Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_P16
(333 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6; Metazoa... 77 6e-14
UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72; Fungi/... 76 2e-13
UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila melanogaster|... 68 5e-11
UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4; Bilater... 62 3e-09
UniRef50_Q0ULI2 Cluster: Predicted protein; n=12; Pezizomycotina... 56 1e-07
UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella ve... 54 5e-07
UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3; ... 53 1e-06
UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2; Cryptos... 52 2e-06
UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyosteli... 52 3e-06
UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2; Cryptospor... 51 4e-06
UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10; Eurya... 50 8e-06
UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22; Fung... 50 1e-05
UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes va... 48 3e-05
UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;... 48 3e-05
UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22; Viri... 48 4e-05
UniRef50_O22165 Cluster: Probable ribosome biogenesis protein RL... 48 5e-05
UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein RL... 47 7e-05
UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1; ... 47 1e-04
UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10... 47 1e-04
UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13... 47 1e-04
UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177, w... 46 1e-04
UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein RL... 46 1e-04
UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN full... 46 2e-04
UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2; Deutero... 46 2e-04
UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein RL... 46 2e-04
UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2; ... 45 3e-04
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 45 3e-04
UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellul... 45 3e-04
UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=... 45 4e-04
UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, wh... 44 5e-04
UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5; ... 44 7e-04
UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1; ... 44 7e-04
UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein RL... 44 7e-04
UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3; ... 44 9e-04
UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=... 44 9e-04
UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=... 44 9e-04
UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative... 43 0.001
UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lambl... 43 0.002
UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;... 43 0.002
UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia... 42 0.002
UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein RL... 42 0.003
UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containin... 42 0.004
UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11; Eurya... 38 0.059
UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2; Thermoprot... 37 0.10
UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6; T... 35 0.31
UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6; Haloba... 34 0.55
UniRef50_A4WYA1 Cluster: Putative uncharacterized protein; n=1; ... 34 0.72
UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1; ... 34 0.72
UniRef50_Q980Q6 Cluster: 50S ribosomal protein L24e; n=6; Thermo... 33 1.3
UniRef50_Q9AVV9 Cluster: 60S ribosomal protein L24; n=1; Guillar... 33 1.7
UniRef50_Q7SBG4 Cluster: Predicted protein; n=1; Neurospora cras... 32 2.9
UniRef50_Q2H2A6 Cluster: Putative uncharacterized protein; n=1; ... 32 2.9
