Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_P15
(367 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY616149-1|AAT40462.1| 1070|Drosophila melanogaster NMDA recepto... 27 5.7
AY616148-1|AAT40461.1| 1083|Drosophila melanogaster NMDA recepto... 27 5.7
AY616147-1|AAT40460.1| 902|Drosophila melanogaster NMDA recepto... 27 5.7
AY616146-1|AAT40459.1| 902|Drosophila melanogaster NMDA recepto... 27 5.7
AY616145-1|AAT40458.1| 902|Drosophila melanogaster NMDA recepto... 27 5.7
AY616144-1|AAT40457.1| 902|Drosophila melanogaster NMDA recepto... 27 5.7
AY050491-1|AAL12479.1| 902|Drosophila melanogaster glutamate NM... 27 5.7
AY050490-1|AAL12478.1| 902|Drosophila melanogaster glutamate NM... 27 5.7
AF381249-1|AAM46167.1| 841|Drosophila melanogaster NMDA recepto... 27 5.7
AE014298-228|AAF45639.3| 902|Drosophila melanogaster CG33513-PB... 27 5.7
AE014298-227|AAN09051.2| 902|Drosophila melanogaster CG33513-PA... 27 5.7
AE014298-226|AAF45640.2| 1083|Drosophila melanogaster CG33513-PC... 27 5.7
>AY616149-1|AAT40462.1| 1070|Drosophila melanogaster NMDA receptor
subunit 2-3 protein.
Length = 1070
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 152 QHPKLMGNLSLTAHKNKLIRW 90
+ P L+GNLSL A L RW
Sbjct: 1050 ERPPLLGNLSLAASAQDLYRW 1070
>AY616148-1|AAT40461.1| 1083|Drosophila melanogaster NMDA receptor
subunit 2-2 protein.
Length = 1083
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 152 QHPKLMGNLSLTAHKNKLIRW 90
+ P L+GNLSL A L RW
Sbjct: 1050 ERPPLLGNLSLAASAQDLYRW 1070
>AY616147-1|AAT40460.1| 902|Drosophila melanogaster NMDA receptor
subunit 2-1f protein.
Length = 902
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 152 QHPKLMGNLSLTAHKNKLIRW 90
+ P L+GNLSL A L RW
Sbjct: 869 ERPPLLGNLSLAASAQDLYRW 889
>AY616146-1|AAT40459.1| 902|Drosophila melanogaster NMDA receptor
subunit 2-1e protein.
Length = 902
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 152 QHPKLMGNLSLTAHKNKLIRW 90
+ P L+GNLSL A L RW
Sbjct: 869 ERPPLLGNLSLAASAQDLYRW 889
>AY616145-1|AAT40458.1| 902|Drosophila melanogaster NMDA receptor
subunit 2-1d protein.
Length = 902
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 152 QHPKLMGNLSLTAHKNKLIRW 90
+ P L+GNLSL A L RW
Sbjct: 869 ERPPLLGNLSLAASAQDLYRW 889
>AY616144-1|AAT40457.1| 902|Drosophila melanogaster NMDA receptor
subunit 2-1c protein.
Length = 902
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 152 QHPKLMGNLSLTAHKNKLIRW 90
+ P L+GNLSL A L RW
Sbjct: 869 ERPPLLGNLSLAASAQDLYRW 889
>AY050491-1|AAL12479.1| 902|Drosophila melanogaster glutamate NMDA
receptor subunitvariant NR2-b protein.
Length = 902
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 152 QHPKLMGNLSLTAHKNKLIRW 90
+ P L+GNLSL A L RW
Sbjct: 869 ERPPLLGNLSLAASAQDLYRW 889
>AY050490-1|AAL12478.1| 902|Drosophila melanogaster glutamate NMDA
receptor subunitvariant NR2-a protein.
Length = 902
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 152 QHPKLMGNLSLTAHKNKLIRW 90
+ P L+GNLSL A L RW
Sbjct: 869 ERPPLLGNLSLAASAQDLYRW 889
>AF381249-1|AAM46167.1| 841|Drosophila melanogaster NMDA receptor 2
protein.
Length = 841
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 152 QHPKLMGNLSLTAHKNKLIRW 90
+ P L+GNLSL A L RW
Sbjct: 808 ERPPLLGNLSLAASAQDLYRW 828
>AE014298-228|AAF45639.3| 902|Drosophila melanogaster CG33513-PB,
isoform B protein.
Length = 902
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 152 QHPKLMGNLSLTAHKNKLIRW 90
+ P L+GNLSL A L RW
Sbjct: 869 ERPPLLGNLSLAASAQDLYRW 889
>AE014298-227|AAN09051.2| 902|Drosophila melanogaster CG33513-PA,
isoform A protein.
Length = 902
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 152 QHPKLMGNLSLTAHKNKLIRW 90
+ P L+GNLSL A L RW
Sbjct: 869 ERPPLLGNLSLAASAQDLYRW 889
>AE014298-226|AAF45640.2| 1083|Drosophila melanogaster CG33513-PC,
isoform C protein.
Length = 1083
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 152 QHPKLMGNLSLTAHKNKLIRW 90
+ P L+GNLSL A L RW
Sbjct: 1050 ERPPLLGNLSLAASAQDLYRW 1070
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,106,573
Number of Sequences: 53049
Number of extensions: 268978
Number of successful extensions: 552
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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