Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_P12
(293 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical pr... 39 5e-04
Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical pr... 39 5e-04
Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical pr... 39 5e-04
U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein. 39 5e-04
U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein. 39 5e-04
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr... 28 1.3
AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical ... 27 2.3
Z93378-5|CAB07584.3| 1229|Caenorhabditis elegans Hypothetical pr... 26 5.4
AJ811574-1|CAH18872.1| 1229|Caenorhabditis elegans putative treh... 26 5.4
AJ512333-1|CAD54507.2| 1230|Caenorhabditis elegans trehalose-6-p... 26 5.4
U80439-7|AAB37644.1| 344|Caenorhabditis elegans Hypothetical pr... 25 7.1
U64854-4|AAB18314.1| 308|Caenorhabditis elegans Hypothetical pr... 25 9.4
>Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical
protein F58A3.1c protein.
Length = 629
Score = 39.1 bits (87), Expect = 5e-04
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Frame = +2
Query: 137 DYRVYELNKRLQ-----QRTEDSDNLWWDAFATEFFEDDATL 247
++R++++N+RL +E+ WWDAF+ EFF+DD L
Sbjct: 100 EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKL 141
>Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical
protein F58A3.1b protein.
Length = 578
Score = 39.1 bits (87), Expect = 5e-04
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Frame = +2
Query: 137 DYRVYELNKRLQ-----QRTEDSDNLWWDAFATEFFEDDATL 247
++R++++N+RL +E+ WWDAF+ EFF+DD L
Sbjct: 49 EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKL 90
>Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical
protein F58A3.1a protein.
Length = 592
Score = 39.1 bits (87), Expect = 5e-04
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Frame = +2
Query: 137 DYRVYELNKRLQ-----QRTEDSDNLWWDAFATEFFEDDATL 247
++R++++N+RL +E+ WWDAF+ EFF+DD L
Sbjct: 63 EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKL 104
>U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein.
Length = 579
Score = 39.1 bits (87), Expect = 5e-04
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Frame = +2
Query: 137 DYRVYELNKRLQ-----QRTEDSDNLWWDAFATEFFEDDATL 247
++R++++N+RL +E+ WWDAF+ EFF+DD L
Sbjct: 50 EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKL 91
>U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein.
Length = 592
Score = 39.1 bits (87), Expect = 5e-04
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Frame = +2
Query: 137 DYRVYELNKRLQ-----QRTEDSDNLWWDAFATEFFEDDATL 247
++R++++N+RL +E+ WWDAF+ EFF+DD L
Sbjct: 63 EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKL 104
>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
protein C50F2.2 protein.
Length = 1029
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 137 DYRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTL 253
D YE+ + L+ +T ++ W F E +DD TL
Sbjct: 744 DVEAYEITEDLESQTYEASQSDWKEFCLEDVDDDVDETL 782
>AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical
protein Y37E3.8a protein.
Length = 145
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 104 DRRHAPYFGQPDYRVYELNKRLQQ-RTEDSDNLW 202
D+ H YFG+ RV+ LNK T + + LW
Sbjct: 46 DKYHPGYFGKVGMRVFHLNKNQHYCPTVNVERLW 79
>Z93378-5|CAB07584.3| 1229|Caenorhabditis elegans Hypothetical
protein F19H8.1 protein.
Length = 1229
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 121 IFRPTRLQSLRTQQAVTTKDRRFR*SMVGRIRDGV 225
+ RPT++++L ++ K R R +VGR+ G+
Sbjct: 794 VIRPTQVETLDDFFSLMMKTRNVRRQIVGRVLKGI 828
>AJ811574-1|CAH18872.1| 1229|Caenorhabditis elegans putative
trehalose 6-phosphatesynthase protein.
Length = 1229
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 121 IFRPTRLQSLRTQQAVTTKDRRFR*SMVGRIRDGV 225
+ RPT++++L ++ K R R +VGR+ G+
Sbjct: 794 VIRPTQVETLDDFFSLMMKTRNVRRQIVGRVLKGI 828
>AJ512333-1|CAD54507.2| 1230|Caenorhabditis elegans
trehalose-6-phosphate synthase protein.
Length = 1230
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 121 IFRPTRLQSLRTQQAVTTKDRRFR*SMVGRIRDGV 225
+ RPT++++L ++ K R R +VGR+ G+
Sbjct: 794 VIRPTQVETLDDFFSLMMKTRNVRRQIVGRVLKGI 828
>U80439-7|AAB37644.1| 344|Caenorhabditis elegans Hypothetical
protein C01G8.6 protein.
Length = 344
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 129 ANQTTEFTNSTSGYNKGQKIQIIYGGTH 212
A + FT ST G G KI +IY G+H
Sbjct: 2 AESSVTFTISTDG---GGKINVIYDGSH 26
>U64854-4|AAB18314.1| 308|Caenorhabditis elegans Hypothetical
protein K11C4.1 protein.
Length = 308
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2
Query: 107 RRHAPYFGQPDYRVYELNKRLQQRTEDSDNLWW 205
RR APY G P Y + R + +D W+
Sbjct: 181 RRKAPYRGTPRYAPIASHNRAEHGRKDDVESWF 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,416,403
Number of Sequences: 27780
Number of extensions: 59933
Number of successful extensions: 172
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 291481146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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