UniRef50_A0UAJ8 Cluster: Transcriptional regulator, AraC family;... 31 5.1
UniRef50_A7SQI2 Cluster: Predicted protein; n=1; Nematostella ve... 31 5.1
UniRef50_Q7U5X8 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_Q2W8D4 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_Q3WAW9 Cluster: Recombinase; n=3; Bacteria|Rep: Recombi... 31 6.7
UniRef50_A6SXN3 Cluster: Autotransporter; n=1; Janthinobacterium... 31 6.7
UniRef50_A0RMM8 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_UPI0000E47905 Cluster: PREDICTED: similar to Ndc1 prote... 30 8.9
UniRef50_Q64N29 Cluster: Putative outer membrane protein probabl... 30 8.9
UniRef50_Q01KI2 Cluster: H0404F02.15 protein; n=8; Oryza sativa|... 30 8.9
UniRef50_Q4P694 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
UniRef50_Q2HC62 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
>UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6;
Metazoa|Rep: 60S ribosomal protein L24 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 157
Score = 77.4 bits (182), Expect = 6e-14
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPRVSN 206
MK+ LC++SGYKIYPGHG+ +VDGK F FLN+KCE+ L +RNPR N
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARVDGKVFQFLNAKCESAFLSKRNPRQIN 50
Score = 58.0 bits (134), Expect = 4e-08
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = +1
Query: 202 VTWTVLYRRRFPKGHEEEQAKKRARRTQKFQRAIVGASL 318
+ WTVLYRR+ KG EE +KKR RR KFQRAI GASL
Sbjct: 49 INWTVLYRRKHKKGQSEEVSKKRTRRAVKFQRAITGASL 87
>UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24 -
Homo sapiens (Human)
Length = 157
Score = 75.8 bits (178), Expect = 2e-13
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPRVSN 206
MK+ LC++SGYKIYPGHG+ + DGK F FLN+KCE+ L +RNPR N
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQIN 50
Score = 56.8 bits (131), Expect = 9e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = +1
Query: 202 VTWTVLYRRRFPKGHEEEQAKKRARRTQKFQRAIVGASL 318
+ WTVLYRR+ KG EE KKR RR KFQRAI GASL
Sbjct: 49 INWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAITGASL 87
>UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila
melanogaster|Rep: RH14088p - Drosophila melanogaster
(Fruit fly)
Length = 123
Score = 67.7 bits (158), Expect = 5e-11
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = +1
Query: 202 VTWTVLYRRRFPKGHEEEQAKKRARRTQKFQRAIVGASL 318
VTWTVLYRR+ KG EEE +KKR RRTQKFQRAIVGASL
Sbjct: 8 VTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASL 46
>UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4;
Bilateria|Rep: 60S ribosomal protein L24 -
Caenorhabditis elegans
Length = 159
Score = 61.7 bits (143), Expect = 3e-09
Identities = 27/47 (57%), Positives = 32/47 (68%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
MK+ C YSGYKI+PGHGK LV+ DGK FL+ K +RRNPR
Sbjct: 1 MKVETCVYSGYKIHPGHGKRLVRTDGKVQIFLSGKALKGAKLRRNPR 47
Score = 33.9 bits (74), Expect = 0.72
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +1
Query: 202 VTWTVLYRRRFPKG-HEEEQA--KKRARRTQKFQRAIVGASL 318
+ WTVLYR + KG H +EQ KK + Q RA+ G SL
Sbjct: 49 IRWTVLYRIKNKKGTHGQEQVTRKKTKKSVQVVNRAVAGLSL 90
>UniRef50_Q0ULI2 Cluster: Predicted protein; n=12;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 161
Score = 56.4 bits (130), Expect = 1e-07
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 202 VTWTVLYRRRFPKGHEEEQAKKRARRTQKFQRAIVGASL 318
++WT LYRR KG EE AKKR RRT K QRAIVGASL
Sbjct: 49 ISWTTLYRRMHKKGISEEVAKKRTRRTVKHQRAIVGASL 87
Score = 50.8 bits (116), Expect = 6e-06
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +3
Query: 75 AYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
++SG KIYPG GK ++ D K F F N K E++ L R+NPR
Sbjct: 7 SFSGQKIYPGKGKLYIRGDSKIFRFQNGKTESLFLQRKNPR 47
>UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 143
Score = 54.4 bits (125), Expect = 5e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1
Query: 202 VTWTVLYRRRFPKGHEEEQAKKRARRTQKFQRAIVGASL 318
VTWTVLYR + KG +EE +KKR RR KFQR++ GASL
