Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_P13
(363 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 133 1e-30
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 124 5e-28
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 112 2e-24
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 109 1e-23
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 103 1e-21
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 103 1e-21
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 101 5e-21
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 87 7e-17
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 81 4e-15
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 80 1e-14
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 79 2e-14
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 78 6e-14
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 73 2e-12
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 65 4e-10
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 63 2e-09
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 60 9e-09
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 59 2e-08
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 56 2e-07
UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila melanogaster|... 56 2e-07
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 53 1e-06
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 52 3e-06
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 50 1e-05
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 49 3e-05
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 48 7e-05
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 46 2e-04
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 46 2e-04
UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S riboso... 45 4e-04
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 40 0.010
UniRef50_UPI0000E4908F Cluster: PREDICTED: similar to Ncoa6 prot... 36 0.22
UniRef50_Q8SZ38 Cluster: RE18076p; n=1; Drosophila melanogaster|... 34 0.89
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 34 0.89
UniRef50_A2EP33 Cluster: Putative uncharacterized protein; n=1; ... 31 4.8
UniRef50_Q5B561 Cluster: Predicted protein; n=1; Emericella nidu... 31 6.3
UniRef50_UPI000023E18A Cluster: hypothetical protein FG03950.1; ... 31 8.3
UniRef50_Q09F96 Cluster: Ymf77; n=1; Tetrahymena malaccensis|Rep... 31 8.3
UniRef50_Q7SF05 Cluster: Predicted protein; n=1; Neurospora cras... 31 8.3
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 133 bits (321), Expect = 1e-30
Identities = 64/101 (63%), Positives = 75/101 (74%)
Frame = +1
Query: 61 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 240
MSG LD+L + EEDV K LAA THLG N++FQME Y+YKR+ DG ++INL+RTWEK
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 241 XXXXXXXXEDPADVFVISSRAFGQRAVLKYAAHTGATPIAG 363
E+PADV VISSR GQRAVLK+AA TGATPIAG
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAG 101
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 124 bits (299), Expect = 5e-28
Identities = 56/101 (55%), Positives = 76/101 (75%)
Frame = +1
Query: 61 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 240
MSGGL++L++ E+DVTK+LAA THLG NV+ QM YV+K +GDG +IN+R+TWEK
Sbjct: 1 MSGGLEVLSMKEDDVTKLLAAGTHLGDSNVDIQMAQYVFKTKGDGVPIINVRKTWEKLLL 60
Query: 241 XXXXXXXXEDPADVFVISSRAFGQRAVLKYAAHTGATPIAG 363
E+PADV V++++ FGQRA+LK+A +TGA PIAG
Sbjct: 61 AARVIAAIENPADVCVLANKPFGQRAILKFAHYTGAFPIAG 101
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 112 bits (270), Expect = 2e-24
Identities = 49/99 (49%), Positives = 71/99 (71%)
Frame = +1
Query: 67 GGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXX 246
G ++L ++ED+ ++LAA H+G++N+ +M+ YV+KRR DG H++NL +TWEK
