RGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 188
R +L GH G + +A NP P M++S D T+ VW L R ET
Sbjct: 558 RYSLVGHRGHVNAVAWNPADPTMLVSCGADATIRVWSLDRSET 600
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 36.3 bits (80), Expect = 0.003
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 75 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGL 200
GH ++ QIA NPK + ++S DKT+ VW+ + N+ L
Sbjct: 140 GHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFTL 181
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 33.1 bits (72), Expect = 0.028
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 66 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT 176
TL H W+ +A +PK ++S + DKTL VW+L+
Sbjct: 327 TLLAHENWVRGLAFHPK-GKYLISVADDKTLRVWELS 362
Score = 27.9 bits (59), Expect = 1.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 24 WGFIKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT 176
W F + + LK +L GH ++ + P D +LS+SRD T+ W ++
Sbjct: 175 WDFGQTYDCLK---SLKGHEHTVSSVTFLPT-GDFVLSASRDHTIKQWDIS 221
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 33.1 bits (72), Expect = 0.028
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 66 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 179
TL HN I Q++ +P Y ++ SS D +IVW +++
Sbjct: 303 TLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISK 340
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 75 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT 176
GH G + + NP P I SS L VW+++
Sbjct: 365 GHTGKVADFSWNPNRPWTICSSDEFNALQVWEVS 398
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +3
Query: 66 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 173
T GH + I NP ++ + S DKT+ +W +
Sbjct: 259 TAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDM 294
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 33.1 bits (72), Expect = 0.028
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 66 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT 176
TL H W+ +A +PK ++S + DKTL VW+L+
Sbjct: 327 TLLAHENWVRGLAFHPK-GKYLISVADDKTLRVWELS 362
Score = 27.9 bits (59), Expect = 1.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 24 WGFIKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT 176
W F + + LK +L GH ++ + P D +LS+SRD T+ W ++
Sbjct: 175 WDFGQTYDCLK---SLKGHEHTVSSVTFLPT-GDFVLSASRDHTIKQWDIS 221
>AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform b protein.
Length = 211
Score = 32.7 bits (71), Expect = 0.037
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +3
Query: 69 LCGHNGWITQIA-TNPKYPDMILSSSRDKTLIVW 167
L GH+G + +++ +PKY ++ S+S DK +I+W
Sbjct: 54 LVGHSGPVWKVSWAHPKYGGLLASASYDKKVIIW 87
>AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform a protein.
Length = 313
Score = 32.7 bits (71), Expect = 0.037
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +3
Query: 69 LCGHNGWITQIA-TNPKYPDMILSSSRDKTLIVW 167
L GH+G + +++ +PKY ++ S+S DK +I+W
Sbjct: 54 LVGHSGPVWKVSWAHPKYGGLLASASYDKKVIIW 87
>Z81523-5|CAB04240.2| 298|Caenorhabditis elegans Hypothetical
protein F32H2.4 protein.
Length = 298
Score = 31.1 bits (67), Expect = 0.11
Identities = 10/39 (25%), Positives = 23/39 (58%)
Frame = +3
Query: 78 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNY 194
H+ + Q+A + K P++ S+S D+ + VW + + + +
Sbjct: 46 HSSSVEQVACSEKQPNLFASASADRNICVWDIRQSKPTH 84
>U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily
assigned gene nameprotein 345 protein.
Length = 439
Score = 31.1 bits (67), Expect = 0.11
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 57 LRGTLCGH-NGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETN 191
++ + GH NGW+ + NP + +S S DKT +W + +++
Sbjct: 358 VKQSFIGHQNGWVEAVKWNPLDTNQFVSVSTDKTAKMWDVRSSKSS 403
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 31.1 bits (67), Expect = 0.11
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 78 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 179
H+ IT AT+PK + I + SRD +L +W++ +
Sbjct: 1334 HSDEITCFATSPKGGNFIATGSRDMSLKIWQIDK 1367
>AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical
protein T02H6.1b protein.
Length = 528
Score = 31.1 bits (67), Expect = 0.11
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 18 AHWGFIKMSETLKLR----GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRD 182
A W F K L +R GT G WI +A P Y D++ S S + L +WK++ +
Sbjct: 357 ALWSFWK-KRALHVRKQAHGTQNGSGRWIVALAVLP-YSDLLASGSNEGELKLWKISEN 413
>AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical
protein T02H6.1a protein.