Sbjct: 29 VTWTVLYRCKHKKGTQEEVSKKRTRRNIKFQRSVQGASL 67
Score = 35.1 bits (77), Expect = 0.31
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 135 KTFTFLNSKCEAVHLMRRNPRVSNMDRSIQT*IPKGARRRTGQETCKKDTK 287
K F FLN +CE LMRRNPR + KG + ++ +++ K
Sbjct: 7 KVFNFLNKRCERALLMRRNPREVTWTVLYRCKHKKGTQEEVSKKRTRRNIK 57
>UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3;
cellular organisms|Rep: 60S ribosomal protein L24 -
Entamoeba histolytica HM-1:IMSS
Length = 179
Score = 52.8 bits (121), Expect = 1e-06
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
M+I C + G IYPGHG V+ D K F F SKC M+RNPR
Sbjct: 1 MRIEKCYFCGANIYPGHGMMFVRNDAKVFWFCRSKCHKSFKMKRNPR 47
>UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L24 -
Cryptosporidium parvum Iowa II
Length = 202
Score = 52.4 bits (120), Expect = 2e-06
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPRVSNMDRS 218
M+I C Y IYPGHG T V+ D K F F SKC M+ NPR S ++
Sbjct: 6 MRIEKCWYCSSNIYPGHGVTFVRNDAKIFRFCRSKCHRHFKMKHNPRKSKWTKA 59
>UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L24 -
Dictyostelium discoideum AX4
Length = 127
Score = 51.6 bits (118), Expect = 3e-06
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
MK LC YS +KIYP G V+ D K F F+N+K E++ + NPR
Sbjct: 1 MKTSLCNYSEFKIYPARGMKFVRGDSKVFHFINTKVESLFFRKINPR 47
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +1
Query: 202 VTWTVLYRRRFPKGHEEEQAKKRARRTQKFQRAIVGASL 318
+ W+++YRR + + AKK+AR+T+K +R IVGASL
Sbjct: 49 IRWSMVYRRIYKNTTTDVSAKKKARKTKKVERNIVGASL 87
>UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2;
Cryptosporidium|Rep: Ribosomal protein L24e -
Cryptosporidium hominis
Length = 133
Score = 51.2 bits (117), Expect = 4e-06
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNP 194
+K LC+YS Y+IYPG G+ V DG+ TFLN KC ++ + P
Sbjct: 8 IKTDLCSYSEYRIYPGRGRKFVARDGRVSTFLNQKCASLFHQKIRP 53
>UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanococcus jannaschii
Length = 70
Score = 50.4 bits (115), Expect = 8e-06
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +3
Query: 72 CAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
C++ GY+I PG GK +V+ DG F +SKCE + M RNPR
Sbjct: 7 CSFCGYEIEPGKGKMVVEKDGTVLYFCSSKCEKSYRMGRNPR 48
>UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 155
Score = 50.0 bits (114), Expect = 1e-05
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +1
Query: 202 VTWTVLYRRRFPKGHEEEQAKKRARRTQKFQRAIVGASL 318
+ WTVL+R+ KG EE AKKR+R+T K QR I GASL
Sbjct: 49 IAWTVLFRKHHKKGITEEVAKKRSRKTVKAQRPITGASL 87
Score = 49.6 bits (113), Expect = 1e-05
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
MK+ + ++SG KIYPG G V+ D K F F NSK ++ R+NPR
Sbjct: 1 MKVEVDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPR 47
>UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes
vannus|Rep: Ribosomal protein L24 - Euplotes vannus
Length = 155
Score = 48.4 bits (110), Expect = 3e-05
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +3
Query: 60 KIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMR 185
K LC +S YK+YPG G V+ DG+TF FL+ K ++H +
Sbjct: 4 KTELCHFSEYKVYPGRGHRFVRKDGRTFFFLSRKTRSLHFQK 45
Score = 37.1 bits (82), Expect = 0.078
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +1
Query: 202 VTWTVLYRRRFPKGHEEEQAKKRARRTQKFQRAIVGASL 318
+TWT ++RR+ KG + A+ R +RT + +A+VG SL
Sbjct: 51 LTWTPMWRRKNRKGAYAKAARVRTKRTTRKMKAVVGMSL 89
>UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;
cellular organisms|Rep: Ribosome biogenesis protein
rlp24 - Schizosaccharomyces pombe (Fission yeast)
Length = 192
Score = 48.4 bits (110), Expect = 3e-05
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
M++ C + +YPGHG V+ D K F F SKC M+RNPR
Sbjct: 1 MRVHTCYFCSGPVYPGHGIMFVRNDSKVFRFCRSKCHKNFKMKRNPR 47
>UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22;
Viridiplantae|Rep: 60S ribosomal protein L24-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 164
Score = 48.0 bits (109), Expect = 4e-05