Sbjct: 5 GRPNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAA 64
Query: 247 XXXXXXEDPADVFVISSRAFGQRAVLKYAAHTGATPIAG 363
E+PADV V+S+R +G RAVLK+AAHTGAT IAG
Sbjct: 65 RVIATIENPADVCVVSTRTYGHRAVLKFAAHTGATAIAG 103
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 109 bits (263), Expect = 1e-23
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = +1
Query: 88 LSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXE 267
L+ ED +LAA THLGA NV E YV+ R DG HVIN+ +TWEK
Sbjct: 9 LTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIP 68
Query: 268 DPADVFVISSRAFGQRAVLKYAAHTGATPIAG 363
+P DV ISSR FGQRAVLK+AAHTGATPIAG
Sbjct: 69 NPEDVVAISSRTFGQRAVLKFAAHTGATPIAG 100
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 103 bits (247), Expect = 1e-21
Identities = 47/94 (50%), Positives = 63/94 (67%)
Frame = +1
Query: 82 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXX 261
++ E D+ MLAA HLG +NV+FQME YV+KRR DG H+INL +TW+K
Sbjct: 31 MSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIVA 90
Query: 262 XEDPADVFVISSRAFGQRAVLKYAAHTGATPIAG 363
E+P DV ++R +GQRAVLK+A +TGA +AG
Sbjct: 91 VENPQDVIAQAARPYGQRAVLKFAQYTGAKALAG 124
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 103 bits (246), Expect = 1e-21
Identities = 48/94 (51%), Positives = 61/94 (64%)
Frame = +1
Query: 82 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXX 261
L+ E DV M AA HLG +N N+QME YV+KRR DG ++ NL +TWEK
Sbjct: 12 LSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVA 71
Query: 262 XEDPADVFVISSRAFGQRAVLKYAAHTGATPIAG 363
E+P D+ V S+R +GQRAVLK+A +TGA IAG
Sbjct: 72 IENPQDIIVQSARPYGQRAVLKFAQYTGANAIAG 105
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 101 bits (241), Expect = 5e-21
Identities = 44/101 (43%), Positives = 62/101 (61%)
Frame = +1
Query: 61 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 240
MSGG++ L L E+D+ M+AA HLG+ N N+QM+ YVY R +G H+I+L +TWEK
Sbjct: 1 MSGGIEALELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLL 60
Query: 241 XXXXXXXXEDPADVFVISSRAFGQRAVLKYAAHTGATPIAG 363
E+PADV +I + QR LK+ +TG T + G
Sbjct: 61 AARAICAIENPADVVIIGGQPTWQRGALKFGHYTGTTSVPG 101
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 87.4 bits (207), Expect = 7e-17
Identities = 39/92 (42%), Positives = 57/92 (61%)
Frame = +1
Query: 88 LSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXE 267
L E DV KML ATTHLG N++ +M+ Y++ R+ DGT V NL++ W K +
Sbjct: 15 LKEADVKKMLVATTHLGVRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILVTID 74
Query: 268 DPADVFVISSRAFGQRAVLKYAAHTGATPIAG 363
DPA++ V+++R QRA+LK+ +T AT G
Sbjct: 75 DPAEIAVVANRPDAQRAILKFCKYTHATAFPG 106
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 81.4 bits (192), Expect = 4e-15
Identities = 39/101 (38%), Positives = 56/101 (55%)
Frame = +1
Query: 61 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 240
M+ L E+ + ML A H+G +NV +M YVY R +G H+INL T EK
Sbjct: 1 MAAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKV 60
Query: 241 XXXXXXXXEDPADVFVISSRAFGQRAVLKYAAHTGATPIAG 363
+P +V V+S+R +G RAVLK++ + G+ PIAG
Sbjct: 61 AARAIVTVSNPEEVVVVSARPYGSRAVLKFSHYVGSHPIAG 101
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 80.2 bits (189), Expect = 1e-14
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +1
Query: 76 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEK--XXXXXX 249
D+L S ED+ M+A H+GA N+NF ME YVY+R + + NL +TWEK
Sbjct: 15 DILKPSAEDIKMMVACRVHIGATNLNFAMEEYVYERGNNNECIFNLMKTWEKLSLAARVI 74
Query: 250 XXXXXEDPADVFVISSRAFGQRAVLKYAAHTGATPIAG 363
E P+DV ++ R RA LK+ +TG T +AG
Sbjct: 75 AGISNETPSDVVAVAGREMAHRASLKFMKYTGCTAVAG 112
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 79.4 bits (187), Expect = 2e-14
Identities = 33/92 (35%), Positives = 57/92 (61%)
Frame = +1
Query: 76 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXX 255
