Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_P12
(293 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E2029A Cluster: PREDICTED: LIM domain binding 2 ... 127 5e-29
UniRef50_O43679 Cluster: LIM domain-binding protein 2; n=83; Eum... 127 5e-29
UniRef50_UPI00015B465B Cluster: PREDICTED: similar to lim domain... 125 2e-28
UniRef50_Q4T633 Cluster: Chromosome undetermined SCAF8962, whole... 113 5e-25
UniRef50_Q86U70 Cluster: LIM domain-binding protein 1; n=20; Eut... 112 1e-24
UniRef50_O18356 Cluster: Short form of CHIP; n=2; Drosophila mel... 108 2e-23
UniRef50_Q17BY7 Cluster: Lim domain binding protein; n=1; Aedes ... 67 8e-11
UniRef50_Q8IU51 Cluster: F58A3.1b; n=5; Caenorhabditis|Rep: F58A... 39 0.018
UniRef50_UPI0000E485B9 Cluster: PREDICTED: hypothetical protein,... 33 0.91
UniRef50_Q1NNA7 Cluster: ATP-binding region, ATPase-like:Histidi... 31 3.7
UniRef50_A5AYN0 Cluster: Putative uncharacterized protein; n=1; ... 31 3.7
UniRef50_Q0C0B8 Cluster: TonB-dependent receptor; n=1; Hyphomona... 31 4.9
UniRef50_Q9ULR3 Cluster: Protein phosphatase 1H; n=22; Euteleost... 30 8.5
>UniRef50_UPI0000E2029A Cluster: PREDICTED: LIM domain binding 2
isoform 1; n=1; Pan troglodytes|Rep: PREDICTED: LIM
domain binding 2 isoform 1 - Pan troglodytes
Length = 344
Score = 127 bits (306), Expect = 5e-29
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2
Query: 107 RRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPNRY 286
RRH PY QP+YR+YE+NKRLQ RTEDSDNLWWDAFATEFFEDDATLTL+FCLEDGP RY
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLWWDAFATEFFEDDATLTLSFCLEDGPKRY 78
Query: 287 TI 292
TI
Sbjct: 79 TI 80
>UniRef50_O43679 Cluster: LIM domain-binding protein 2; n=83;
Eumetazoa|Rep: LIM domain-binding protein 2 - Homo
sapiens (Human)
Length = 373
Score = 127 bits (306), Expect = 5e-29
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2
Query: 107 RRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPNRY 286
RRH PY QP+YR+YE+NKRLQ RTEDSDNLWWDAFATEFFEDDATLTL+FCLEDGP RY
Sbjct: 19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLWWDAFATEFFEDDATLTLSFCLEDGPKRY 78
Query: 287 TI 292
TI
Sbjct: 79 TI 80
>UniRef50_UPI00015B465B Cluster: PREDICTED: similar to lim domain
binding protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to lim domain binding protein -
Nasonia vitripennis
Length = 797
Score = 125 bits (302), Expect = 2e-28
Identities = 54/64 (84%), Positives = 57/64 (89%)
Frame = +2
Query: 101 VDRRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPN 280
V RR PY+ QPDYR YELNKRLQQRTE+SDNLWWDAFA EFFEDDA+LTLTFCLEDGP
Sbjct: 280 VPRRQPPYYQQPDYRFYELNKRLQQRTEESDNLWWDAFANEFFEDDASLTLTFCLEDGPK 339
Query: 281 RYTI 292
RYTI
Sbjct: 340 RYTI 343
>UniRef50_Q4T633 Cluster: Chromosome undetermined SCAF8962, whole
genome shotgun sequence; n=6; Tetraodontidae|Rep:
Chromosome undetermined SCAF8962, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 466
Score = 113 bits (273), Expect = 5e-25
Identities = 49/62 (79%), Positives = 51/62 (82%)
Frame = +2
Query: 107 RRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPNRY 286
RR PY Q DYR+YELNKRLQ TED DNLWWDAF TEFFEDDA LT+TFCLEDGP RY
Sbjct: 81 RRPTPYGNQTDYRIYELNKRLQNWTEDCDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRY 140
Query: 287 TI 292
TI
Sbjct: 141 TI 142
>UniRef50_Q86U70 Cluster: LIM domain-binding protein 1; n=20;
Euteleostomi|Rep: LIM domain-binding protein 1 - Homo
sapiens (Human)
Length = 411
Score = 112 bits (270), Expect = 1e-24
Identities = 47/61 (77%), Positives = 51/61 (83%)
Frame = +2
Query: 110 RHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPNRYT 289
RH PY Q DYR++ELNKRLQ TE+ DNLWWDAF TEFFEDDA LT+TFCLEDGP RYT
Sbjct: 59 RHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYT 118