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCE 167
+K LC +SG KIYPG G ++ D + F FLNSKC+
Sbjct: 3 LKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCK 39
Score = 38.7 bits (86), Expect = 0.025
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 193 PV*VTWTVLYRRRFPKGHEEEQAKKRARRTQK-FQRAIVGASL 318
P + WT +YR++ K +E K+R R T+K + R+IVGA+L
Sbjct: 48 PSKLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATL 90
>UniRef50_O22165 Cluster: Probable ribosome biogenesis protein
RLP24; n=3; core eudicotyledons|Rep: Probable ribosome
biogenesis protein RLP24 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 159
Score = 47.6 bits (108), Expect = 5e-05
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
M++ C + IYPGHG V+ D K F F SKC M+RNPR
Sbjct: 1 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPR 47
>UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein
RLP24; n=10; Coelomata|Rep: Probable ribosome biogenesis
protein RLP24 - Drosophila melanogaster (Fruit fly)
Length = 191
Score = 47.2 bits (107), Expect = 7e-05
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
M+I C + KIYPGHG V+ D K F F KC ++NPR
Sbjct: 1 MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPR 47
>UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 178
Score = 46.8 bits (106), Expect = 1e-04
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
++I C++ G I+PGHG V+ D K F F SKC + ++NPR
Sbjct: 2 VRIEKCSFCGGPIWPGHGTVYVRNDCKVFRFCKSKCRKFWMKKKNPR 48
>UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 199
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
M+I C + YPGHG V+ D K F F SKC RRNPR
Sbjct: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPR 47
>UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 198
Score = 46.8 bits (106), Expect = 1e-04
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
M++ C + YPGHG V+ D K F F SKC RRNPR
Sbjct: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPR 47
>UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=7; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_177,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 162
Score = 46.4 bits (105), Expect = 1e-04
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEA 170
+K LC++S ++IYPGHG+ V DG+ F +LN K A
Sbjct: 3 IKTDLCSFSEWRIYPGHGRRFVAKDGRLFYYLNQKSRA 40
Score = 39.5 bits (88), Expect = 0.015
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +1
Query: 202 VTWTVLYRRRFPKGHEEEQAKKRARRTQKFQRAIVGASL 318
+ WTV +RR K +E AKKR R K QRAIVG SL
Sbjct: 51 IQWTVAWRRLNKKIKTDEGAKKRRIRNLKVQRAIVGISL 89
>UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Eukaryota|Rep: Probable ribosome biogenesis
protein RLP24 - Dictyostelium discoideum (Slime mold)
Length = 164
Score = 46.4 bits (105), Expect = 1e-04
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPRVSNMDRSIQ 224
M+I C + +YPGHG V+ D K F F SKC ++RNPR + ++ +
Sbjct: 1 MRIEKCYFCSGPVYPGHGVMFVRNDCKQFRFCRSKCHKNFKLKRNPRKTRWTKAFR 56
>UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830167A21
product:Similar to 60S ribosomal protein L30 isolog,
full insert sequence; n=3; Murinae|Rep: Bone marrow
macrophage cDNA, RIKEN full-length enriched library,
clone:I830167A21 product:Similar to 60S ribosomal
protein L30 isolog, full insert sequence - Mus musculus
(Mouse)
Length = 171
Score = 46.0 bits (104), Expect = 2e-04
Identities = 21/47 (44%), Positives = 25/47 (53%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
M+I C + IYPGHG V+ D K F F SKC +RNPR
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPR 47
>UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2;
Deuterostomia|Rep: 60S ribosomal protein L24 -
Oikopleura dioica (Tunicate)
Length = 165
Score = 46.0 bits (104), Expect = 2e-04
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
M++ C + +YPGHG V+ D K F F +KC + ++NPR
Sbjct: 1 MRVEKCYFCSAPVYPGHGTVFVRNDSKQFRFCTAKCNKMFKKKKNPR 47
>UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein
RLP24; n=35; Euteleostomi|Rep: Probable ribosome
biogenesis protein RLP24 - Homo sapiens (Human)
Length = 163
Score = 46.0 bits (104), Expect = 2e-04
Identities = 21/47 (44%), Positives = 25/47 (53%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
M+I C + IYPGHG V+ D K F F SKC +RNPR
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPR 47
>UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L24 - Entamoeba histolytica HM-1:IMSS
Length = 163
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +3
Query: 51 VKMKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
+ +K +CA+SG+KI G+ V++D K+FTF+N K L + NPR
Sbjct: 1 MSIKTQVCAFSGFKIPVAKGRKYVRLDLKSFTFINKKSLMQFLRKTNPR 49
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 202 VTWTVLYRRRFPKGHEEEQA-KKRARRTQKFQRAIVGAS 315
V WT +YR+ KG + E KK+ RR K R G S
Sbjct: 51 VFWTAIYRQLNKKGQQNELVEKKKTRRVIKVNRGYSGIS 89
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 45.2 bits (102), Expect = 3e-04
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
M++ C + +YP G T V+ D K+F F SKC A M+R PR
Sbjct: 1 MRVETCHFCSRPVYPSKGITFVRNDAKSFRFCRSKCHANFKMKRQPR 47
>UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellular
organisms|Rep: 50S ribosomal protein L24e -
Archaeoglobus fulgidus
Length = 58
Score = 45.2 bits (102), Expect = 3e-04
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHL-MRRNPR 197
M+ +C++ GY I PG GK V+ DG+ F F + KCE L ++R PR
Sbjct: 1 MEKRVCSFCGYDIEPGTGKMYVRRDGRVFYFCSGKCEKNMLKLKRKPR 48
>UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L24, putative -
Theileria parva
Length = 159
Score = 44.8 bits (101), Expect = 4e-04
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 72 CAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNP 194
C ++ Y++YPG GK V DGK + F+N K A H + P
Sbjct: 17 CNFTDYRVYPGRGKKFVARDGKVYFFINGKSAAFHKRKVKP 57
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 193 PV*VTWTVLYRRRFPKGHEEEQAKKRARRTQKFQRAIVGASL 318
P + W + +R+ K E +KR+++T + Q+AIVG SL
Sbjct: 57 PAKLKWNLAWRKANKKFQTELFNRKRSKKTSRPQKAIVGLSL 98
>UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, whole
genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
undetermined scaffold_52, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 171
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPRVSNMDRSIQ 224
M+I C + IYPGHG V+ D K F F SKC + NPR + ++ +
Sbjct: 1 MRIEKCYFCSGPIYPGHGIVFVRNDSKMFRFCRSKCHRHFKAQHNPRKTRWTKAFR 56
>UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 213
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
M+I C Y IYPGHG ++ D + F F SKC + NPR
Sbjct: 1 MRIEKCWYCSGNIYPGHGIHFIRNDARVFRFCRSKCHKHFKAKHNPR 47
>UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 181
Score = 44.0 bits (99), Expect = 7e-04
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
M+I C + YPG G T V+ D K F F SKC ++RNPR
Sbjct: 1 MRIEHCFFCSAPCYPGKGITFVRNDAKIFKFCKSKCHKNFKLKRNPR 47
>UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Caenorhabditis|Rep: Probable ribosome
biogenesis protein RLP24 - Caenorhabditis elegans
Length = 162
Score = 44.0 bits (99), Expect = 7e-04
Identities = 25/78 (32%), Positives = 36/78 (46%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPRVSNMDRSIQT*IP 236
M+I C + IYPGHG V+ D F F S+C + ++NPR +
Sbjct: 1 MRIEKCYFCSSPIYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPR--------KLRFT 52
Query: 237 KGARRRTGQETCKKDTKV 290
K ARR G+E T++
Sbjct: 53 KAARRARGKELINDATQL 70
>UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 178
Score = 43.6 bits (98), Expect = 9e-04
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPRVSNMDRSIQT*IP 236
+K C++S Y+IYPG G+ + DGK + +L+SK ++ L ++ ++ +
Sbjct: 8 VKTEACSFSEYRIYPGRGQKYIAKDGKVYFYLSSKFASLALQKKKAAKLRWTQTWRRNNK 67
Query: 237 KGARRRTGQETCKKDTKVPACNC 305
K T + KK KV C
Sbjct: 68 KTKVEATQRRRYKKTIKVQKAVC 90
>UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=2;
Plasmodium (Vinckeia)|Rep: 60S ribosomal protein L24,