D ++ E+D+ +++A+ H+G + ++F M+ YV R +G++++NL TW+
Sbjct: 31 DCMSRKEQDIKRLIASQCHVGTKQLHFDMKRYVSHRSDNGSYILNLEETWQHIKLAARVI 90
Query: 256 XXXEDPADVFVISSRAFGQRAVLKYAAHTGAT 351
E P DV V+SSR GQRAV+K+A +T A+
Sbjct: 91 AAIEQPQDVMVVSSRPIGQRAVIKFAHYTQAS 122
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 77.8 bits (183), Expect = 6e-14
Identities = 42/89 (47%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +1
Query: 85 ALSEEDVTKM-LAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXX 261
A E V KM LAA +LG+ N++F M+ YV+ R DGTHVINL T+EK
Sbjct: 6 AADREAVIKMMLAAKVYLGSTNLSFGMKPYVFTCRKDGTHVINLAMTYEKIKLAARMIYA 65
Query: 262 XEDPADVFVISSRAFGQRAVLKYAAHTGA 348
E+P DV IS+++FG RAV K+A GA
Sbjct: 66 VEEPKDVLAISTKSFGTRAVHKFAEFLGA 94
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 72.9 bits (171), Expect = 2e-12
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +1
Query: 100 DVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPAD 279
DV K++A H G +N + M+ Y++ R +GT++I+L TWEK E+P D
Sbjct: 34 DVQKLVAMHCHFGTKNRSNAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVIAAVENPQD 93
Query: 280 VFVISSRAFGQRAVLKYAAHTGATPIAG 363
V V S+R FGQRA+ K++ G + +AG
Sbjct: 94 VTVCSTRLFGQRAIFKFSQLVGMSFLAG 121
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 64.9 bits (151), Expect = 4e-10
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +1
Query: 112 MLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVI 291
+L A THLG N +F+M +YKR +G ++NL R++EK + P++V VI
Sbjct: 1 LLVAGTHLGDTNPDFKMIHSIYKRETNG--ILNLERSYEKLLPVACTIVAVKHPSEVGVI 58
Query: 292 SSRAFGQRAVLKYAAHTGATPIAG 363
SSR GQ A+LK AA +GA+P G
Sbjct: 59 SSRNSGQWAMLKLAAASGASPTVG 82
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 62.9 bits (146), Expect = 2e-09
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +1
Query: 76 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRG-DGTHVINLRRTWEKXXXXXXX 252
D + + +E V ++ + +HLG + N Y+Y R D ++I++ TWEK
Sbjct: 10 DSIKIPDEFVKLLIVSQSHLGGTSTNKSFARYLYGTRPRDRINIIDINATWEKLIIAARA 69
Query: 253 XXXXEDPADVFVISSRAFGQRAVLKYAAHTGATPIAG 363
+ P+ + V+S++ FG++ V+K+ GATPI G
Sbjct: 70 FCGIKHPSSIAVVSTKTFGRKPVVKFCEAVGATPITG 106
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 60.5 bits (140), Expect = 9e-09
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +1
Query: 61 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGT-HVINL 213
MSGGL+ LAL E+DV K LA+ H+G+ N++++M Y+YKR+ DG H I L
Sbjct: 1 MSGGLECLALKEDDVQKFLASGAHIGSSNMDYKMAPYIYKRKPDGNIHSIGL 52
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 59.3 bits (137), Expect = 2e-08
Identities = 28/57 (49%), Positives = 36/57 (63%)
Frame = +1
Query: 193 GTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFGQRAVLKYAAHTGATPIAG 363
G +INL +TWEK E+P D+ V S+R +GQRAVLK+A +TGA IAG
Sbjct: 46 GIFIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG 102
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 56.0 bits (129), Expect = 2e-07
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +1
Query: 91 SEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXED 270
+E D+ K+L H+G M+ YV+K+R DG ++IN+ +T +K E
Sbjct: 4 NENDIKKLLICNVHIGLSACTQLMKVYVWKKRSDGIYIINILKTIQKIELAARAIISIEH 63
Query: 271 PADVFVISSRAFGQRAVLKYA 333
P + +SS Q A++K++
Sbjct: 64 PKHIIAVSSNNIHQTAIIKFS 84
>UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila
melanogaster|Rep: GM15484p - Drosophila melanogaster
(Fruit fly)
Length = 92
Score = 56.0 bits (129), Expect = 2e-07
Identities = 31/73 (42%), Positives = 36/73 (49%)
Frame = -2
Query: 230 FSHVRRRLIT*VPSPRRL*TYVSIWKLTFSAPKWXXXXXXXXXXXXXXXXXSNPPDIVAF 51
FS V RL PS RRL TY SIWKLTFS P+W S PPD++ +
Sbjct: 21 FSQVLPRLRMLTPSARRLYTYCSIWKLTFSEPRWVVATNILVMSSSLRDRISKPPDMLTW 80
Query: 50 VRVTTKRV*CHWE 12
+ T R C WE
Sbjct: 81 KELRTSR--CRWE 91