Length = 550
Score = 31.1 bits (67), Expect = 0.11
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 18 AHWGFIKMSETLKLR----GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRD 182
A W F K L +R GT G WI +A P Y D++ S S + L +WK++ +
Sbjct: 357 ALWSFWK-KRALHVRKQAHGTQNGSGRWIVALAVLP-YSDLLASGSNEGELKLWKISEN 413
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 29.5 bits (63), Expect = 0.34
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 69 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDE 185
L GH I ++ + Y ILSS D+T+ +W L+R+E
Sbjct: 713 LKGHTADILDVSWSKNY--FILSSGMDRTVKLWHLSRNE 749
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 29.5 bits (63), Expect = 0.34
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 69 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDE 185
L GH I ++ + Y ILSS D+T+ +W L+R+E
Sbjct: 713 LKGHTADILDVSWSKNY--FILSSGMDRTVKLWHLSRNE 749
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 29.1 bits (62), Expect = 0.45
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 75 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 173
GH I+ + NP P ++ S S D L VW++
Sbjct: 364 GHTAKISDFSWNPNEPWVVCSVSEDNILQVWQM 396
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 69 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYG 197
L GH ++ NP +ILS+S D+T+ W + ++ G
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAG 210
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 78 HNGWITQIATNPKYPDMILSS-SRDKTLIVWKL 173
H+ + +A NP Y + IL++ S DKT+ +W L
Sbjct: 264 HSAEVNCLAFNP-YSEFILATGSADKTVALWDL 295
>Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 29.1 bits (62), Expect = 0.45
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 42 SETLKLRGTLC-GHNGWITQIATNPKYPDMILSSSRDKTLIVW 167
S + + +C GH + +A+ P P+ LS+S DKT+ +W
Sbjct: 151 SSSFTFQTIVCPGHTLSVWALASFPDLPNTYLSASADKTIRMW 193
>Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 29.1 bits (62), Expect = 0.45
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 42 SETLKLRGTLC-GHNGWITQIATNPKYPDMILSSSRDKTLIVW 167
S + + +C GH + +A+ P P+ LS+S DKT+ +W
Sbjct: 151 SSSFTFQTIVCPGHTLSVWALASFPDLPNTYLSASADKTIRMW 193
>U41007-1|AAA82264.1| 326|Caenorhabditis elegans Hypothetical
protein C33H5.7 protein.
Length = 326
Score = 29.1 bits (62), Expect = 0.45
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 75 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 173
GH+ +T I +P DM LS + DKT+ +W L
Sbjct: 110 GHDKLVTGINVSPM-DDMFLSVAEDKTIRLWDL 141
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 29.1 bits (62), Expect = 0.45
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 75 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 173
GH I+ + NP P ++ S S D L VW++
Sbjct: 364 GHTAKISDFSWNPNEPWVVCSVSEDNILQVWQM 396
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 69 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYG 197
L GH ++ NP +ILS+S D+T+ W + ++ G
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAG 210
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 78 HNGWITQIATNPKYPDMILSS-SRDKTLIVWKL 173
H+ + +A NP Y + IL++ S DKT+ +W L
Sbjct: 264 HSAEVNCLAFNP-YSEFILATGSADKTVALWDL 295
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 29.1 bits (62), Expect = 0.45
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 75 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 173
GH I+ + NP P ++ S S D L VW++
Sbjct: 364 GHTAKISDFSWNPNEPWVVCSVSEDNILQVWQM 396
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 69 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYG 197
L GH ++ NP +ILS+S D+T+ W + ++ G
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAG 210
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 78 HNGWITQIATNPKYPDMILSS-SRDKTLIVWKL 173
H+ + +A NP Y + IL++ S DKT+ +W L
Sbjct: 264 HSAEVNCLAFNP-YSEFILATGSADKTVALWDL 295
>Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 28.7 bits (61), Expect = 0.60
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 75 GHNGWITQIATNPKYPDMILSSSRDKTLIVW 167
GH + +A+ P P+ LS+S DKT+ +W
Sbjct: 161 GHTLSVWALASFPDLPNTYLSASADKTIRMW 191
>Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 28.7 bits (61), Expect = 0.60
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 75 GHNGWITQIATNPKYPDMILSSSRDKTLIVW 167
GH + +A+ P P+ LS+S DKT+ +W
Sbjct: 161 GHTLSVWALASFPDLPNTYLSASADKTIRMW 191
>U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical
protein ZK430.7 protein.