putative - Plasmodium chabaudi
Length = 130
Score = 43.6 bits (98), Expect = 9e-04
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPRVSNMDRSIQT*IP 236
+K C++S Y+IYPG G+ + DGK + +L+SK ++ L ++ ++ +
Sbjct: 8 VKTEACSFSEYRIYPGRGQKYIAKDGKVYFYLSSKFASLALQKKKAAKLRWTQTWRRNNK 67
Query: 237 KGARRRTGQETCKKDTKVPACNC 305
K T + KK KV C
Sbjct: 68 KTKVEATQRRRYKKTIKVQKAVC 90
>UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L24, putative -
Babesia bovis
Length = 192
Score = 43.6 bits (98), Expect = 9e-04
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
M+I C IYPGHG V+ D K F F SKC + NPR
Sbjct: 1 MRIDKCWLCSSNIYPGHGIVFVRNDSKIFRFCRSKCHKHFKAKHNPR 47
>UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative;
n=2; Theileria|Rep: 60S ribosomal protein L24/L30,
putative - Theileria annulata
Length = 187
Score = 43.2 bits (97), Expect = 0.001
Identities = 20/47 (42%), Positives = 22/47 (46%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
M I C IYPGHG V+ D K F F SKC + NPR
Sbjct: 1 MNINKCWLCSSNIYPGHGIVFVRNDSKIFRFCRSKCHRHFKAKHNPR 47
>UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_154_26137_25568 - Giardia lamblia
ATCC 50803
Length = 189
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 60 KIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
+I C++ +YPG G V+ D + F F SKC M+RNPR
Sbjct: 3 RIEHCSFCSKPVYPGKGICFVRNDSRVFRFCTSKCHRNFKMKRNPR 48
>UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;
Ajellomyces capsulatus NAm1|Rep: Ribosome biogenesis
protein RLP24 - Ajellomyces capsulatus NAm1
Length = 191
Score = 42.7 bits (96), Expect = 0.002
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
M+I C + YP G T V+ D +TF F SKC M+R PR
Sbjct: 1 MRIETCHFCSQPCYPSKGITFVRNDARTFRFCRSKCHKNFKMKRQPR 47
>UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_2_13062_12754 - Giardia lamblia ATCC
50803
Length = 102
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3
Query: 72 CAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
C+YSG KI PG+GK + + D FLN K +L + NPR
Sbjct: 7 CSYSGRKILPGYGKRMSRHDKVLLIFLNRKASVHYLNKWNPR 48
>UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein
RLP24; n=1; Encephalitozoon cuniculi|Rep: Probable
ribosome biogenesis protein RLP24 - Encephalitozoon
cuniculi
Length = 155
Score = 41.9 bits (94), Expect = 0.003
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
M+I C + IY GHG V+ D K F F KC + R NPR
Sbjct: 1 MRIEKCWFCSSNIYQGHGTIYVRNDAKVFRFCRPKCRKLFARRVNPR 47
>UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L24e containing protein - Tetrahymena
thermophila SB210
Length = 158
Score = 41.5 bits (93), Expect = 0.004
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMR 185
++ G C++ Y+IYPG G+ + DG+ F FL K + + L +
Sbjct: 3 VRTGTCSFCEYRIYPGRGQRFIAKDGRGFFFLTKKAKCLSLRK 45
Score = 33.5 bits (73), Expect = 0.96
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 202 VTWTVLYRRRFPKGHEEEQAKKRARRTQKFQRAIVGASL 318
+TWT+ RR + K + A+K+ +R RAIVG SL
Sbjct: 51 ITWTIARRRLWKKVKATDIAQKKKKRNVTVARAIVGISL 89
>UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 62
Score = 37.5 bits (83), Expect = 0.059
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 72 CAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
C + G + PG GK +K DG T+ +SKC + + R PR
Sbjct: 6 CYFCGQMLEPGTGKLYIKKDGSTYFMCSSKCMSNFALGRLPR 47
>UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2;
Thermoproteaceae|Rep: Ribosomal protein L24E -
Caldivirga maquilingensis IC-167
Length = 70
Score = 36.7 bits (81), Expect = 0.10
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 57 MKIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKC-EAVHLMRRNPRVSNMDRSIQ 224
M+I C+Y G I PG+G V+VDG F + +C ++ M +NP+ R I+
Sbjct: 1 MRIYNCSYCGRPIPPGYGIMYVRVDGVVLRFCSRRCFVSMVKMGKNPQKQAWVRKIR 57
>UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L24, putative -
Leishmania major
Length = 124
Score = 35.1 bits (77), Expect = 0.31
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +3