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/94 (29%), Positives = 50/94 (53%)
Frame = +1
Query: 82 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXX 261
+ + EE+ K + H+G + + M+ Y++K R DG +++++++T K
Sbjct: 5 MLIPEEEYQK---SGVHIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGKMLAR 61
Query: 262 XEDPADVFVISSRAFGQRAVLKYAAHTGATPIAG 363
E P D+ V++ R + R V K+A TGAT I G
Sbjct: 62 FE-PQDILVVAQRQYAFRPVAKFAEVTGATAITG 94
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 52.0 bits (119), Expect = 3e-06
Identities = 26/87 (29%), Positives = 46/87 (52%)
Frame = +1
Query: 103 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADV 282
V L+A H+G + ME++VY+ R +G +V+++R+ E+ DP D+
Sbjct: 39 VDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSRY-DPQDI 97
Query: 283 FVISSRAFGQRAVLKYAAHTGATPIAG 363
V++SR + R V K+A G+ + G
Sbjct: 98 IVVASRPYAYRPVQKFAEVVGSRALVG 124
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 50.4 bits (115), Expect = 1e-05
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +1
Query: 265 EDPADVFVISSRAFGQRAVLKYAAHTGATPIAG 363
E+ ADV VISSR GQRAVLK+AA TGATPIAG
Sbjct: 149 ENLADVSVISSRNTGQRAVLKFAAATGATPIAG 181
Score = 33.1 bits (72), Expect = 1.6
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 58 TMSGGLDLLALSEEDVTKMLAATTH 132
TM G D+L ++EEDV K LAA TH
Sbjct: 110 TMFGAPDVLQMNEEDVLKFLAARTH 134
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 48.8 bits (111), Expect = 3e-05
Identities = 23/83 (27%), Positives = 43/83 (51%)
Frame = +1
Query: 115 LAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVIS 294
LA+ H+G + ME ++Y+ R DG +V+++R+T E+ E P D+ +S
Sbjct: 14 LASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYE-PEDILAVS 72
Query: 295 SRAFGQRAVLKYAAHTGATPIAG 363
R + + ++ +TG +AG
Sbjct: 73 RRIYTMGPLEEFGKYTGIRTVAG 95
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 47.6 bits (108), Expect = 7e-05
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = +1
Query: 103 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADV 282
+ + LAA H+G + M +VY+ R DG +V++++ T E+ DPA +
Sbjct: 40 IDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVASKLLSHY-DPARI 98
Query: 283 FVISSRAFGQRAVLKYAAHTGATPIAG 363
V+SSR +GQ ++ G + G
Sbjct: 99 LVVSSRQYGQHPARMFSRALGTRAMLG 125
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 46.4 bits (105), Expect = 2e-04
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +1
Query: 115 LAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVIS 294
LAA +G + + ME ++Y R DG +++++++T E+ DP+ V+S
Sbjct: 21 LAAGIRIGTKMKSKFMEPFIYSARPDGLYLLDVKKTDERIRIAAKMIARY-DPSKFVVVS 79
Query: 295 SRAFGQRAVLKYAAHTGATPIAG 363
R +G R V K+ G P+ G
Sbjct: 80 GRQYGHRPVRKFCGLVGCKPMLG 102
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 46.0 bits (104), Expect = 2e-04
Identities = 27/78 (34%), Positives = 38/78 (48%)
Frame = +1
Query: 130 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 309
HL N + Q++ YVYK++ DG +VIN + V SSR G
Sbjct: 1 HLDGTNFDLQIDEYVYKKKRDGMYVIN-----RSFCSQLEPLLPLKTQLMSVVTSSRTTG 55
Query: 310 QRAVLKYAAHTGATPIAG 363
Q+AVL +AA G+ P +G
Sbjct: 56 QQAVLSFAAAVGSAPTSG 73
>UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1; Homo
sapiens|Rep: PREDICTED: similar to 40S ribosomal protein
SA (p40) (34/67 kDa laminin receptor) - Homo sapiens
Length = 99
Score = 45.2 bits (102), Expect = 4e-04
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +1
Query: 61 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQM 162
MSG LD+L + E+D+ +LAA THLG+ N++FQM
Sbjct: 1 MSGILDILPMKEDDILNLLAAGTHLGSPNLDFQM 34
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 40.3 bits (90), Expect = 0.010
Identities = 23/82 (28%), Positives = 38/82 (46%)
Frame = +1
Query: 103 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADV 282