Length = 444
Score = 28.7 bits (61), Expect = 0.60
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 66 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDE 185
+L GH + +A +P P + S +RD + +W L E
Sbjct: 61 SLDGHVDGVQVLAKHPNRPSTVFSGARDGQVKIWNLASRE 100
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 28.7 bits (61), Expect = 0.60
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +3
Query: 75 GHNGWITQIATNPKYPDMILSSSRDKTLIVWK----LTRDETNYGL 200
GH+ W+ + ++L++S DKT I+WK L RD+ G+
Sbjct: 285 GHDDWVHSTVWSND-GRVLLTASSDKTCIIWKEIDNLWRDDVRLGI 329
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 60 RGTLCGHNGWITQIATNPKYPDMILSSSRDKT 155
+ + GH +TQIA NP +L+ SRD+T
Sbjct: 601 KSEIIGHQLTVTQIAWNPS-GTRLLTVSRDRT 631
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 66 TLCGHNGWITQIATNPKYPD--MILSSSRDKTLIVWKL 173
++ GH WI IA N PD ++ S+ +D + +W +
Sbjct: 202 SVAGHTDWIHSIAFNDN-PDHLLVASAGQDTYVRLWAI 238
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 28.7 bits (61), Expect = 0.60
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 75 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 179
GH ++ + +P D+ILS+S DK++ VW + +
Sbjct: 249 GHYNNVSSVIFHPN-ADLILSNSEDKSIRVWDMQK 282
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 69 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT 176
L GHN ++ +P D++ S+S D+T+ VW ++
Sbjct: 133 LTGHNHYVMCAQFHPT-EDLVASASLDQTVRVWDIS 167
>Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 28.3 bits (60), Expect = 0.79
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 48 TLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT 176
++K L GH+ IT + + + +++S+SRD T++VW L+
Sbjct: 574 SMKKLSVLNGHSDAITCLVSCQSHA-VLVSASRDLTVLVWHLS 615
>AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 28.3 bits (60), Expect = 0.79
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 48 TLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT 176
++K L GH+ IT + + + +++S+SRD T++VW L+
Sbjct: 574 SMKKLSVLNGHSDAITCLVSCQSHA-VLVSASRDLTVLVWHLS 615
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 123 DMILSSSRDKTLIVWKLTRDETNYGL 200
D ++S D L VW + RDE Y L
Sbjct: 178 DQVISGGIDNVLKVWDMRRDEITYTL 203
>U41007-2|AAA82265.1| 248|Caenorhabditis elegans Hypothetical
protein C33H5.6 protein.
Length = 248
Score = 27.5 bits (58), Expect = 1.4
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 75 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYG 197
GH + I TNPK + LSSS D + ++ TR NYG
Sbjct: 109 GHRMPVNFIRTNPKDREKFLSSSVDGEIRMFD-TRTFENYG 148
>AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical
protein Y48B6A.1 protein.
Length = 674
Score = 27.5 bits (58), Expect = 1.4
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +3
Query: 75 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 173
GH G + I P+ +++ S D T+ +W +
Sbjct: 342 GHTGQVRAITVEPERGELLASGGEDGTVRIWMI 374
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 27.5 bits (58), Expect = 1.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 75 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 188
GH +T ++ N Y I+SSS D T+ +W L T
Sbjct: 363 GHQDSVTSVSFNTDY--RIVSSSDDATVKIWDLRNMRT 398
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 27.5 bits (58), Expect = 1.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 75 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 188
GH +T ++ N Y I+SSS D T+ +W L T
Sbjct: 361 GHQDSVTSVSFNTDY--RIVSSSDDATVKIWDLRNMRT 396
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 63 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 179
G GH +T + + +LS+S+D+T+ VW L +
Sbjct: 312 GVFAGHRDGVTHVDSRQD-ERYLLSNSKDQTIKVWDLRK 349
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 63 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 179
G GH +T + + +LS+S+D+T+ VW L +
Sbjct: 353 GVFAGHRDGVTHVDSRQD-ERYLLSNSKDQTIKVWDLRK 390
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 18 AHWGFIKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 173
A W + + + +R L GH + + + +Y I+S+S D+T+ VW +
Sbjct: 325 AVWDMVSPRD-ITIRRVLVGHRAAVNVVDFDDRY---IVSASGDRTIKVWSM 372
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 18 AHWGFIKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 173
A W + + + +R L GH + + + +Y I+S+S D+T+ VW +
Sbjct: 325 AVWDMVSPRD-ITIRRVLVGHRAAVNVVDFDDRY---IVSASGDRTIKVWSM 372
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +3
Query: 63 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 188
G + H + +++ + SRD+ + +WKL+RD +
Sbjct: 74 GIIAAHGEQVADFGFLTFADELLATCSRDEPVKIWKLSRDHS 115
>AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical
protein Y18D10A.9 protein.