Query: 72 CAYSGYKIYPGHGKTLVKV----DGKTFTFLNSKCEAVHLMRRNPR 197
C +S + ++PGHG+ V TF KC A+++ ++NPR
Sbjct: 6 CEFSHFAVHPGHGRRYVPFAFLSTKPVLTFSRPKCFALYMRKKNPR 51
Score = 34.7 bits (76), Expect = 0.41
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 202 VTWTVLYRRRFPKGHEEEQAKKRARRTQKFQRAIVGASLT 321
+ WT YRR K + ++RA R + QRAIVGA L+
Sbjct: 53 IPWTRTYRRIHRKTTTDRVNRRRAARAVRVQRAIVGADLS 92
>UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6;
Halobacteriaceae|Rep: 50S ribosomal protein L24e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 67
Score = 34.3 bits (75), Expect = 0.55
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +3
Query: 72 CAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCE 167
C Y G I PG G V DG T F +SKCE
Sbjct: 7 CDYCGTDIEPGTGTMFVHKDGATTHFCSSKCE 38
>UniRef50_A4WYA1 Cluster: Putative uncharacterized protein; n=1;
Rhodobacter sphaeroides ATCC 17025|Rep: Putative
uncharacterized protein - Rhodobacter sphaeroides ATCC
17025
Length = 197
Score = 33.9 bits (74), Expect = 0.72
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -3
Query: 304 QLHAGTFVSFLHVSWPVLLRAPLGIYVCIERSMLLTRGFL 185
+LHAG V +LR+PLGI + + R +LL +GFL
Sbjct: 137 RLHAGKQVRLRTARSKGILRSPLGIVLAVTRRVLLRQGFL 176
>UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 113
Score = 33.9 bits (74), Expect = 0.72
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 60 KIGLCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPR 197
K +C +SG+ + GHG+ ++ D F + K + +RNPR
Sbjct: 4 KTEICGFSGHIFHAGHGRVHIREDKHLMAFESRKAFRMWERKRNPR 49
>UniRef50_Q980Q6 Cluster: 50S ribosomal protein L24e; n=6;
Thermoprotei|Rep: 50S ribosomal protein L24e -
Sulfolobus solfataricus
Length = 61
Score = 33.1 bits (72), Expect = 1.3
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 72 CAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCEAVHL-MRRNPR 197
C++ G++I PG G V+ DG F +SKC L R+P+
Sbjct: 7 CSFCGHEIPPGTGLMYVRNDGTILWFCSSKCRKSMLKYHRDPK 49
>UniRef50_Q9AVV9 Cluster: 60S ribosomal protein L24; n=1; Guillardia
theta|Rep: 60S ribosomal protein L24 - Guillardia theta
(Cryptomonas phi)
Length = 106
Score = 32.7 bits (71), Expect = 1.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 69 LCAYSGYKIYPGHGKTLVKVDGKTFTFLNSKCE 167
+C + G IYPGHG V F F ++KC+
Sbjct: 3 ICNFCGIGIYPGHGSMFVTNKFDKFYFCSTKCK 35
>UniRef50_Q7SBG4 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 589
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 16 DNFDTDLFRFVESK*RSVFALTVATRSILAMEKPWLRWT 132
D D DLF+ +E + R ALT+A+ + + PWL T
Sbjct: 391 DIIDADLFQDLERRRRCSLALTIASSFVQLLGSPWLPTT 429
>UniRef50_Q2H2A6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1090
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -1
Query: 297 TLELLCPSCTFLGLFFFVPLWESTSV*NGPCYLHGDFSSSNGQLHIWSSRM 145
T LC C + L+ SV P LHGD + QL +WSS +
Sbjct: 354 TFTELCKLCVIMNQIIN-KLYAEKSVRKHPSQLHGDLETLKKQLELWSSEL 403
>UniRef50_A0UAJ8 Cluster: Transcriptional regulator, AraC family;
n=3; Burkholderia cenocepacia|Rep: Transcriptional
regulator, AraC family - Burkholderia cenocepacia MC0-3
Length = 446
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 299 ARWNFCVLLARFLACSSSCPFGNLRLYRTVHVTYTGISPHQM 174
ARW C A L+ + C FG+ T+ + G++P Q+
Sbjct: 390 ARWRLCHTSASILSIALDCGFGSQSYLTTLVKRHYGVTPRQL 431
>UniRef50_A7SQI2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 96
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +3
Query: 135 KTFTFLNSKCEAV-HLMRRNPRVSNMDRSIQ--T*IPKGARRRTG-QETCKKDTKVPACN 302
K T L+ C+ + HL + R++++ + + T + KG +R T + CK+ T +
Sbjct: 13 KRMTHLSKGCKRMTHLSKGCKRMTHLSKVCKRMTHLSKGCKRMTHLSKVCKRMTHLSTKG 72
Query: 303 CRSFTHMT 326
C+ TH++
Sbjct: 73 CKKITHLS 80
>UniRef50_Q7U5X8 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. WH 8102|Rep: Putative uncharacterized
protein - Synechococcus sp. (strain WH8102)
Length = 603
Score = 30.7 bits (66), Expect = 6.7
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -3
