Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_P12
         (293 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   1.0  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   1.8  
AF203336-1|AAF19831.1|  187|Anopheles gambiae immune-responsive ...    21   9.6  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    21   9.6  

>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 227 FEDDATLTLTFCLEDGPNRYT 289
           F D   LT+  CL   PNR T
Sbjct: 223 FSDHKALTVRLCLPTPPNRLT 243


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 125 FGQPDYRVYELNKRLQQRTEDSDNL 199
           FG   Y  Y ++ R  Q+T DSDN+
Sbjct: 166 FGSWTYDGYMVDLRHLQQTPDSDNI 190


>AF203336-1|AAF19831.1|  187|Anopheles gambiae immune-responsive
           chymotrypsin-likeserine protease-related protein ISPR1
           protein.
          Length = 187

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 212 FATEFFEDDATLTLT 256
           F TE   ++ATLTLT
Sbjct: 160 FTTETVPENATLTLT 174


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 235 VLEELRRECV 206
           V+EELR EC+
Sbjct: 316 VIEELRNECI 325


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,578
Number of Sequences: 2352
Number of extensions: 2583
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 18253998
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)