Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_P11
(279 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VCX3 Cluster: Probable 39S ribosomal protein L45, mit... 50 8e-06
UniRef50_UPI000051A99B Cluster: PREDICTED: similar to mitochondr... 40 0.008
UniRef50_A0EIM7 Cluster: Chromosome undetermined scaffold_99, wh... 33 1.2
UniRef50_Q23R03 Cluster: Cyclic nucleotide-binding domain contai... 32 2.1
UniRef50_Q6MCG6 Cluster: Putative uncharacterized protein; n=4; ... 31 3.8
UniRef50_Q23R06 Cluster: Cyclic nucleotide-binding domain contai... 31 3.8
UniRef50_A6RQD1 Cluster: Putative uncharacterized protein; n=2; ... 31 5.0
UniRef50_UPI0000EBC3EF Cluster: PREDICTED: similar to LimA; n=2;... 31 6.6
UniRef50_A6CEE7 Cluster: Putative uncharacterized protein; n=1; ... 30 8.7
UniRef50_A4C3T8 Cluster: Putative uncharacterized protein; n=1; ... 30 8.7
UniRef50_A3ZUI1 Cluster: Probable protein kinase yloP-putative s... 30 8.7
UniRef50_Q5KMW1 Cluster: Gamma DNA-directed DNA polymerase, puta... 30 8.7
UniRef50_Q8R936 Cluster: Probable protease htpX homolog; n=3; Th... 30 8.7
>UniRef50_Q9VCX3 Cluster: Probable 39S ribosomal protein L45,
mitochondrial precursor; n=6; Coelomata|Rep: Probable
39S ribosomal protein L45, mitochondrial precursor -
Drosophila melanogaster (Fruit fly)
Length = 361
Score = 50.4 bits (115), Expect = 8e-06
Identities = 22/54 (40%), Positives = 37/54 (68%)
Frame = +1
Query: 118 LICHQQSRNTTSKHYNPKFKKERAQKYLNLDLPDPNEDVTNMTAEKIRQKMKEK 279
LI QQ R+ +KH+ P+FK+ R K++ +DLP+ E ++T E++R +MKE+
Sbjct: 41 LIQMQQVRHRQTKHWKPEFKRLRKLKFVKMDLPNLREKQEDITKEEMRSRMKER 94
>UniRef50_UPI000051A99B Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L45 CG6949-PA; n=1; Apis
mellifera|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L45 CG6949-PA - Apis mellifera
Length = 332
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/48 (35%), Positives = 32/48 (66%)
Frame = +1
Query: 133 QSRNTTSKHYNPKFKKERAQKYLNLDLPDPNEDVTNMTAEKIRQKMKE 276
Q + KH+N K++KER QK++ ++LP+ N+ + ++IR +MK+
Sbjct: 34 QQIRSIKKHFNQKYRKERGQKFIKIELPNYNQ--PELGNDEIRLQMKK 79
>UniRef50_A0EIM7 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 583
Score = 33.1 bits (72), Expect = 1.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 33 YVLHFHYIFNNNGKYCTFEVCVSSPN 110
+V+ Y+ N KYCT E+C+ PN
Sbjct: 96 FVMGMPYLLQNPSKYCTDEICIEYPN 121
>UniRef50_Q23R03 Cluster: Cyclic nucleotide-binding domain
containing protein; n=2; Tetrahymena thermophila
SB210|Rep: Cyclic nucleotide-binding domain containing
protein - Tetrahymena thermophila SB210
Length = 1254
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +1
Query: 58 SIIMANTVLSKFVSLRLTPVLICHQQSRNTTSKHYNPKFKKERAQKYLNLDLPDPNEDVT 237
S + ++K ++ R + +Q +NT K K ++ QK LD+PD NE +
Sbjct: 217 SFLCNQNTINKAINQRRRSSRMQVEQFQNTLLKMIQDKTSNQQEQKQKMLDIPDQNETLQ 276
Query: 238 NMTAEK 255
EK
Sbjct: 277 TQEQEK 282
>UniRef50_Q6MCG6 Cluster: Putative uncharacterized protein; n=4;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative uncharacterized protein - Protochlamydia
amoebophila (strain UWE25)
Length = 936
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 121 ICHQQSRNTTSKHYNPKFKKERAQKYLNLDLPDPNE 228
I HQ+ N K YN K K+ K LNLD+ N+
Sbjct: 169 ILHQRLNNINKKSYNDKLKELEGLKRLNLDIEAINK 204