Query: 193 GFLLIKWTASHLEFKNVNVLPSTLTRVFPWPG*IL*PL*AQRPIFILTPRNE 38
GF+ + ASHL N + LP T+T P P + P P +LTP E
Sbjct: 387 GFMKLDHNASHLSDANQDPLPETVTNPTPEP--VPTPTPEPTPATVLTPTPE 436
>UniRef50_Q2W8D4 Cluster: Putative uncharacterized protein; n=1;
Magnetospirillum magneticum AMB-1|Rep: Putative
uncharacterized protein - Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264)
Length = 651
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = -3
Query: 262 WPVLLRAPLGIYVCIERSMLLTRGFLLIKWTASHLEFKNVNVLPSTLTRVFPWPG*IL*P 83
WP+ + + C+ S LT +LI TA L + + V P L PW +L
Sbjct: 196 WPLTVTLAIAALACVYSSHSLTAWSILIGGTALVLASERLPVQPVRLFTRSPWGSAVLVA 255
Query: 82 L*AQRPIFIL 53
+ A P F L
Sbjct: 256 VGALLPPFAL 265
>UniRef50_Q3WAW9 Cluster: Recombinase; n=3; Bacteria|Rep:
Recombinase - Frankia sp. EAN1pec
Length = 722
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +1
Query: 1 ARVDFDNFDTDLFRFVESK*RSVFALTVATRSILAMEKPWLRWTA 135
A D D +TD RFVE++ +++ A A + LA + P L WTA
Sbjct: 470 ALADLDRLETDYQRFVEARPQTLTAAERAAITALAHDLPAL-WTA 513
>UniRef50_A6SXN3 Cluster: Autotransporter; n=1; Janthinobacterium
sp. Marseille|Rep: Autotransporter - Janthinobacterium
sp. (strain Marseille) (Minibacterium massiliensis)
Length = 886
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 102 GHGKTLVKVDGKTFTFLNSKCEAVHLMRRNPRVSNMDRSIQT 227
G G T+V G T LNS +A+H++ N ++N D +I T
Sbjct: 152 GVGNTIVNSAGSQITTLNSGSDAIHVVGGNNTITN-DGTIST 192
>UniRef50_A0RMM8 Cluster: Putative uncharacterized protein; n=1;
Campylobacter fetus subsp. fetus 82-40|Rep: Putative
uncharacterized protein - Campylobacter fetus subsp.
fetus (strain 82-40)
Length = 462
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -3
Query: 220 IERSMLLTRGFLLIKWTASHLEFKNVNVLPSTLTRVFP 107
IER LL GF+ I +EFK VN+L T++ P
Sbjct: 5 IERKFLLNNGFMQIALMLEGVEFKKVNIL-QFYTKIAP 41
>UniRef50_UPI0000E47905 Cluster: PREDICTED: similar to Ndc1 protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to Ndc1 protein - Strongylocentrotus purpuratus
Length = 756
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 268 VSWPVLLRAP-LGIYVCIERSMLLTRGFLLIKWTASHLEFKNVNVL 134
++W +LL P LG+Y+C+ LL LI W + F ++ +
Sbjct: 21 IAWSMLLLPPALGVYICLAHFSLLHPTAWLIGWIRTCFSFHGMSCI 66
>UniRef50_Q64N29 Cluster: Putative outer membrane protein probably
involved in nutrient binding; n=2; Bacteroides
fragilis|Rep: Putative outer membrane protein probably
involved in nutrient binding - Bacteroides fragilis
Length = 998
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 29 PIFFVSWSQ-NEDRSLRLQWLQDLSWPWKN 115
P ++VS +Q NE SL W +D +W W+N
Sbjct: 449 PKYYVSETQKNETNSLSKTWDRDFTWLWEN 478
>UniRef50_Q01KI2 Cluster: H0404F02.15 protein; n=8; Oryza
sativa|Rep: H0404F02.15 protein - Oryza sativa (Rice)
Length = 593
Score = 30.3 bits (65), Expect = 8.9
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -3
Query: 259 PVLLRAPLGIYVCIERSMLLTRGFLLIKWTAS---HLEFKNVNVLP 131
PVL+R PLGI IE + L LL+ W+ S +L+F ++V P
Sbjct: 7 PVLVRGPLGIVTGIELAFFLLFLALLV-WSYSAFINLDFSKIHVKP 51
>UniRef50_Q4P694 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 663
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 271 HVSWPVLLRAPLGIYVCIERSMLLTRGFLLIKW 173
H+++PV++RAP GIY+ + R FL + W
Sbjct: 223 HIAFPVIIRAPWGIYL----FPVAARAFLALMW 251
>UniRef50_Q2HC62 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 688
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 232 IYVCIERSMLLTRGFLLIKWTASHLE 155
++V IER + + GFL + W AS LE
Sbjct: 491 LFVAIERGTVASLGFLAVLWAASRLE 516
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,532,310
Number of Sequences: 1657284
Number of extensions: 7554568
Number of successful extensions: 20294
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 19865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20290
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 10394654088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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