V L A H+G + ME ++++ R DG +V+++ T E+ E P +
Sbjct: 82 VEDYLGAGVHIGTQQKTQDMERFIHRVRTDGLYVLDVSMTDERIRTAADFLSNYE-PEQI 140
Query: 283 FVISSRAFGQRAVLKYAAHTGA 348
SSR +G+ K+A GA
Sbjct: 141 LAASSRQYGRFPAEKFAEAIGA 162
>UniRef50_UPI0000E4908F Cluster: PREDICTED: similar to Ncoa6
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Ncoa6 protein - Strongylocentrotus
purpuratus
Length = 2349
Score = 35.9 bits (79), Expect = 0.22
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -3
Query: 349 LRQCAQHI*AQHAGQMHVMR*QT-HQLDPPRRQQHEQR 239
L+Q QH+ QHA Q H ++ Q HQL + QQH+Q+
Sbjct: 498 LQQLQQHLQQQHAQQQHQLQQQVHHQLQQQQHQQHQQQ 535
>UniRef50_Q8SZ38 Cluster: RE18076p; n=1; Drosophila
melanogaster|Rep: RE18076p - Drosophila melanogaster
(Fruit fly)
Length = 528
Score = 33.9 bits (74), Expect = 0.89
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -1
Query: 255 NSTSSEYKLFPCTPKINYVSTVTTAFINVRLHL 157
N S Y FP PK+ YVS V T+ NV HL
Sbjct: 204 NQYPSIYNKFPSYPKVEYVSVVNTSDANVTQHL 236
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 33.9 bits (74), Expect = 0.89
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 178 KRRGDGTHVINLRRTWEKXXXXXXXXXXX---EDPADVFVISSRAFGQRAVLKYAAHTGA 348
+R+ DG+ I + WEK ++PA++ V+SSR + AVL +A TGA
Sbjct: 12 RRQADGSFSIG--KKWEKIIFAARILATVVTLKNPAEIPVVSSRQYDYCAVLTFAGQTGA 69
Query: 349 TPIA 360
IA
Sbjct: 70 INIA 73
>UniRef50_A2EP33 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 2331
Score = 31.5 bits (68), Expect = 4.8
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = -1
Query: 288 NKHISWILHGDNSTSSEYKLFPCTPKINYVSTVTTAFINVRLHL---EINIFRSQMGGRR 118
N ++ GD+ + K+F C K +S V T I E+NI+R GGR
Sbjct: 1745 NTSTQFVYRGDSDRTINLKIF-CMDKYKQMSNVITNQIEYSTSKSTPELNIYRDLNGGRN 1803
Query: 117 KHLSHIFLAERKQV 76
++ S+ F + K V
Sbjct: 1804 QYDSYRFCEDIKFV 1817
>UniRef50_Q5B561 Cluster: Predicted protein; n=1; Emericella
nidulans|Rep: Predicted protein - Emericella nidulans
(Aspergillus nidulans)
Length = 167
Score = 31.1 bits (67), Expect = 6.3
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 291 DNKHISWILHGDNSTSSEYKLFPCTPKINYVSTV-TTAFINVRLHLEINI 145
D+K+ H +T+ YK P TP ST TT + +RL INI
Sbjct: 35 DDKYDDNDHHSHGNTTEHYKTTPTTPSFPVTSTAPTTRAVVIRLDSSINI 84
>UniRef50_UPI000023E18A Cluster: hypothetical protein FG03950.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG03950.1 - Gibberella zeae PH-1
Length = 861
Score = 30.7 bits (66), Expect = 8.3
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 43 TLTNATMSGGLDLLALSEEDVTKMLAATTHLGA-ENVNFQMETYVYKRRGDGTHVINLRR 219
TL+N G + A +E T + A LG + +N YV+++ GD VI L
Sbjct: 784 TLSNGIAEAGFSVYAATE---TNQVFAVLPLGLIKTLNEHFSFYVWEKCGDDEAVIRLLT 840
Query: 220 TW 225
TW
Sbjct: 841 TW 842
>UniRef50_Q09F96 Cluster: Ymf77; n=1; Tetrahymena malaccensis|Rep:
Ymf77 - Tetrahymena malaccensis
Length = 1294
Score = 30.7 bits (66), Expect = 8.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 258 DNSTSSEYKLFPCTPKINYVSTVTTAFINVRLHLEINI 145
DN+ Y LF KINY++T++ ++ + L INI
Sbjct: 342 DNNNIIMYNLFNINNKINYINTISNKLKSIYIVLLINI 379
>UniRef50_Q7SF05 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 362
Score = 30.7 bits (66), Expect = 8.3
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = -1
Query: 279 ISWILHGDNSTSSEY-KLFPCTPKI 208
++W LHG + TSSE+ KLF PK+
Sbjct: 219 LAWTLHGGDGTSSEFEKLFAVFPKL 243
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,309,373
Number of Sequences: 1657284
Number of extensions: 6457681
Number of successful extensions: 13534
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 13114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13492
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12794443530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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