Length = 337
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 108 NPKYPDMILSSSRDKTLIVWKL 173
NPK+ +++ S+S D T+ +W+L
Sbjct: 314 NPKFSNLLTSASDDGTIRLWEL 335
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +3
Query: 63 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 188
G + H + +++ + SRD+ + +WKL+RD +
Sbjct: 74 GIIAAHGEQVADFGFLTFADELLATCSRDEPVKIWKLSRDHS 115
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +3
Query: 63 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 188
G + H + +++ + SRD+ + +WKL+RD +
Sbjct: 74 GIIAAHGEQVADFGFLTFADELLATCSRDEPVKIWKLSRDHS 115
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
protein C03D6.4 protein.
Length = 1390
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 108 NPKYPDMILSSSRDKTLIVWKL 173
NP +PD +SS D++++V K+
Sbjct: 164 NPAFPDTFAASSTDRSILVAKI 185
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/49 (24%), Positives = 18/49 (36%)
Frame = +3
Query: 54 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGL 200
KL GH GW+ + P S D+ + +W L + L
Sbjct: 175 KLYRVASGHTGWVRAVDVEPG-NQWFASGGADRIIKIWDLASGQLKLSL 222
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/49 (24%), Positives = 18/49 (36%)
Frame = +3
Query: 54 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGL 200
KL GH GW+ + P S D+ + +W L + L
Sbjct: 175 KLYRVASGHTGWVRAVDVEPG-NQWFASGGADRIIKIWDLASGQLKLSL 222
>Z66521-10|CAH10788.1| 359|Caenorhabditis elegans Hypothetical
protein W02B12.12b protein.
Length = 359
Score = 25.8 bits (54), Expect = 4.2
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +3
Query: 3 NCTRAAHWGFIKMSETLKLRGTLCGHNGW 89
NC + + +GF++ + L T CG +
Sbjct: 228 NCVKLSDFGFVRKMDESALSSTFCGSKSY 256
>Z66521-9|CAA91402.1| 367|Caenorhabditis elegans Hypothetical
protein W02B12.12a protein.
Length = 367
Score = 25.8 bits (54), Expect = 4.2
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +3
Query: 3 NCTRAAHWGFIKMSETLKLRGTLCGHNGW 89
NC + + +GF++ + L T CG +
Sbjct: 228 NCVKLSDFGFVRKMDESALSSTFCGSKSY 256
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 54 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 173
KL T GHN + + PK + LS S D + +W++
Sbjct: 266 KLVHTYRGHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWEV 305
>Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical
protein JC8.2 protein.
Length = 467
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 75 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 173
GH + +A N ++ S DKT+++W L
Sbjct: 244 GHTDAVISLAWNRITTHVLASGGADKTVVLWDL 276
>Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical
protein T01C3.1 protein.
Length = 727
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +3
Query: 75 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 173
GH G + I P P++ ++ RD + +W +
Sbjct: 137 GHEGSVRSICFAPDDPNVFVTGGRDFQVKIWDM 169
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 78 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 179
H+G I + P+ I+S S D T+ W L +
Sbjct: 92 HDGAIMDVVGVPQKESQIVSISGDSTIRCWDLNQ 125
>AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical
protein Y43F4B.4 protein.
Length = 363
Score = 25.0 bits (52), Expect = 7.4
Identities = 7/32 (21%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 78 HNGWITQIA-TNPKYPDMILSSSRDKTLIVWK 170
H G + ++ +P++ ++ + S D+T+++W+
Sbjct: 61 HGGAVWRVIWAHPEFGQIVATCSYDRTIVIWE 92
>U28738-3|AAA68310.2| 468|Caenorhabditis elegans Hypothetical
protein T28D9.4 protein.
Length = 468
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 105 TNPKYPDMILSSSRDKTLIVWKLTRD 182
TNP YP + +S++ K ++ LTRD
Sbjct: 444 TNPYYPQTVYNSNQSKNNLL-PLTRD 468
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,482,815
Number of Sequences: 27780
Number of extensions: 67599
Number of successful extensions: 214
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 12,740,198
effective HSP length: 47
effective length of database: 11,434,538
effective search space used: 228690760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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