>UniRef50_Q23R06 Cluster: Cyclic nucleotide-binding domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Cyclic nucleotide-binding domain containing
protein - Tetrahymena thermophila SB210
Length = 1070
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 130 QQSRNTTSKHYNPKFKKERAQKYLNLDLPDPNEDVTNMTAEKIRQK 267
+Q +NT K K ++ QK LD+PD NE + EK + K
Sbjct: 198 EQFQNTLLKMIQDKTSNQQEQKQKMLDIPDQNETLQTQELEKSQIK 243
>UniRef50_A6RQD1 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 1364
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 139 RNTTSKHYNPKFKKERAQKYLNLDLPDPNEDVTNMTAEKIRQ 264
RN S H +P+ K++R +YL+ + + E MTA IRQ
Sbjct: 1113 RNAPSNHGDPRTKRQRTNEYLD-EEDELTESHPKMTAPPIRQ 1153
>UniRef50_UPI0000EBC3EF Cluster: PREDICTED: similar to LimA; n=2;
Bos taurus|Rep: PREDICTED: similar to LimA - Bos taurus
Length = 382
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +3
Query: 42 HFHYIFNNNGKYCTFEVCVSSPNPSADM---PPTISQYHLKA 158
H+H++ NN +SSP P M PP+ Q+H A
Sbjct: 238 HYHHLITNNTHQHVSTTIISSPTPPVSMSALPPSHRQHHQSA 279
>UniRef50_A6CEE7 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 595
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 206 KLRYFCALSFLNFGL*CFEVVLRDCWWHISTG 111
+LR+ L F + CF + D WWH+ TG
Sbjct: 50 ELRFLSLLLIWTFLVACFPLRNMDIWWHLRTG 81
>UniRef50_A4C3T8 Cluster: Putative uncharacterized protein; n=1;
Pseudoalteromonas tunicata D2|Rep: Putative
uncharacterized protein - Pseudoalteromonas tunicata D2
Length = 49
Score = 30.3 bits (65), Expect = 8.7
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -2
Query: 266 FCLIFSAVILVTSSFGSGRSKLRYFCALSFLNFGL*CFEVVL 141
FC IFS +I+ +S+ G + F ALS FGL +V L
Sbjct: 6 FCFIFSQLIVFCTSYKVGGIIITLFIALSEFYFGLKVCDVFL 47
>UniRef50_A3ZUI1 Cluster: Probable protein kinase yloP-putative
serine/threonine protein kinase; n=1; Blastopirellula
marina DSM 3645|Rep: Probable protein kinase
yloP-putative serine/threonine protein kinase -
Blastopirellula marina DSM 3645
Length = 951
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 142 NTTSKHYNPKFKKERAQKYLNLDLPDPNEDVTNMTAEKIRQKMK 273
N HY P+ + + Y+ + D ED+ T ++IRQ+M+
Sbjct: 5 NIAPGHYRPRCRNCKELFYIGVPSADAVEDIVVKTLQEIRQEMR 48
>UniRef50_Q5KMW1 Cluster: Gamma DNA-directed DNA polymerase,
putative; n=2; Filobasidiella neoformans|Rep: Gamma
DNA-directed DNA polymerase, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 1376
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 151 RWYCEIVGGISALGLGEETQTSKVQYLPLLLNI 53
+WY ++ G +S L +GE T K PLLL +
Sbjct: 773 KWYWDLTGPVSRLPVGELDLTCKKTIAPLLLRL 805
>UniRef50_Q8R936 Cluster: Probable protease htpX homolog; n=3;
Thermoanaerobacter|Rep: Probable protease htpX homolog -
Thermoanaerobacter tengcongensis
Length = 299
Score = 30.3 bits (65), Expect = 8.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 152 EVVLRDCWWHISTGVRRRDTNFESTVFAIIIEYIMKV 42
+V LR WW I G RRRD N + ++I I+ +
Sbjct: 174 DVFLRSMWWGIG-GERRRDKNDNLGIILLLIGLILSI 209
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 283,356,959
Number of Sequences: 1657284
Number of extensions: 5480626
Number of successful extensions: 16457
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16451
length of database: 575,637,011
effective HSP length: 70
effective length of database: 459,627,131
effective search space used: 10111796882
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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