Query: 290 I 292
I
Sbjct: 119 I 119
>UniRef50_O18356 Cluster: Short form of CHIP; n=2; Drosophila
melanogaster|Rep: Short form of CHIP - Drosophila
melanogaster (Fruit fly)
Length = 365
Score = 108 bits (260), Expect = 2e-23
Identities = 45/62 (72%), Positives = 51/62 (82%)
Frame = +2
Query: 107 RRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPNRY 286
RRH YF ++RV+ELNKRLQQR E+SDN WWD+F TEFFEDDA LT+ FCLEDGP RY
Sbjct: 207 RRHNSYFSHTEHRVFELNKRLQQRNEESDNCWWDSFTTEFFEDDARLTILFCLEDGPKRY 266
Query: 287 TI 292
TI
Sbjct: 267 TI 268
>UniRef50_Q17BY7 Cluster: Lim domain binding protein; n=1; Aedes
aegypti|Rep: Lim domain binding protein - Aedes aegypti
(Yellowfever mosquito)
Length = 579
Score = 66.9 bits (156), Expect = 8e-11
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +2
Query: 134 PDYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPNRYTI 292
P Y+++ELN+RLQ+R ++ WWD F EFF+D ATL+LT EDG + I
Sbjct: 243 PSYKIFELNRRLQERHPQNEGTWWDYFVCEFFDDSATLSLTLRQEDGTKHFNI 295
>UniRef50_Q8IU51 Cluster: F58A3.1b; n=5; Caenorhabditis|Rep:
F58A3.1b - Caenorhabditis elegans
Length = 579
Score = 39.1 bits (87), Expect = 0.018
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Frame = +2
Query: 137 DYRVYELNKRLQ-----QRTEDSDNLWWDAFATEFFEDDATL 247
++R++++N+RL +E+ WWDAF+ EFF+DD L
Sbjct: 50 EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKL 91
>UniRef50_UPI0000E485B9 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 276
Score = 33.5 bits (73), Expect = 0.91
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 104 DRRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFED 235
D RHA +F P R + L +L RT D D++ W FA F E+
Sbjct: 226 DHRHAAFF--PSARGFSLTSKLVGRTIDKDDILW--FAKNFLEN 265
>UniRef50_Q1NNA7 Cluster: ATP-binding region, ATPase-like:Histidine
kinase A-like:Diverse 7TM receptor, transmembrane region
precursor; n=3; delta proteobacterium MLMS-1|Rep:
ATP-binding region, ATPase-like:Histidine kinase
A-like:Diverse 7TM receptor, transmembrane region
precursor - delta proteobacterium MLMS-1
Length = 688
Score = 31.5 bits (68), Expect = 3.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 110 RHAPYFGQPDYRVYELNKRLQQRTEDSDNLW 202
R Y G D R ELN++L+Q ED+ LW
Sbjct: 523 RFTDYLGDIDSRHLELNQQLRQLVEDTRELW 553
>UniRef50_A5AYN0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 329
Score = 31.5 bits (68), Expect = 3.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 158 NKRLQQRTEDSDNLWWD 208
NK++QQ+ ED+DN+W D
Sbjct: 87 NKKMQQKVEDNDNIWCD 103
>UniRef50_Q0C0B8 Cluster: TonB-dependent receptor; n=1; Hyphomonas
neptunium ATCC 15444|Rep: TonB-dependent receptor -
Hyphomonas neptunium (strain ATCC 15444)
Length = 855
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 125 FGQPDYRVYELNKRLQQRTEDSDNLWWDAFATEFFED 235
FG + R Y ++ Q T DSD LWW A A ++ED
Sbjct: 401 FGYIEDRSYSSHELTVQSTTDSD-LWWIAGAYAYYED 436
>UniRef50_Q9ULR3 Cluster: Protein phosphatase 1H; n=22;
Euteleostomi|Rep: Protein phosphatase 1H - Homo sapiens
(Human)
Length = 514
Score = 30.3 bits (65), Expect = 8.5
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 134 PDYRVYELNKRLQQRTED-----SDNLWWDAFATEFFEDDATLTLTFCLEDGPNRYTI 292
P+ R+Y+L+K ++D +D LW D + E + T L C D P+RYT+
Sbjct: 414 PEVRIYDLSK-YDHGSDDVLILATDGLW-DVLSNEEVAEAITQFLPNCDPDDPHRYTL 469
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,552,486
Number of Sequences: 1657284
Number of extensions: 2562760
Number of successful extensions: 7055
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7055
length of database: 575,637,011
effective HSP length: 75
effective length of database: 451,340,711
effective search space used: 9929495642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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